Gene annotation
Transcriptome id Sobic.001G120000.1
Synonym Sb01g010600
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
UniProt C5WNQ7
Pfam PF00254
Panther DB PTHR10516 PTHR10516:SF308
NCBI CDD KOG0552; FKBP-type peptidyl-prolyl cis-trans isomerase
KEGG Orthology -
Gene Ontology GO:0006457; protein folding


Orthologs (automatic annotation)
TAIR AT1G18170 : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os03g50080.1 : peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed
MaizeGDB (Corn) Zm00025a007806 , Zm00025a017017
Brachypodium KQK13588
Barley -
Wheat TraesCS4B02G043700 , TraesCS4D02G041200 , TraesCS4A02G270400
Populus -


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cDNA sequences
Sobic.001G120000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
2 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
3 Sobic.002G190800 expressed protein -
4 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
5 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G017200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
8 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
9 Sobic.001G255400 - -
10 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
11 Sobic.004G253800 - -
12 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
13 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
14 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
15 Sobic.006G025700 - -
16 Sobic.001G191000 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
17 Sobic.003G392000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PDE312/PTAC10, putative, expressed -
18 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G117600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutaredoxin family protein (Os)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
20 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G120000 Sobic001G120000 Sobic004G044000 Sobic004G044000 Sobic001G120000--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic001G120000--Sobic004G191200 Sobic002G190800 Sobic002G190800 Sobic001G120000--Sobic002G190800 Sobic006G263800 Sobic006G263800 Sobic001G120000--Sobic006G263800 Sobic002G190100 Sobic002G190100 Sobic001G120000--Sobic002G190100 Sobic004G017200 Sobic004G017200 Sobic001G120000--Sobic004G017200 Sobic002G305700 Sobic002G305700 Sobic001G120000--Sobic002G305700 Sobic001G027600 Sobic001G027600 Sobic001G120000--Sobic001G027600 Sobic001G255400 Sobic001G255400 Sobic001G120000--Sobic001G255400 Sobic004G044000--Sobic001G027600 Sobic001G383900 Sobic001G383900 Sobic004G044000--Sobic001G383900 Sobic006G280050 Sobic006G280050 Sobic004G044000--Sobic006G280050 Sobic009G001500 Sobic009G001500 Sobic004G044000--Sobic009G001500 Sobic003G030900 Sobic003G030900 Sobic004G044000--Sobic003G030900 Sobic007G013400 Sobic007G013400 Sobic004G044000--Sobic007G013400 Sobic002G242600 Sobic002G242600 Sobic004G044000--Sobic002G242600 Sobic001G076500 Sobic001G076500 Sobic004G044000--Sobic001G076500 Sobic007G034500 Sobic007G034500 Sobic004G044000--Sobic007G034500 Sobic004G191200--Sobic001G027600 Sobic004G191200--Sobic006G280050 Sobic003G202300 Sobic003G202300 Sobic004G191200--Sobic003G202300 Sobic001G191000 Sobic001G191000 Sobic004G191200--Sobic001G191000 Sobic004G317900 Sobic004G317900 Sobic004G191200--Sobic004G317900 Sobic001G453300 Sobic001G453300 Sobic004G191200--Sobic001G453300 Sobic004G191200--Sobic007G034500 Sobic003G246400 Sobic003G246400 Sobic004G191200--Sobic003G246400 Sobic004G191200--Sobic002G305700 Sobic002G190800--Sobic004G044000 Sobic010G012900 Sobic010G012900 Sobic002G190800--Sobic010G012900 Sobic001G172300 Sobic001G172300 Sobic002G190800--Sobic001G172300 Sobic002G190800--Sobic007G034500 Sobic002G190800--Sobic001G383900 Sobic003G392000 Sobic003G392000 Sobic002G190800--Sobic003G392000 Sobic002G190800--Sobic001G120000 Sobic001G357200 Sobic001G357200 Sobic002G190800--Sobic001G357200 Sobic001G188600 Sobic001G188600 Sobic002G190800--Sobic001G188600 Sobic007G116100 Sobic007G116100 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic002G140000 Sobic002G140000 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic006G263800--Sobic001G120000 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G190100--Sobic002G242600 Sobic002G190100--Sobic001G027600 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000 Sobic002G343700 Sobic002G343700 Sobic004G017200--Sobic002G343700 Sobic004G017200--Sobic004G044000 Sobic004G017200--Sobic001G120000 Sobic004G017200--Sobic001G027600 Sobic004G017200--Sobic003G030900 Sobic004G017200--Sobic001G076500 Sobic001G427000 Sobic001G427000 Sobic004G017200--Sobic001G427000 Sobic004G017200--Sobic006G280050 Sobic003G095000 Sobic003G095000 Sobic004G017200--Sobic003G095000 Sobic002G305700--Sobic001G191000 Sobic001G333000 Sobic001G333000 Sobic002G305700--Sobic001G333000 Sobic003G256200 Sobic003G256200 Sobic002G305700--Sobic003G256200 Sobic006G107600 Sobic006G107600 Sobic002G305700--Sobic006G107600 Sobic002G305700--Sobic004G191200 Sobic002G305700--Sobic006G280050 Sobic006G248200 Sobic006G248200 Sobic002G305700--Sobic006G248200 Sobic009G212000 Sobic009G212000 Sobic002G305700--Sobic009G212000 Sobic001G240000 Sobic001G240000 Sobic002G305700--Sobic001G240000 Sobic001G027600--Sobic001G453300 Sobic001G027600--Sobic001G427000 Sobic001G027600--Sobic001G076500 Sobic001G027600--Sobic004G044000 Sobic001G027600--Sobic004G317900 Sobic001G027600--Sobic001G383900 Sobic003G295800 Sobic003G295800 Sobic001G027600--Sobic003G295800 Sobic001G027600--Sobic004G191200 Sobic001G027600--Sobic006G280050 Sobic001G255400--Sobic001G120000 Sobic004G055600 Sobic004G055600 Sobic001G255400--Sobic004G055600 Sobic002G004000 Sobic002G004000 Sobic001G255400--Sobic002G004000 Sobic009G233800 Sobic009G233800 Sobic001G255400--Sobic009G233800 Sobic006G204100 Sobic006G204100 Sobic001G255400--Sobic006G204100 Sobic006G265400 Sobic006G265400 Sobic001G255400--Sobic006G265400 Sobic001G076200 Sobic001G076200 Sobic001G255400--Sobic001G076200 Sobic003G283100 Sobic003G283100 Sobic001G255400--Sobic003G283100 Sobic001G426400 Sobic001G426400 Sobic001G255400--Sobic001G426400
Octagon: transcription factors


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