Gene annotation
Transcriptome id Sobic.007G205600.1
Synonym APX6, Sb07g027300
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
peroxidase precursor, putative, expressed
UniProt C5YIM7
Pfam PF00141
Panther DB PTHR31356 PTHR31356:SF4
NCBI CDD -
KEGG Orthology K00434; L-ascorbate peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G32320 : ascorbate peroxidase 6
RAP-DB (Rice) LOC_Os08g41090.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a005135
Brachypodium KQJ98975 , KQJ98974
Barley HORVU7Hr1G051570.9 , HORVU7Hr1G051570.8 , HORVU7Hr1G051570.7 , HORVU7Hr1G051570.6 , HORVU7Hr1G051570.5 , HORVU7Hr1G051570.4 , HORVU7Hr1G051570.3 , HORVU7Hr1G051570.2 , HORVU7Hr1G051570.1 , HORVU7Hr1G051570.17 , HORVU7Hr1G051570.16 , HORVU7Hr1G051570.15 , HORVU7Hr1G051570.14 , HORVU7Hr1G051570.13 , HORVU7Hr1G051570.12 , HORVU7Hr1G051570.11 , HORVU7Hr1G051570.10 , HORVU7Hr1G051570.19 , HORVU7Hr1G051570.18
Wheat TraesCS7D02G249200 , TraesCS7D02G249200 , TraesCS7A02G250500 , TraesCS7A02G250500 , TraesCS7B02G140600 , TraesCS7B02G140600
Populus -


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cDNA sequences
Sobic.007G205600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G388400 expressed protein -
2 Sobic.003G170200 OsClp2 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
3 Sobic.001G537700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
4 Sobic.010G258300 integral membrane protein, putative, expressed -
5 Sobic.006G220600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
6 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
8 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
9 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G068600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.002G114700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
13 Sobic.002G163700 expressed protein -
14 Sobic.007G069400 pentatricopeptide, putative, expressed -
15 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
16 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
17 Sobic.007G110200 wound responsive protein, putative, expressed -
18 Sobic.009G233800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein ycf23, putative, expressed -
19 Sobic.004G248400 APO, putative, expressed -
20 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -


