Gene annotation
Transcriptome id Sobic.009G136900.1
Synonym Sb09g020300
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5YXU4
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF92
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G68570 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g34010.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a043687
Brachypodium PNT71265 , KQK06270
Barley HORVU7Hr1G042120.1 , HORVU7Hr1G042120.2 , HORVU7Hr1G042120.3 , HORVU7Hr1G042120.4 , HORVU7Hr1G042120.6 , HORVU7Hr1G042120.7 , HORVU7Hr1G042120.8 , HORVU7Hr1G042120.9 , HORVU1Hr1G063470.11 , HORVU1Hr1G063470.10 , HORVU1Hr1G063470.13 , HORVU1Hr1G063470.12 , HORVU1Hr1G063470.1 , HORVU1Hr1G063470.3 , HORVU1Hr1G063470.2 , HORVU1Hr1G063470.5 , HORVU1Hr1G063470.4 , HORVU1Hr1G063470.6 , HORVU1Hr1G063470.9 , HORVU1Hr1G063470.8
Wheat TraesCS1A02G257900 , TraesCS1B02G267900 , TraesCS1D02G256700 , TraesCS1D02G257200 , TraesCS1B02G268300 , TraesCS1A02G257400
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G136900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
2 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
3 Sobic.007G210600 ABC transporter, ATP-binding protein, putative, expressed -
4 Sobic.003G114100 expressed protein -
5 Sobic.004G055600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
6 Sobic.004G015700 serine/threonine-protein kinase receptor precursor, putative, expressed -
7 Sobic.002G004000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
8 Sobic.008G117600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Glutaredoxin family protein (Os)(PubMedID : 27208977)@OsGrx_C12 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
9 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
10 Sobic.003G305300 - -
11 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
12 Sobic.008G131700 PsbP, putative, expressed -
13 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
15 Sobic.005G084000 expressed protein -
16 Sobic.008G177850 - -
17 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.003G014000 peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase, putative, expressed -
19 Sobic.007G201400 pentatricopeptide, putative, expressed -
20 Sobic.002G242600 expressed protein -


Gene co-expression network
sample Sobic009G136900 Sobic009G136900 Sobic006G263800 Sobic006G263800 Sobic009G136900--Sobic006G263800 Sobic001G076200 Sobic001G076200 Sobic009G136900--Sobic001G076200 Sobic007G210600 Sobic007G210600 Sobic009G136900--Sobic007G210600 Sobic003G114100 Sobic003G114100 Sobic009G136900--Sobic003G114100 Sobic004G055600 Sobic004G055600 Sobic009G136900--Sobic004G055600 Sobic004G015700 Sobic004G015700 Sobic009G136900--Sobic004G015700 Sobic002G004000 Sobic002G004000 Sobic009G136900--Sobic002G004000 Sobic008G117600 Sobic008G117600 Sobic009G136900--Sobic008G117600 Sobic001G120000 Sobic001G120000 Sobic009G136900--Sobic001G120000 Sobic007G116100 Sobic007G116100 Sobic006G263800--Sobic007G116100 Sobic002G190100 Sobic002G190100 Sobic006G263800--Sobic002G190100 Sobic002G140000 Sobic002G140000 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic006G263800--Sobic001G120000 Sobic004G246800 Sobic004G246800 Sobic001G076200--Sobic004G246800 Sobic003G030400 Sobic003G030400 Sobic001G076200--Sobic003G030400 Sobic001G537700 Sobic001G537700 Sobic001G076200--Sobic001G537700 Sobic001G076200--Sobic003G114100 Sobic009G233800 Sobic009G233800 Sobic001G076200--Sobic009G233800 Sobic004G249500 Sobic004G249500 