Gene annotation
Transcriptome id Sobic.001G269000.1,Sobic.001G269000.2
Synonym Sb01g026405
Functional annotation lysosomal alpha-mannosidase precursor, putative, expressed
UniProt A0A1Z5S820 , A0A1Z5S7T2
Pfam PF09261 PF01074 PF07748
Panther DB PTHR11607 PTHR11607:SF18
NCBI CDD -
KEGG Orthology K01191; alpha-mannosidase
Gene Ontology GO:0008270; zinc ion binding GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0005975carbohydrate metabolic process GO:0004559alpha-mannosidase activity GO:0015923mannosidase activity GO:0006013mannose metabolic process


Orthologs (automatic annotation)
TAIR AT5G66150 : Glycosyl hydrolase family 38 protein
RAP-DB (Rice) LOC_Os10g05069.2 : lysosomal alpha-mannosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003725 , Zm00025a003751 , Zm00025a003741
Brachypodium KQJ96121
Barley -
Wheat TraesCS1B02G106400 , TraesCS1B02G106400 , TraesCS1A02G087500 , TraesCS1A02G087500 , TraesCS1D02G088800 , TraesCS1D02G088800
Populus PNT04841 , PNT04838


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cDNA sequences
Sobic.001G269000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G268850 - -
2 Sobic.010G134200 peroxiredoxin, putative, expressed -
3 Sobic.002G093500 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
4 Sobic.003G055300 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
5 Sobic.001G206200 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K00218: protochlorophyllide reductase
6 Sobic.002G338000 Chorophyll a/b binding protein CP29.1(PubMedID : 26186930)@Chlorophyll A-B binding protein CP29 LHCB4 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B4(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08915: light-harvesting complex II chlorophyll a/b binding protein 4
7 Sobic.010G000500 Plastocyanin(PubMedID : 26186930)@plastocyanin, chloroplast precursor, putative, expressed K02638: plastocyanin
8 Sobic.010G109400 acylphosphatase, putative, expressed K01512: acylphosphatase
9 Sobic.005G087000 Chorophyll a/b binding protein CP26(PubMedID : 26186930)@Light harvesting complex PSII subunit 5 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B5(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08916: light-harvesting complex II chlorophyll a/b binding protein 5
10 Sobic.005G152600 - -
11 Sobic.002G030200 Photosystem II subunit P(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
12 Sobic.005G042000 Ribulose bisphosphate carboxylase small chain(PubMedID : 26186930)@rubisco small subunit 1A(PubMedID : 26317421)@RuBisCO small chain (Os)(PubMedID : 27208977)@-(PubMedID : 26976818)@CO2 fixation reaction(PubMedID : 21562335)@ribulose bisphosphate carboxylase small chain, chloroplast precursor, putative, expressed K01602: ribulose-bisphosphate carboxylase small chain
13 Sobic.009G229700 Photosystem I reaction center subunit VI(PubMedID : 26186930)@expressed protein K02695: photosystem I subunit VI
14 Sobic.004G023700 N-dimethylguanosine tRNA methyltransferase, putative, expressed K00555: TRMT1, tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase
15 Sobic.001G046900 Photosystem I reaction center subunit II(PubMedID : 26186930)@photosystem I subunit D-1(PubMedID : 26465154)@photosystem I subunit D-1(PubMedID : 26465154)@Photosystem I subunit D(PubMedID : 29017446)@photosystem I reaction center subunit II, chloroplast precursor, putative, expressed K02692: photosystem I subunit II
16 Sobic.002G352100 Chorophyll a/b binding protein 7(PubMedID : 26186930)@Chlorophyll a-b binding protein (At)(PubMedID : 27208977)@Chlorophyll binding protein LHCA2 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
17 Sobic.002G414400 -(PubMedID : 29017446)@ultraviolet-B-repressible protein, putative, expressed -
18 Sobic.009G234600 Chorophyll a/b binding protein M9(PubMedID : 26186930)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
19 Sobic.009G165200 plant-specific domain TIGR01589 family protein, expressed -
20 Sobic.002G329600 Oxygen-evolving enhancer protein 3-1(PubMedID : 26186930)@Ferredoxin-NADP reductase-binding protein (Zm)(PubMedID : 27208977)@-(PubMedID : 29017446)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3