Gene co-expression network
sample Sobic007G205600 Sobic007G205600 Sobic001G388400 Sobic001G388400 Sobic007G205600--Sobic001G388400 Sobic003G170200 Sobic003G170200 Sobic007G205600--Sobic003G170200 Sobic001G537700 Sobic001G537700 Sobic007G205600--Sobic001G537700 Sobic010G258300 Sobic010G258300 Sobic007G205600--Sobic010G258300 Sobic006G220600 Sobic006G220600 Sobic007G205600--Sobic006G220600 Sobic003G222600 Sobic003G222600 Sobic007G205600--Sobic003G222600 Sobic010G211500 Sobic010G211500 Sobic007G205600--Sobic010G211500 Sobic001G450600 Sobic001G450600 Sobic007G205600--Sobic001G450600 Sobic001G031300 Sobic001G031300 Sobic007G205600--Sobic001G031300 Sobic009G234200 Sobic009G234200 Sobic001G388400--Sobic009G234200 Sobic010G028000 Sobic010G028000 Sobic001G388400--Sobic010G028000 Sobic009G036300 Sobic009G036300 Sobic001G388400--Sobic009G036300 Sobic010G074200 Sobic010G074200 Sobic001G388400--Sobic010G074200 Sobic007G227600 Sobic007G227600 Sobic001G388400--Sobic007G227600 Sobic006G204100 Sobic006G204100 Sobic001G388400--Sobic006G204100 Sobic009G253000 Sobic009G253000 Sobic001G388400--Sobic009G253000 Sobic009G233800 Sobic009G233800 Sobic001G388400--Sobic009G233800 Sobic002G250100 Sobic002G250100 Sobic001G388400--Sobic002G250100 Sobic001G102500 Sobic001G102500 Sobic003G170200--Sobic001G102500 Sobic003G170200--Sobic007G205600 Sobic008G078900 Sobic008G078900 Sobic003G170200--Sobic008G078900 Sobic003G162800 Sobic003G162800 Sobic003G170200--Sobic003G162800 Sobic003G286300 Sobic003G286300 Sobic003G170200--Sobic003G286300 Sobic001G514100 Sobic001G514100 Sobic003G170200--Sobic001G514100 Sobic001G375000 Sobic001G375000 Sobic003G170200--Sobic001G375000 Sobic003G170200--Sobic001G450600 Sobic003G128400 Sobic003G128400 Sobic003G170200--Sobic003G128400 Sobic003G039300 Sobic003G039300 Sobic001G537700--Sobic003G039300 Sobic001G076200 Sobic001G076200 Sobic001G537700--Sobic001G076200 Sobic006G110200 Sobic006G110200 Sobic001G537700--Sobic006G110200 Sobic001G537700--Sobic007G205600 Sobic007G069400 Sobic007G069400 Sobic001G537700--Sobic007G069400 Sobic001G537700--Sobic001G388400 Sobic001G537700--Sobic009G233800 Sobic001G537700--Sobic010G028000 Sobic002G114700 Sobic002G114700 Sobic001G537700--Sobic002G114700 Sobic003G222300 Sobic003G222300 Sobic010G258300--Sobic003G222300 Sobic007G110200 Sobic007G110200 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic010G258300--Sobic003G222600 Sobic010G258300--Sobic007G205600 Sobic009G154600 Sobic009G154600 Sobic010G258300--Sobic009G154600 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic003G030400 Sobic003G030400 Sobic010G258300--Sobic003G030400 Sobic006G220600--Sobic007G205600 Sobic003G422800 Sobic003G422800 Sobic006G220600--Sobic003G422800 Sobic002G163700 Sobic002G163700 Sobic006G220600--Sobic002G163700 Sobic006G220600--Sobic007G110200 Sobic004G210900 Sobic004G210900 Sobic006G220600--Sobic004G210900 Sobic006G220600--Sobic001G450600 Sobic010G189200 Sobic010G189200 Sobic006G220600--Sobic010G189200 Sobic005G138600 Sobic005G138600 Sobic006G220600--Sobic005G138600 Sobic006G220600--Sobic003G222300 Sobic003G222600--Sobic003G030400 Sobic008G148400 Sobic008G148400 Sobic003G222600--Sobic008G148400 Sobic001G114400 Sobic001G114400 Sobic003G222600--Sobic001G114400 Sobic003G222600--Sobic010G258300 Sobic004G070200 Sobic004G070200 Sobic003G222600--Sobic004G070200 Sobic009G137000 Sobic009G137000 Sobic003G222600--Sobic009G137000 Sobic003G222600--Sobic007G205600 Sobic003G222600--Sobic009G233800 Sobic003G222600--Sobic009G036300 Sobic010G211500--Sobic007G227600 Sobic010G211500--Sobic009G036300 Sobic001G207200 Sobic001G207200 Sobic010G211500--Sobic001G207200 Sobic009G052700 Sobic009G052700 Sobic010G211500--Sobic009G052700 Sobic003G084500 Sobic003G084500 Sobic010G211500--Sobic003G084500 Sobic010G211500--Sobic001G450600 Sobic003G334100 Sobic003G334100 Sobic010G211500--Sobic003G334100 Sobic010G183400 Sobic010G183400 Sobic010G211500--Sobic010G183400 Sobic010G074100 Sobic010G074100 Sobic010G211500--Sobic010G074100 Sobic006G214700 Sobic006G214700 Sobic001G450600--Sobic006G214700 Sobic004G333400 Sobic004G333400 Sobic001G450600--Sobic004G333400 Sobic008G063200 Sobic008G063200 Sobic001G450600--Sobic008G063200 Sobic001G450600--Sobic010G183400 Sobic001G450600--Sobic003G084500 Sobic002G331800 Sobic002G331800 Sobic001G450600--Sobic002G331800 Sobic001G450600--Sobic003G286300 Sobic001G450600--Sobic003G334100 Sobic001G450600--Sobic010G189200 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G377000 Sobic001G377000 Sobic001G031300--Sobic001G377000 Sobic001G191200 Sobic001G191200 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200
Octagon: transcription factors


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