Sobic001G076200--Sobic004G249500 Sobic008G021700 Sobic008G021700 Sobic001G076200--Sobic008G021700 Sobic002G114700 Sobic002G114700 Sobic001G076200--Sobic002G114700 Sobic001G076200--Sobic004G055600 Sobic001G495300 Sobic001G495300 Sobic007G210600--Sobic001G495300 Sobic003G074700 Sobic003G074700 Sobic007G210600--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic007G210600--Sobic005G084000 Sobic008G131700 Sobic008G131700 Sobic007G210600--Sobic008G131700 Sobic004G143400 Sobic004G143400 Sobic007G210600--Sobic004G143400 Sobic007G201400 Sobic007G201400 Sobic007G210600--Sobic007G201400 Sobic007G210600--Sobic009G136900 Sobic006G248200 Sobic006G248200 Sobic007G210600--Sobic006G248200 Sobic007G210600--Sobic004G015700 Sobic003G114100--Sobic002G114700 Sobic003G114100--Sobic001G076200 Sobic008G078900 Sobic008G078900 Sobic003G114100--Sobic008G078900 Sobic010G052500 Sobic010G052500 Sobic003G114100--Sobic010G052500 Sobic003G014000 Sobic003G014000 Sobic003G114100--Sobic003G014000 Sobic003G114100--Sobic007G201400 Sobic003G114100--Sobic008G131700 Sobic006G273400 Sobic006G273400 Sobic003G114100--Sobic006G273400 Sobic001G514100 Sobic001G514100 Sobic003G114100--Sobic001G514100 Sobic004G055600--Sobic009G233800 Sobic004G055600--Sobic002G004000 Sobic004G055600--Sobic001G076200 Sobic001G255400 Sobic001G255400 Sobic004G055600--Sobic001G255400 Sobic004G055600--Sobic009G136900 Sobic001G388400 Sobic001G388400 Sobic004G055600--Sobic001G388400 Sobic009G253000 Sobic009G253000 Sobic004G055600--Sobic009G253000 Sobic008G177850 Sobic008G177850 Sobic004G055600--Sobic008G177850 Sobic008G101500 Sobic008G101500 Sobic004G055600--Sobic008G101500 Sobic004G015700--Sobic006G263800 Sobic003G383500 Sobic003G383500 Sobic004G015700--Sobic003G383500 Sobic009G083300 Sobic009G083300 Sobic004G015700--Sobic009G083300 Sobic007G013400 Sobic007G013400 Sobic004G015700--Sobic007G013400 Sobic004G015700--Sobic001G099000 Sobic001G236800 Sobic001G236800 Sobic004G015700--Sobic001G236800 Sobic004G015700--Sobic002G190100 Sobic009G212000 Sobic009G212000 Sobic004G015700--Sobic009G212000 Sobic003G261200 Sobic003G261200 Sobic004G015700--Sobic003G261200 Sobic002G004000--Sobic004G055600 Sobic006G204100 Sobic006G204100 Sobic002G004000--Sobic006G204100 Sobic002G004000--Sobic001G120000 Sobic004G017200 Sobic004G017200 Sobic002G004000--Sobic004G017200 Sobic003G030900 Sobic003G030900 Sobic002G004000--Sobic003G030900 Sobic001G240000 Sobic001G240000 Sobic002G004000--Sobic001G240000 Sobic002G305700 Sobic002G305700 Sobic002G004000--Sobic002G305700 Sobic003G221700 Sobic003G221700 Sobic002G004000--Sobic003G221700 Sobic001G333000 Sobic001G333000 Sobic002G004000--Sobic001G333000 Sobic008G117600--Sobic003G030900 Sobic008G117600--Sobic002G190100 Sobic002G242600 Sobic002G242600 Sobic008G117600--Sobic002G242600 Sobic008G117600--Sobic001G120000 Sobic001G027600 Sobic001G027600 Sobic008G117600--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic008G117600--Sobic004G044000 Sobic008G117600--Sobic009G136900 Sobic008G117600--Sobic002G305700 Sobic006G025700 Sobic006G025700 Sobic008G117600--Sobic006G025700 Sobic001G120000--Sobic004G044000 Sobic004G191200 Sobic004G191200 Sobic001G120000--Sobic004G191200 Sobic002G190800 Sobic002G190800 Sobic001G120000--Sobic002G190800 Sobic001G120000--Sobic006G263800 Sobic001G120000--Sobic002G190100 Sobic001G120000--Sobic004G017200 Sobic001G120000--Sobic002G305700 Sobic001G120000--Sobic001G027600 Sobic001G120000--Sobic001G255400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.