Gene co-expression network
sample Sobic001G269000 Sobic001G269000 Sobic001G268850 Sobic001G268850 Sobic001G269000--Sobic001G268850 Sobic010G134200 Sobic010G134200 Sobic001G269000--Sobic010G134200 Sobic002G093500 Sobic002G093500 Sobic001G269000--Sobic002G093500 Sobic003G055300 Sobic003G055300 Sobic001G269000--Sobic003G055300 Sobic001G206200 Sobic001G206200 Sobic001G269000--Sobic001G206200 Sobic002G338000 Sobic002G338000 Sobic001G269000--Sobic002G338000 Sobic010G000500 Sobic010G000500 Sobic001G269000--Sobic010G000500 Sobic010G109400 Sobic010G109400 Sobic001G269000--Sobic010G109400 Sobic005G087000 Sobic005G087000 Sobic001G269000--Sobic005G087000 Sobic001G268850--Sobic003G055300 Sobic001G268850--Sobic001G269000 Sobic001G268850--Sobic001G206200 Sobic009G165200 Sobic009G165200 Sobic001G268850--Sobic009G165200 Sobic001G268850--Sobic002G338000 Sobic002G289100 Sobic002G289100 Sobic001G268850--Sobic002G289100 Sobic002G352100 Sobic002G352100 Sobic001G268850--Sobic002G352100 Sobic001G268850--Sobic010G000500 Sobic002G414400 Sobic002G414400 Sobic001G268850--Sobic002G414400 Sobic010G134200--Sobic010G109400 Sobic010G134200--Sobic002G093500 Sobic010G134200--Sobic001G269000 Sobic009G113400 Sobic009G113400 Sobic010G134200--Sobic009G113400 Sobic003G421000 Sobic003G421000 Sobic010G134200--Sobic003G421000 Sobic004G183100 Sobic004G183100 Sobic010G134200--Sobic004G183100 Sobic007G023300 Sobic007G023300 Sobic010G134200--Sobic007G023300 Sobic003G065400 Sobic003G065400 Sobic010G134200--Sobic003G065400 Sobic001G438100 Sobic001G438100 Sobic010G134200--Sobic001G438100 Sobic002G093500--Sobic010G134200 Sobic001G467700 Sobic001G467700 Sobic002G093500--Sobic001G467700 Sobic002G093500--Sobic001G269000 Sobic008G073400 Sobic008G073400 Sobic002G093500--Sobic008G073400 Sobic001G407900 Sobic001G407900 Sobic002G093500--Sobic001G407900 Sobic002G093500--Sobic001G268850 Sobic007G178500 Sobic007G178500 Sobic002G093500--Sobic007G178500 Sobic003G106500 Sobic003G106500 Sobic002G093500--Sobic003G106500 Sobic002G093500--Sobic007G023300 Sobic003G055300--Sobic002G338000 Sobic003G055300--Sobic001G206200 Sobic003G055300--Sobic010G000500 Sobic002G030200 Sobic002G030200 Sobic003G055300--Sobic002G030200 Sobic001G046900 Sobic001G046900 Sobic003G055300--Sobic001G046900 Sobic003G055300--Sobic002G352100 Sobic003G055300--Sobic005G087000 Sobic009G229700 Sobic009G229700 Sobic003G055300--Sobic009G229700 Sobic002G242000 Sobic002G242000 Sobic003G055300--Sobic002G242000 Sobic001G206200--Sobic002G338000 Sobic001G206200--Sobic003G055300 Sobic001G206200--Sobic010G000500 Sobic001G206200--Sobic002G414400 Sobic001G206200--Sobic002G030200 Sobic009G234600 Sobic009G234600 Sobic001G206200--Sobic009G234600 Sobic004G234200 Sobic004G234200 Sobic001G206200--Sobic004G234200 Sobic001G206200--Sobic001G046900 Sobic002G329600 Sobic002G329600 Sobic001G206200--Sobic002G329600 Sobic002G338000--Sobic010G000500 Sobic002G338000--Sobic003G055300 Sobic002G338000--Sobic001G206200 Sobic002G338000--Sobic002G030200 Sobic002G338000--Sobic001G046900 Sobic002G338000--Sobic002G352100 Sobic002G338000--Sobic002G414400 Sobic001G177000 Sobic001G177000 Sobic002G338000--Sobic001G177000 Sobic002G338000--Sobic009G234600 Sobic010G000500--Sobic002G338000 Sobic010G000500--Sobic002G030200 Sobic010G000500--Sobic003G055300 Sobic010G000500--Sobic001G206200 Sobic010G000500--Sobic009G234600 Sobic006G264900 Sobic006G264900 Sobic010G000500--Sobic006G264900 Sobic010G000500--Sobic001G046900 Sobic010G000500--Sobic002G414400 Sobic010G000500--Sobic001G177000 Sobic010G109400--Sobic010G134200 Sobic010G109400--Sobic009G113400 Sobic001G032200 Sobic001G032200 Sobic010G109400--Sobic001G032200 Sobic002G138300 Sobic002G138300 Sobic010G109400--Sobic002G138300 Sobic010G109400--Sobic003G421000 Sobic010G109400--Sobic001G269000 Sobic004G162500 Sobic004G162500 Sobic010G109400--Sobic004G162500 Sobic004G351400 Sobic004G351400 Sobic010G109400--Sobic004G351400 Sobic004G023700 Sobic004G023700 Sobic010G109400--Sobic004G023700 Sobic006G073500 Sobic006G073500 Sobic005G087000--Sobic006G073500 Sobic005G087000--Sobic009G229700 Sobic005G087000--Sobic001G046900 Sobic002G033900 Sobic002G033900 Sobic005G087000--Sobic002G033900 Sobic004G235200 Sobic004G235200 Sobic005G087000--Sobic004G235200 Sobic010G241000 Sobic010G241000 Sobic005G087000--Sobic010G241000 Sobic005G087000--Sobic002G352100 Sobic005G087000--Sobic009G234600 Sobic005G042000 Sobic005G042000 Sobic005G087000--Sobic005G042000
Octagon: transcription factors


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