Gene annotation
Transcriptome id Sobic.002G384400.1
Synonym THI4, Sb02g040060, THI1, TZ
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
FAD dependent oxidoreductase domain containing protein, expressed
UniProt C5X2M4
Pfam PF01946
Panther DB PTHR10617 PTHR10617:SF115
NCBI CDD KOG2960; Protein involved in thiamine biosynthesis and DNA damage tolerance
KEGG Orthology K03146; THI4, cysteine-dependent adenosine diphosphate thiazole synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G54770 : thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4)
RAP-DB (Rice) LOC_Os07g34570.1 : FAD dependent oxidoreductase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a028420 , Zm00025a038371
Brachypodium KQK15929
Barley HORVU7Hr1G090100.5 , HORVU7Hr1G090100.1 , HORVU7Hr1G090100.3
Wheat TraesCS7A02G376800 , TraesCS7D02G373100 , TraesCS7D02G373100 , TraesCS7B02G278200
Populus -


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cDNA sequences
Sobic.002G384400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G068700 cytochrome P450 71D10, putative, expressed -
2 Sobic.001G161300 mttA/Hcf106 family protein, putative, expressed K03116: sec-independent protein translocase protein TatA
3 Sobic.009G138900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
5 Sobic.002G226100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G038300 RNA recognition motif containing protein, putative, expressed -
7 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
9 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G007500 cytochrome P450, putative, expressed K10528: hydroperoxide lyase
11 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
12 Sobic.007G029000 TKL_IRAK_DUF26-lc.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
14 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
15 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
16 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
17 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
19 Sobic.001G276100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
20 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -


Gene co-expression network
sample Sobic002G384400 Sobic002G384400 Sobic004G068700 Sobic004G068700 Sobic002G384400--Sobic004G068700 Sobic001G161300 Sobic001G161300 Sobic002G384400--Sobic001G161300 Sobic009G138900 Sobic009G138900 Sobic002G384400--Sobic009G138900 Sobic002G386400 Sobic002G386400 Sobic002G384400--Sobic002G386400 Sobic002G226100 Sobic002G226100 Sobic002G384400--Sobic002G226100 Sobic002G038300 Sobic002G038300 Sobic002G384400--Sobic002G038300 Sobic004G314800 Sobic004G314800 Sobic002G384400--Sobic004G314800 Sobic006G204100 Sobic006G204100 Sobic002G384400--Sobic006G204100 Sobic002G345200 Sobic002G345200 Sobic002G384400--Sobic002G345200 Sobic001G179100 Sobic001G179100 Sobic004G068700--Sobic001G179100 Sobic003G214000 Sobic003G214000 Sobic004G068700--Sobic003G214000 Sobic002G287000 Sobic002G287000 Sobic004G068700--Sobic002G287000 Sobic004G068700--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic004G068700--Sobic008G111300 Sobic004G068700--Sobic002G384400 Sobic002G366100 Sobic002G366100 Sobic004G068700--Sobic002G366100 Sobic004G068700--Sobic002G226100 Sobic004G068700--Sobic002G386400 Sobic001G161300--Sobic002G038300 Sobic004G007500 Sobic004G007500 Sobic001G161300--Sobic004G007500 Sobic001G161300--Sobic002G386400 Sobic001G161300--Sobic004G068700 Sobic001G276100 Sobic001G276100 Sobic001G161300--Sobic001G276100 Sobic001G161300--Sobic002G226100 Sobic001G161300--Sobic002G384400 Sobic004G343100 Sobic004G343100 Sobic001G161300--Sobic004G343100 Sobic009G000900 Sobic009G000900 Sobic001G161300--Sobic009G000900 Sobic009G138900--Sobic002G038300 Sobic009G138900--Sobic002G384400 Sobic009G138900--Sobic001G161300 Sobic009G138900--Sobic002G386400 Sobic009G138900--Sobic006G204100 Sobic008G072300 Sobic008G072300 Sobic009G138900--Sobic008G072300 Sobic009G234200 Sobic009G234200 Sobic009G138900--Sobic009G234200 Sobic006G197700 Sobic006G197700 Sobic009G138900--Sobic006G197700 Sobic010G082800 Sobic010G082800 Sobic009G138900--Sobic010G082800 Sobic002G386400--Sobic002G038300 Sobic003G208300 Sobic003G208300 Sobic002G386400--Sobic003G208300 Sobic002G386400--Sobic006G197700 Sobic002G386400--Sobic001G161300 Sobic002G163700 Sobic002G163700 Sobic002G386400--Sobic002G163700 Sobic003G330100 Sobic003G330100 Sobic002G386400--Sobic003G330100 Sobic010G028000 Sobic010G028000 Sobic002G386400--Sobic010G028000 Sobic002G386400--Sobic009G234200 Sobic001G388400 Sobic001G388400 Sobic002G386400--Sobic001G388400 Sobic002G226100--Sobic001G161300 Sobic002G226100--Sobic004G068700 Sobic002G226100--Sobic002G386400 Sobic002G226100--Sobic002G384400 Sobic002G226100--Sobic001G276100 Sobic001G416300 Sobic001G416300 Sobic002G226100--Sobic001G416300 Sobic002G226100--Sobic001G179100 Sobic002G226100--Sobic006G197700 Sobic002G226100--Sobic008G111300 Sobic002G038300--Sobic002G386400 Sobic002G038300--Sobic001G161300 Sobic002G038300--Sobic002G163700 Sobic002G038300--Sobic001G388400 Sobic002G038300--Sobic009G234200 Sobic002G038300--Sobic009G138900 Sobic002G038300--Sobic003G208300 Sobic001G450600 Sobic001G450600 Sobic002G038300--Sobic001G450600 Sobic002G038300--Sobic010G028000 Sobic002G305700 Sobic002G305700 Sobic004G314800--Sobic002G305700 Sobic006G248200 Sobic006G248200 Sobic004G314800--Sobic006G248200 Sobic006G280050 Sobic006G280050 Sobic004G314800--Sobic006G280050 Sobic006G111600 Sobic006G111600 Sobic004G314800--Sobic006G111600 Sobic003G328200 Sobic003G328200 Sobic004G314800--Sobic003G328200 Sobic007G171800 Sobic007G171800 Sobic004G314800--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic004G314800--Sobic002G131700 Sobic007G034500 Sobic007G034500 Sobic004G314800--Sobic007G034500 Sobic004G314800--Sobic003G330100 Sobic010G074200 Sobic010G074200 Sobic006G204100--Sobic010G074200 Sobic006G204100--Sobic008G072300 Sobic006G204100--Sobic001G388400 Sobic006G204100--Sobic009G234200 Sobic006G204100--Sobic003G330100 Sobic009G233800 Sobic009G233800 Sobic006G204100--Sobic009G233800 Sobic006G204100--Sobic010G028000 Sobic007G227600 Sobic007G227600 Sobic006G204100--Sobic007G227600 Sobic004G250200 Sobic004G250200 Sobic006G204100--Sobic004G250200 Sobic003G245800 Sobic003G245800 Sobic002G345200--Sobic003G245800 Sobic002G345200--Sobic006G197700 Sobic002G345200--Sobic003G330100 Sobic002G345200--Sobic004G250200 Sobic003G221700 Sobic003G221700 Sobic002G345200--Sobic003G221700 Sobic002G345200--Sobic008G072300 Sobic002G345200--Sobic006G111600 Sobic002G250100 Sobic002G250100 Sobic002G345200--Sobic002G250100 Sobic002G345200--Sobic010G028000
Octagon: transcription factors


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