Gene annotation
Transcriptome id Sobic.008G117600.3,Sobic.008G117600.2,Sobic.008G117600.4
Synonym Sb08g017120,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Glutaredoxin family protein (Os) (PubMedID : 27208977)
OsGrx_C12 - glutaredoxin subgroup III, expressed
UniProt C5YPD2
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF98
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K03676; grxC, GLRX, glutaredoxin 3
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G47870 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os12g35330.1 : OsGrx_C12 - glutaredoxin subgroup III, expressed
MaizeGDB (Corn) Zm00025a054355
Brachypodium KQJ86457 , KQJ86460
Barley -
Wheat TraesCS4D02G147300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G242600 expressed protein -
4 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
5 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
6 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
7 Sobic.009G136900 peptide transporter PTR2, putative, expressed -
8 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
9 Sobic.006G025700 - -
10 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
11 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
12 Sobic.001G017000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal protein S6, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
13 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
14 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
15 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
16 Sobic.001G191000 ribosomal protein, putative, expressed K02988: RP-S5, MRPS5, small subunit ribosomal protein S5
17 Sobic.006G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.009G059100 Cupin domain containing protein, expressed -
19 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
20 Sobic.003G383500 rhodanese-like, putative, expressed -


Gene co-expression network
sample Sobic008G117600 Sobic008G117600 Sobic003G030900 Sobic003G030900 Sobic008G117600--Sobic003G030900 Sobic002G190100 Sobic002G190100 Sobic008G117600--Sobic002G190100 Sobic002G242600 Sobic002G242600 Sobic008G117600--Sobic002G242600 Sobic001G120000 Sobic001G120000 Sobic008G117600--Sobic001G120000 Sobic001G027600 Sobic001G027600 Sobic008G117600--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic008G117600--Sobic004G044000 Sobic009G136900 Sobic009G136900 Sobic008G117600--Sobic009G136900 Sobic002G305700 Sobic002G305700 Sobic008G117600--Sobic002G305700 Sobic006G025700 Sobic006G025700 Sobic008G117600--Sobic006G025700 Sobic003G030900--Sobic001G027600 Sobic003G030900--Sobic004G044000 Sobic006G248200 Sobic006G248200 Sobic003G030900--Sobic006G248200 Sobic001G040000 Sobic001G040000 Sobic003G030900--Sobic001G040000 Sobic001G240000 Sobic001G240000 Sobic003G030900--Sobic001G240000 Sobic007G013400 Sobic007G013400 Sobic003G030900--Sobic007G013400 Sobic003G030900--Sobic002G242600 Sobic004G317900 Sobic004G317900 Sobic003G030900--Sobic004G317900 Sobic001G531200 Sobic001G531200 Sobic003G030900--Sobic001G531200 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G190100--Sobic002G242600 Sobic002G190100--Sobic001G027600 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic002G190100--Sobic001G120000 Sobic002G242600--Sobic004G044000 Sobic002G242600--Sobic007G013400 Sobic002G242600--Sobic003G030900 Sobic003G383500 Sobic003G383500 Sobic002G242600--Sobic003G383500 Sobic009G001500 Sobic009G001500 Sobic002G242600--Sobic009G001500 Sobic002G242600--Sobic002G190100 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic002G242600--Sobic006G248200 Sobic001G120000--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic001G120000--Sobic004G191200 Sobic002G190800 Sobic002G190800 Sobic001G120000--Sobic002G190800 Sobic001G120000--Sobic006G263800 Sobic001G120000--Sobic002G190100 Sobic004G017200 Sobic004G017200 Sobic001G120000--Sobic004G017200 Sobic001G120000--Sobic002G305700 Sobic001G120000--Sobic001G027600 Sobic001G255400 Sobic001G255400 Sobic001G120000--Sobic001G255400 Sobic001G453300 Sobic001G453300 Sobic001G027600--Sobic001G453300 Sobic001G427000 Sobic001G427000 Sobic001G027600--Sobic001G427000 Sobic001G076500 Sobic001G076500 Sobic001G027600--Sobic001G076500 Sobic001G027600--Sobic004G044000 Sobic001G027600--Sobic004G317900 Sobic001G383900 Sobic001G383900 Sobic001G027600--Sobic001G383900 Sobic003G295800 Sobic003G295800 Sobic001G027600--Sobic003G295800 Sobic001G027600--Sobic004G191200 Sobic006G280050 Sobic006G280050 Sobic001G027600--Sobic006G280050 Sobic004G044000--Sobic001G027600 Sobic004G044000--Sobic001G383900 Sobic004G044000--Sobic006G280050 Sobic004G044000--Sobic009G001500 Sobic004G044000--Sobic003G030900 Sobic004G044000--Sobic007G013400 Sobic004G044000--Sobic002G242600 Sobic004G044000--Sobic001G076500 Sobic007G034500 Sobic007G034500 Sobic004G044000--Sobic007G034500 Sobic009G136900--Sobic006G263800 Sobic001G076200 Sobic001G076200 Sobic009G136900--Sobic001G076200 Sobic007G210600 Sobic007G210600 Sobic009G136900--Sobic007G210600 Sobic003G114100 Sobic003G114100 Sobic009G136900--Sobic003G114100 Sobic004G055600 Sobic004G055600 Sobic009G136900--Sobic004G055600 Sobic004G015700 Sobic004G015700 Sobic009G136900--Sobic004G015700 Sobic002G004000 Sobic002G004000 Sobic009G136900--Sobic002G004000 Sobic009G136900--Sobic008G117600 Sobic009G136900--Sobic001G120000 Sobic001G191000 Sobic001G191000 Sobic002G305700--Sobic001G191000 Sobic001G333000 Sobic001G333000 Sobic002G305700--Sobic001G333000 Sobic003G256200 Sobic003G256200 Sobic002G305700--Sobic003G256200 Sobic006G107600 Sobic006G107600 Sobic002G305700--Sobic006G107600 Sobic002G305700--Sobic004G191200 Sobic002G305700--Sobic006G280050 Sobic002G305700--Sobic006G248200 Sobic009G212000 Sobic009G212000 Sobic002G305700--Sobic009G212000 Sobic002G305700--Sobic001G240000 Sobic003G157500 Sobic003G157500 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic002G020100 Sobic002G020100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic001G003600 Sobic001G003600 Sobic006G025700--Sobic001G003600 Sobic006G025700--Sobic002G190100 Sobic001G435600 Sobic001G435600 Sobic006G025700--Sobic001G435600 Sobic004G109000 Sobic004G109000 Sobic006G025700--Sobic004G109000 Sobic003G096100 Sobic003G096100 Sobic006G025700--Sobic003G096100
Octagon: transcription factors


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