Gene annotation
Transcriptome id Sobic.001G268850.1
Synonym -
Functional annotation -
UniProt A0A1Z5S7R5
Pfam PF01074
Panther DB PTHR11607 PTHR11607:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004559alpha-mannosidase activity


Orthologs (automatic annotation)
TAIR AT5G66150 : Glycosyl hydrolase family 38 protein
RAP-DB (Rice) LOC_Os10g05069.1 : lysosomal alpha-mannosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003725 , Zm00025a003741 , Zm00025a003751
Brachypodium -
Barley HORVU5Hr1G113880.38 , HORVU5Hr1G113880.34 , HORVU5Hr1G113880.30 , HORVU5Hr1G113880.32 , HORVU5Hr1G113880.33 , HORVU5Hr1G113880.4 , HORVU5Hr1G113880.7 , HORVU5Hr1G113880.1 , HORVU5Hr1G113880.2 , HORVU5Hr1G113880.3 , HORVU5Hr1G113880.8 , HORVU5Hr1G113880.9 , HORVU5Hr1G113880.29 , HORVU5Hr1G113880.27 , HORVU5Hr1G113880.26 , HORVU5Hr1G113880.25 , HORVU5Hr1G113880.23 , HORVU5Hr1G113880.21 , HORVU5Hr1G113880.20 , HORVU5Hr1G113880.16 , HORVU5Hr1G113880.17 , HORVU5Hr1G113880.14 , HORVU5Hr1G113880.13 , HORVU5Hr1G113880.18
Wheat TraesCS5D02G496800 , TraesCS5D02G496800 , TraesCS5A02G483300 , TraesCS5B02G496400 , TraesCS5B02G496400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G055300 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
2 Sobic.001G269000 lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
3 Sobic.001G206200 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K00218: protochlorophyllide reductase
4 Sobic.009G165200 plant-specific domain TIGR01589 family protein, expressed -
5 Sobic.002G338000 Chorophyll a/b binding protein CP29.1(PubMedID : 26186930)@Chlorophyll A-B binding protein CP29 LHCB4 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B4(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08915: light-harvesting complex II chlorophyll a/b binding protein 4
6 Sobic.002G289100 chlorophyll A-B binding protein, putative, expressed -
7 Sobic.002G352100 Chorophyll a/b binding protein 7(PubMedID : 26186930)@Chlorophyll a-b binding protein (At)(PubMedID : 27208977)@Chlorophyll binding protein LHCA2 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
8 Sobic.010G000500 Plastocyanin(PubMedID : 26186930)@plastocyanin, chloroplast precursor, putative, expressed K02638: plastocyanin
9 Sobic.002G414400 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
10 Sobic.010G146100 aquaporin protein, putative, expressed K09873: aquaporin TIP
11 Sobic.003G369000 - -
12 Sobic.004G068350 - -
13 Sobic.005G152600 - -
14 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
15 Sobic.001G066600 mTERF domain containing protein, expressed -
16 Sobic.005G087000 Chorophyll a/b binding protein CP26(PubMedID : 26186930)@Light harvesting complex PSII subunit 5 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B5(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08916: light-harvesting complex II chlorophyll a/b binding protein 5
17 Sobic.001G046900 Photosystem I reaction center subunit II(PubMedID : 26186930)@photosystem I subunit D-1(PubMedID : 26465154)@photosystem I subunit D-1(PubMedID : 26465154)@Photosystem I subunit D(PubMedID : 29017446)@photosystem I reaction center subunit II, chloroplast precursor, putative, expressed K02692: photosystem I subunit II
18 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
19 Sobic.002G030200 Photosystem II subunit P(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
20 Sobic.007G136900 Chorophyll a/b binding protein 4(PubMedID : 26186930)@Light harvesting complex PSI subunit A4 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08910: light-harvesting complex I chlorophyll a/b binding protein 4


