Gene annotation
Transcriptome id Sobic.008G177850.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8A0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G41480 : Folylpolyglutamate synthetase family protein
RAP-DB (Rice) LOC_Os12g42870.2 : Mur ligase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a054312 , Zm00025a025489
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.001G076200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf44, putative, expressed K07399: resB, cytochrome c biogenesis protein
3 Sobic.004G055600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
4 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
5 Sobic.004G249500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
6 Sobic.003G026700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
7 Sobic.010G258300 integral membrane protein, putative, expressed -
8 Sobic.001G093600 - -
9 Sobic.009G136900 peptide transporter PTR2, putative, expressed -
10 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
11 Sobic.003G114100 expressed protein -
12 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
13 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
14 Sobic.007G191900 ACT domain containing protein, expressed -
15 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
16 Sobic.001G388400 expressed protein -
17 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
18 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
19 Sobic.007G179750 - -
20 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -


Gene co-expression network
sample Sobic008G177850 Sobic008G177850 Sobic003G222300 Sobic003G222300 Sobic008G177850--Sobic003G222300 Sobic001G076200 Sobic001G076200 Sobic008G177850--Sobic001G076200 Sobic004G055600 Sobic004G055600 Sobic008G177850--Sobic004G055600 Sobic008G101500 Sobic008G101500 Sobic008G177850--Sobic008G101500 Sobic004G249500 Sobic004G249500 Sobic008G177850--Sobic004G249500 Sobic003G026700 Sobic003G026700 Sobic008G177850--Sobic003G026700 Sobic010G258300 Sobic010G258300 Sobic008G177850--Sobic010G258300 Sobic001G093600 Sobic001G093600 Sobic008G177850--Sobic001G093600 Sobic009G136900 Sobic009G136900 Sobic008G177850--Sobic009G136900 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic009G213400 Sobic009G213400 Sobic003G222300--Sobic009G213400 Sobic003G222300--Sobic001G093600 Sobic003G222300--Sobic008G177850 Sobic009G154600 Sobic009G154600 Sobic003G222300--Sobic009G154600 Sobic001G031300 Sobic001G031300 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic004G246800 Sobic004G246800 Sobic001G076200--Sobic004G246800 Sobic003G030400 Sobic003G030400 Sobic001G076200--Sobic003G030400 Sobic001G537700 Sobic001G537700 Sobic001G076200--Sobic001G537700 Sobic003G114100 Sobic003G114100 Sobic001G076200--Sobic003G114100 Sobic009G233800 Sobic009G233800 Sobic001G076200--Sobic009G233800 Sobic001G076200--Sobic004G249500 Sobic008G021700 Sobic008G021700 Sobic001G076200--Sobic008G021700 Sobic002G114700 Sobic002G114700 Sobic001G076200--Sobic002G114700 Sobic001G076200--Sobic004G055600 Sobic004G055600--Sobic009G233800 Sobic002G004000 Sobic002G004000 Sobic004G055600--Sobic002G004000 Sobic004G055600--Sobic001G076200 Sobic001G255400 Sobic001G255400 Sobic004G055600--Sobic001G255400 Sobic004G055600--Sobic009G136900 Sobic001G388400 Sobic001G388400 Sobic004G055600--Sobic001G388400 Sobic009G253000 Sobic009G253000 Sobic004G055600--Sobic009G253000 Sobic004G055600--Sobic008G177850 Sobic004G055600--Sobic008G101500 Sobic008G101500--Sobic001G076200 Sobic008G101500--Sobic004G249500 Sobic005G127000 Sobic005G127000 Sobic008G101500--Sobic005G127000 Sobic008G101500--Sobic003G114100 Sobic007G179750 Sobic007G179750 Sobic008G101500--Sobic007G179750 Sobic003G178700 Sobic003G178700 Sobic008G101500--Sobic003G178700 Sobic008G101500--Sobic001G093600 Sobic001G217700 Sobic001G217700 Sobic008G101500--Sobic001G217700 Sobic008G118000 Sobic008G118000 Sobic008G101500--Sobic008G118000 Sobic004G249500--Sobic001G076200 Sobic004G249500--Sobic003G030400 Sobic004G249500--Sobic008G101500 Sobic009G238100 Sobic009G238100 Sobic004G249500--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic004G249500--Sobic001G426400 Sobic004G249500--Sobic008G177850 Sobic004G249500--Sobic004G246800 Sobic004G249500--Sobic003G114100 Sobic005G009300 Sobic005G009300 Sobic004G249500--Sobic005G009300 Sobic003G026700--Sobic003G107300 Sobic003G026700--Sobic001G093600 Sobic001G423100 Sobic001G423100 Sobic003G026700--Sobic001G423100 Sobic003G026700--Sobic008G177850 Sobic003G026700--Sobic009G154600 Sobic007G191900 Sobic007G191900 Sobic003G026700--Sobic007G191900 Sobic003G026700--Sobic009G253000 Sobic003G255100 Sobic003G255100 Sobic003G026700--Sobic003G255100 Sobic003G406700 Sobic003G406700 Sobic003G026700--Sobic003G406700 Sobic010G258300--Sobic003G222300 Sobic007G110200 Sobic007G110200 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic010G258300--Sobic003G222600 Sobic007G205600 Sobic007G205600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic003G170200 Sobic003G170200 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic010G258300--Sobic003G030400 Sobic001G093600--Sobic003G107300 Sobic006G273000 Sobic006G273000 Sobic001G093600--Sobic006G273000 Sobic001G005500 Sobic001G005500 Sobic001G093600--Sobic001G005500 Sobic001G275200 Sobic001G275200 Sobic001G093600--Sobic001G275200 Sobic001G093600--Sobic003G255100 Sobic001G093600--Sobic007G179750 Sobic003G284300 Sobic003G284300 Sobic001G093600--Sobic003G284300 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic006G263800 Sobic006G263800 Sobic009G136900--Sobic006G263800 Sobic009G136900--Sobic001G076200 Sobic007G210600 Sobic007G210600 Sobic009G136900--Sobic007G210600 Sobic009G136900--Sobic003G114100 Sobic009G136900--Sobic004G055600 Sobic004G015700 Sobic004G015700 Sobic009G136900--Sobic004G015700 Sobic009G136900--Sobic002G004000 Sobic008G117600 Sobic008G117600 Sobic009G136900--Sobic008G117600 Sobic001G120000 Sobic001G120000 Sobic009G136900--Sobic001G120000
Octagon: transcription factors


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