Gene annotation
Transcriptome id Sobic.002G093500.1
Synonym Sb02g007730, ILR1
Functional annotation hydrolase, putative, expressed
UniProt C5X249
Pfam PF07687 PF01546
Panther DB PTHR11014 PTHR11014:SF103
NCBI CDD -
KEGG Orthology K14664; IAA-amino acid hydrolase
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G02875 : Peptidase M20/M25/M40 family protein
RAP-DB (Rice) LOC_Os07g14590.1 : hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a019501 , Zm00025a016369 , Zm00025a045526
Brachypodium KQK20241 , KQK20242
Barley HORVU5Hr1G055060.2 , HORVU5Hr1G055060.7 , HORVU5Hr1G055060.6 , HORVU5Hr1G055060.9 , HORVU5Hr1G055060.8 , HORVU5Hr1G027710.16 , HORVU5Hr1G027710.12 , HORVU5Hr1G027710.13 , HORVU5Hr1G027710.10 , HORVU5Hr1G027710.11 , HORVU5Hr1G027710.5 , HORVU5Hr1G027710.6 , HORVU5Hr1G027710.7 , HORVU5Hr1G027710.1 , HORVU5Hr1G027710.2 , HORVU5Hr1G027710.3 , HORVU5Hr1G027710.8 , HORVU5Hr1G027710.9
Wheat TraesCS5B02G178100 , TraesCS5D02G113000 , TraesCS5A02G180200 , TraesCS5D02G184700 , TraesCS5A02G100500 , TraesCS5A02G100500 , TraesCS5B02G105600 , TraesCS5B02G105600
Populus -


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cDNA sequences
Sobic.002G093500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134200 peroxiredoxin, putative, expressed -
2 Sobic.001G467700 arginyl-tRNA synthetase, putative, expressed -
3 Sobic.001G269000 lysosomal alpha-mannosidase precursor, putative, expressed K01191: alpha-mannosidase
4 Sobic.008G073400 B-box (BBX) protein(PubMedID : 30626335)@down-regulated TF in developmental senescence(PubMedID : 27586543)@B-box zinc finger family protein, putative, expressed -
5 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
6 Sobic.001G268850 - -
7 Sobic.007G178500 cytochrome P450, putative, expressed -
8 Sobic.003G106500 expressed protein -
9 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
10 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
11 Sobic.010G109400 acylphosphatase, putative, expressed K01512: acylphosphatase
12 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
13 Sobic.005G021600 expressed protein -
14 Sobic.001G042301 - -
15 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
16 Sobic.002G384400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FAD dependent oxidoreductase domain containing protein, expressed K03146: THI4, cysteine-dependent adenosine diphosphate thiazole synthase
17 Sobic.002G175400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@desaturase/cytochrome b5 protein, putative, expressed K13076: sphingolipid 8-(E)-desaturase
18 Sobic.003G065400 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.007G132500 F-box domain containing protein, expressed -
20 Sobic.010G089200 expressed protein -