Gene co-expression network
sample Sobic001G268850 Sobic001G268850 Sobic003G055300 Sobic003G055300 Sobic001G268850--Sobic003G055300 Sobic001G269000 Sobic001G269000 Sobic001G268850--Sobic001G269000 Sobic001G206200 Sobic001G206200 Sobic001G268850--Sobic001G206200 Sobic009G165200 Sobic009G165200 Sobic001G268850--Sobic009G165200 Sobic002G338000 Sobic002G338000 Sobic001G268850--Sobic002G338000 Sobic002G289100 Sobic002G289100 Sobic001G268850--Sobic002G289100 Sobic002G352100 Sobic002G352100 Sobic001G268850--Sobic002G352100 Sobic010G000500 Sobic010G000500 Sobic001G268850--Sobic010G000500 Sobic002G414400 Sobic002G414400 Sobic001G268850--Sobic002G414400 Sobic003G055300--Sobic002G338000 Sobic003G055300--Sobic001G206200 Sobic003G055300--Sobic010G000500 Sobic002G030200 Sobic002G030200 Sobic003G055300--Sobic002G030200 Sobic001G046900 Sobic001G046900 Sobic003G055300--Sobic001G046900 Sobic003G055300--Sobic002G352100 Sobic005G087000 Sobic005G087000 Sobic003G055300--Sobic005G087000 Sobic009G229700 Sobic009G229700 Sobic003G055300--Sobic009G229700 Sobic002G242000 Sobic002G242000 Sobic003G055300--Sobic002G242000 Sobic001G269000--Sobic001G268850 Sobic010G134200 Sobic010G134200 Sobic001G269000--Sobic010G134200 Sobic002G093500 Sobic002G093500 Sobic001G269000--Sobic002G093500 Sobic001G269000--Sobic003G055300 Sobic001G269000--Sobic001G206200 Sobic001G269000--Sobic002G338000 Sobic001G269000--Sobic010G000500 Sobic010G109400 Sobic010G109400 Sobic001G269000--Sobic010G109400 Sobic001G269000--Sobic005G087000 Sobic001G206200--Sobic002G338000 Sobic001G206200--Sobic003G055300 Sobic001G206200--Sobic010G000500 Sobic001G206200--Sobic002G414400 Sobic001G206200--Sobic002G030200 Sobic009G234600 Sobic009G234600 Sobic001G206200--Sobic009G234600 Sobic004G234200 Sobic004G234200 Sobic001G206200--Sobic004G234200 Sobic001G206200--Sobic001G046900 Sobic002G329600 Sobic002G329600 Sobic001G206200--Sobic002G329600 Sobic009G165200--Sobic002G352100 Sobic009G165200--Sobic009G229700 Sobic009G165200--Sobic005G087000 Sobic005G152600 Sobic005G152600 Sobic009G165200--Sobic005G152600 Sobic010G189300 Sobic010G189300 Sobic009G165200--Sobic010G189300 Sobic001G066600 Sobic001G066600 Sobic009G165200--Sobic001G066600 Sobic009G165200--Sobic003G055300 Sobic009G165200--Sobic001G046900 Sobic006G073500 Sobic006G073500 Sobic009G165200--Sobic006G073500 Sobic002G338000--Sobic010G000500 Sobic002G338000--Sobic003G055300 Sobic002G338000--Sobic001G206200 Sobic002G338000--Sobic002G030200 Sobic002G338000--Sobic001G046900 Sobic002G338000--Sobic002G352100 Sobic002G338000--Sobic002G414400 Sobic001G177000 Sobic001G177000 Sobic002G338000--Sobic001G177000 Sobic002G338000--Sobic009G234600 Sobic002G288300 Sobic002G288300 Sobic002G289100--Sobic002G288300 Sobic002G289100--Sobic002G352100 Sobic002G289100--Sobic002G338000 Sobic002G289100--Sobic003G055300 Sobic002G289100--Sobic010G000500 Sobic002G289100--Sobic001G206200 Sobic002G289100--Sobic002G414400 Sobic002G289100--Sobic001G268850 Sobic002G289100--Sobic009G165200 Sobic002G352100--Sobic001G046900 Sobic007G136900 Sobic007G136900 Sobic002G352100--Sobic007G136900 Sobic002G352100--Sobic010G189300 Sobic002G352100--Sobic002G338000 Sobic002G352100--Sobic005G087000 Sobic002G352100--Sobic003G055300 Sobic002G352100--Sobic009G165200 Sobic002G352100--Sobic009G229700 Sobic004G235200 Sobic004G235200 Sobic002G352100--Sobic004G235200 Sobic010G000500--Sobic002G338000 Sobic010G000500--Sobic002G030200 Sobic010G000500--Sobic003G055300 Sobic010G000500--Sobic001G206200 Sobic010G000500--Sobic009G234600 Sobic006G264900 Sobic006G264900 Sobic010G000500--Sobic006G264900 Sobic010G000500--Sobic001G046900 Sobic010G000500--Sobic002G414400 Sobic010G000500--Sobic001G177000 Sobic002G414400--Sobic002G338000 Sobic002G414400--Sobic010G000500 Sobic002G414400--Sobic001G206200 Sobic004G193400 Sobic004G193400 Sobic002G414400--Sobic004G193400 Sobic002G414400--Sobic002G030200 Sobic002G414400--Sobic004G234200 Sobic002G414400--Sobic003G055300 Sobic002G297300 Sobic002G297300 Sobic002G414400--Sobic002G297300 Sobic002G414400--Sobic002G288300
Octagon: transcription factors


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