Gene annotation
Transcriptome id Sobic.003G222300.1
Synonym Sb03g028060
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1W0VYH4
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF253
NCBI CDD KOG1575; Voltage-gated shaker-like K+ channel, subunit beta/KCNAB
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G60690 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g43090.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041363 , Zm00025a014620 , Zm00025a038451 , Zm00025a038544 , Zm00025a028397
Brachypodium KQK08750
Barley HORVU3Hr1G054640.4 , HORVU3Hr1G054640.5 , HORVU3Hr1G054640.2 , HORVU3Hr1G054640.3 , HORVU3Hr1G054640.1 , HORVU2Hr1G082740.1 , HORVU2Hr1G082740.3 , HORVU2Hr1G082740.2 , HORVU2Hr1G082740.5 , HORVU2Hr1G082740.4 , HORVU2Hr1G082740.7 , HORVU2Hr1G082740.6
Wheat TraesCS7D02G186400 , TraesCS7D02G186400 , TraesCS2D02G336900 , TraesCS7A02G184900 , TraesCS2B02G356100 , TraesCS3A02G222900 , TraesCS2D02G336700 , TraesCS7B02G090000 , TraesCS3B02G252400 , TraesCS7B02G089600 , TraesCS2A02G326100 , TraesCS3D02G230600 , TraesCS2D02G336800 , TraesCS7A02G185000 , TraesCS7B02G089800 , TraesCS2B02G355900 , TraesCS2A02G325800 , TraesCS2A02G325800
Populus -


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cDNA sequences
Sobic.003G222300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G258300 integral membrane protein, putative, expressed -
2 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
3 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
4 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
5 Sobic.001G093600 - -
6 Sobic.008G177850 - -
7 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
8 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
10 Sobic.007G110200 wound responsive protein, putative, expressed -
11 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
12 Sobic.006G273000 AT hook motif domain containing protein, expressed -
13 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
14 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
15 Sobic.004G147200 - -
16 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.004G011566 - K03781: katE, CAT, catB, catalase
18 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein


Gene co-expression network
sample Sobic003G222300 Sobic003G222300 Sobic010G258300 Sobic010G258300 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic009G213400 Sobic009G213400 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic009G154600 Sobic009G154600 Sobic003G222300--Sobic009G154600 Sobic001G031300 Sobic001G031300 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic010G258300--Sobic003G222300 Sobic007G110200 Sobic007G110200 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic003G222600 Sobic003G222600 Sobic010G258300--Sobic003G222600 Sobic007G205600 Sobic007G205600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic003G170200 Sobic003G170200 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic003G030400 Sobic003G030400 Sobic010G258300--Sobic003G030400 Sobic010G245100--Sobic009G213400 Sobic006G273000 Sobic006G273000 Sobic010G245100--Sobic006G273000 Sobic010G245100--Sobic003G222300 Sobic003G284300 Sobic003G284300 Sobic010G245100--Sobic003G284300 Sobic001G275200 Sobic001G275200 Sobic010G245100--Sobic001G275200 Sobic001G005500 Sobic001G005500 Sobic010G245100--Sobic001G005500 Sobic010G245100--Sobic010G052500 Sobic005G055900 Sobic005G055900 Sobic010G245100--Sobic005G055900 Sobic010G245100--Sobic001G093600 Sobic010G052500--Sobic003G222300 Sobic003G114100 Sobic003G114100 Sobic010G052500--Sobic003G114100 Sobic010G052500--Sobic006G273000 Sobic010G052500--Sobic009G213400 Sobic010G052500--Sobic001G005500 Sobic010G246600 Sobic010G246600 Sobic010G052500--Sobic010G246600 Sobic010G052500--Sobic001G275200 Sobic007G191900 Sobic007G191900 Sobic010G052500--Sobic007G191900 Sobic010G052500--Sobic010G245100 Sobic009G213400--Sobic010G245100 Sobic001G377000 Sobic001G377000 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic009G213400--Sobic010G052500 Sobic001G093600--Sobic003G107300 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G093600--Sobic001G275200 Sobic003G255100 Sobic003G255100 Sobic001G093600--Sobic003G255100 Sobic007G179750 Sobic007G179750 Sobic001G093600--Sobic007G179750 Sobic001G093600--Sobic003G284300 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic008G177850--Sobic003G222300 Sobic001G076200 Sobic001G076200 Sobic008G177850--Sobic001G076200 Sobic004G055600 Sobic004G055600 Sobic008G177850--Sobic004G055600 Sobic008G101500 Sobic008G101500 Sobic008G177850--Sobic008G101500 Sobic004G249500 Sobic004G249500 Sobic008G177850--Sobic004G249500 Sobic003G026700 Sobic003G026700 Sobic008G177850--Sobic003G026700 Sobic008G177850--Sobic010G258300 Sobic008G177850--Sobic001G093600 Sobic009G136900 Sobic009G136900 Sobic008G177850--Sobic009G136900 Sobic009G154600--Sobic001G191200 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic009G154600--Sobic010G258300 Sobic003G406700 Sobic003G406700 Sobic009G154600--Sobic003G406700 Sobic009G154600--Sobic003G222300 Sobic009G154600--Sobic001G031300 Sobic009G154600--Sobic009G213400 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G031300--Sobic001G377000 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200 Sobic003G107300--Sobic001G093600 Sobic003G107300--Sobic009G154600 Sobic003G107300--Sobic001G191200 Sobic003G107300--Sobic003G406700 Sobic003G107300--Sobic003G026700 Sobic003G107300--Sobic003G255100 Sobic003G107300--Sobic001G005500 Sobic003G107300--Sobic009G213400 Sobic003G107300--Sobic003G222300
Octagon: transcription factors


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