Gene co-expression network
sample Sobic002G093500 Sobic002G093500 Sobic010G134200 Sobic010G134200 Sobic002G093500--Sobic010G134200 Sobic001G467700 Sobic001G467700 Sobic002G093500--Sobic001G467700 Sobic001G269000 Sobic001G269000 Sobic002G093500--Sobic001G269000 Sobic008G073400 Sobic008G073400 Sobic002G093500--Sobic008G073400 Sobic001G407900 Sobic001G407900 Sobic002G093500--Sobic001G407900 Sobic001G268850 Sobic001G268850 Sobic002G093500--Sobic001G268850 Sobic007G178500 Sobic007G178500 Sobic002G093500--Sobic007G178500 Sobic003G106500 Sobic003G106500 Sobic002G093500--Sobic003G106500 Sobic007G023300 Sobic007G023300 Sobic002G093500--Sobic007G023300 Sobic010G109400 Sobic010G109400 Sobic010G134200--Sobic010G109400 Sobic010G134200--Sobic002G093500 Sobic010G134200--Sobic001G269000 Sobic009G113400 Sobic009G113400 Sobic010G134200--Sobic009G113400 Sobic003G421000 Sobic003G421000 Sobic010G134200--Sobic003G421000 Sobic004G183100 Sobic004G183100 Sobic010G134200--Sobic004G183100 Sobic010G134200--Sobic007G023300 Sobic003G065400 Sobic003G065400 Sobic010G134200--Sobic003G065400 Sobic001G438100 Sobic001G438100 Sobic010G134200--Sobic001G438100 Sobic009G070300 Sobic009G070300 Sobic001G467700--Sobic009G070300 Sobic001G467700--Sobic002G093500 Sobic005G115400 Sobic005G115400 Sobic001G467700--Sobic005G115400 Sobic010G115900 Sobic010G115900 Sobic001G467700--Sobic010G115900 Sobic009G214800 Sobic009G214800 Sobic001G467700--Sobic009G214800 Sobic010G143000 Sobic010G143000 Sobic001G467700--Sobic010G143000 Sobic005G089000 Sobic005G089000 Sobic001G467700--Sobic005G089000 Sobic001G467700--Sobic008G073400 Sobic001G198700 Sobic001G198700 Sobic001G467700--Sobic001G198700 Sobic001G269000--Sobic001G268850 Sobic001G269000--Sobic010G134200 Sobic001G269000--Sobic002G093500 Sobic003G055300 Sobic003G055300 Sobic001G269000--Sobic003G055300 Sobic001G206200 Sobic001G206200 Sobic001G269000--Sobic001G206200 Sobic002G338000 Sobic002G338000 Sobic001G269000--Sobic002G338000 Sobic010G000500 Sobic010G000500 Sobic001G269000--Sobic010G000500 Sobic001G269000--Sobic010G109400 Sobic005G087000 Sobic005G087000 Sobic001G269000--Sobic005G087000 Sobic002G195700 Sobic002G195700 Sobic008G073400--Sobic002G195700 Sobic001G019300 Sobic001G019300 Sobic008G073400--Sobic001G019300 Sobic008G073400--Sobic003G106500 Sobic001G321600 Sobic001G321600 Sobic008G073400--Sobic001G321600 Sobic001G005500 Sobic001G005500 Sobic008G073400--Sobic001G005500 Sobic002G281000 Sobic002G281000 Sobic008G073400--Sobic002G281000 Sobic005G021600 Sobic005G021600 Sobic008G073400--Sobic005G021600 Sobic008G073400--Sobic001G198700 Sobic008G073400--Sobic005G089000 Sobic001G407900--Sobic007G023300 Sobic001G339100 Sobic001G339100 Sobic001G407900--Sobic001G339100 Sobic001G498300 Sobic001G498300 Sobic001G407900--Sobic001G498300 Sobic001G407900--Sobic001G206200 Sobic010G218600 Sobic010G218600 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G042301 Sobic001G042301 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic004G193400 Sobic004G193400 Sobic001G407900--Sobic004G193400 Sobic001G268850--Sobic003G055300 Sobic001G268850--Sobic001G269000 Sobic001G268850--Sobic001G206200 Sobic009G165200 Sobic009G165200 Sobic001G268850--Sobic009G165200 Sobic001G268850--Sobic002G338000 Sobic002G289100 Sobic002G289100 Sobic001G268850--Sobic002G289100 Sobic002G352100 Sobic002G352100 Sobic001G268850--Sobic002G352100 Sobic001G268850--Sobic010G000500 Sobic002G414400 Sobic002G414400 Sobic001G268850--Sobic002G414400 Sobic007G178500--Sobic007G023300 Sobic003G187000 Sobic003G187000 Sobic007G178500--Sobic003G187000 Sobic008G063500 Sobic008G063500 Sobic007G178500--Sobic008G063500 Sobic007G178500--Sobic005G021600 Sobic007G178500--Sobic001G498300 Sobic007G178500--Sobic001G339100 Sobic009G028400 Sobic009G028400 Sobic007G178500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic007G178500--Sobic010G265500 Sobic007G178500--Sobic010G218600 Sobic003G106500--Sobic001G198700 Sobic003G106500--Sobic008G073400 Sobic002G001800 Sobic002G001800 Sobic003G106500--Sobic002G001800 Sobic002G371900 Sobic002G371900 Sobic003G106500--Sobic002G371900 Sobic003G106500--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic003G106500--Sobic005G190900 Sobic003G106500--Sobic002G281000 Sobic005G192600 Sobic005G192600 Sobic003G106500--Sobic005G192600 Sobic003G106500--Sobic002G195700 Sobic007G023300--Sobic004G193400 Sobic007G023300--Sobic002G414400 Sobic007G023300--Sobic001G407900 Sobic007G023300--Sobic008G063500 Sobic007G023300--Sobic001G206200 Sobic007G023300--Sobic002G338000 Sobic007G023300--Sobic001G339100 Sobic007G023300--Sobic007G178500 Sobic002G030200 Sobic002G030200 Sobic007G023300--Sobic002G030200
Octagon: transcription factors


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