Gene annotation
Transcriptome id Sobic.006G220600.3
Synonym GOX, Sb06g029000
Functional annotation - (PubMedID : 26976818)
hydroxyacid oxidase 1, putative, expressed
UniProt C5YG64
Pfam PF01070
Panther DB PTHR10578 PTHR10578:SF72
NCBI CDD -
KEGG Orthology K11517; (S)-2-hydroxy-acid oxidase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G18360 : Aldolase-type TIM barrel family protein
RAP-DB (Rice) LOC_Os04g53210.1 : hydroxyacid oxidase 1, putative, expressed
MaizeGDB (Corn) Zm00025a009718
Brachypodium -
Barley -
Wheat TraesCS2B02G490700 , TraesCS2B02G490700 , TraesCS2A02G467700 , TraesCS2D02G467700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
2 Sobic.003G422800 amino acid permease family protein, putative, expressed -
3 Sobic.002G163700 expressed protein -
4 Sobic.007G110200 wound responsive protein, putative, expressed -
5 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
6 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
7 Sobic.010G189200 pentatricopeptide, putative, expressed -
8 Sobic.005G138600 - -
9 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.003G068600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
12 Sobic.002G362100 expressed protein -
13 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
15 Sobic.006G214700 APO, putative, expressed -
16 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
18 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.009G148900 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
20 Sobic.001G071200 - -


Gene co-expression network
sample Sobic006G220600 Sobic006G220600 Sobic007G205600 Sobic007G205600 Sobic006G220600--Sobic007G205600 Sobic003G422800 Sobic003G422800 Sobic006G220600--Sobic003G422800 Sobic002G163700 Sobic002G163700 Sobic006G220600--Sobic002G163700 Sobic007G110200 Sobic007G110200 Sobic006G220600--Sobic007G110200 Sobic004G210900 Sobic004G210900 Sobic006G220600--Sobic004G210900 Sobic001G450600 Sobic001G450600 Sobic006G220600--Sobic001G450600 Sobic010G189200 Sobic010G189200 Sobic006G220600--Sobic010G189200 Sobic005G138600 Sobic005G138600 Sobic006G220600--Sobic005G138600 Sobic003G222300 Sobic003G222300 Sobic006G220600--Sobic003G222300 Sobic001G388400 Sobic001G388400 Sobic007G205600--Sobic001G388400 Sobic003G170200 Sobic003G170200 Sobic007G205600--Sobic003G170200 Sobic001G537700 Sobic001G537700 Sobic007G205600--Sobic001G537700 Sobic010G258300 Sobic010G258300 Sobic007G205600--Sobic010G258300 Sobic007G205600--Sobic006G220600 Sobic003G222600 Sobic003G222600 Sobic007G205600--Sobic003G222600 Sobic010G211500 Sobic010G211500 Sobic007G205600--Sobic010G211500 Sobic007G205600--Sobic001G450600 Sobic001G031300 Sobic001G031300 Sobic007G205600--Sobic001G031300 Sobic006G060601 Sobic006G060601 Sobic003G422800--Sobic006G060601 Sobic003G422800--Sobic006G220600 Sobic003G068600 Sobic003G068600 Sobic003G422800--Sobic003G068600 Sobic003G422800--Sobic002G163700 Sobic001G121100 Sobic001G121100 Sobic003G422800--Sobic001G121100 Sobic010G207500 Sobic010G207500 Sobic003G422800--Sobic010G207500 Sobic003G422800--Sobic004G210900 Sobic002G287000 Sobic002G287000 Sobic003G422800--Sobic002G287000 Sobic005G175500 Sobic005G175500 Sobic003G422800--Sobic005G175500 Sobic003G439600 Sobic003G439600 Sobic002G163700--Sobic003G439600 Sobic002G163700--Sobic001G450600 Sobic007G227600 Sobic007G227600 Sobic002G163700--Sobic007G227600 Sobic006G214700 Sobic006G214700 Sobic002G163700--Sobic006G214700 Sobic002G250100 Sobic002G250100 Sobic002G163700--Sobic002G250100 Sobic006G197700 Sobic006G197700 Sobic002G163700--Sobic006G197700 Sobic002G386400 Sobic002G386400 Sobic002G163700--Sobic002G386400 Sobic002G038300 Sobic002G038300 Sobic002G163700--Sobic002G038300 Sobic003G245800 Sobic003G245800 Sobic002G163700--Sobic003G245800 Sobic007G110200--Sobic010G258300 Sobic008G073900 Sobic008G073900 Sobic007G110200--Sobic008G073900 Sobic010G000600 Sobic010G000600 Sobic007G110200--Sobic010G000600 Sobic007G110200--Sobic007G205600 Sobic007G110200--Sobic003G222300 Sobic007G110200--Sobic001G031300 Sobic007G110200--Sobic003G222600 Sobic009G154600 Sobic009G154600 Sobic007G110200--Sobic009G154600 Sobic007G110200--Sobic006G220600 Sobic004G183800 Sobic004G183800 Sobic004G210900--Sobic004G183800 Sobic004G210900--Sobic005G175500 Sobic004G210900--Sobic010G000600 Sobic004G210900--Sobic006G060601 Sobic010G030300 Sobic010G030300 Sobic004G210900--Sobic010G030300 Sobic008G146900 Sobic008G146900 Sobic004G210900--Sobic008G146900 Sobic009G213800 Sobic009G213800 Sobic004G210900--Sobic009G213800 Sobic004G181700 Sobic004G181700 Sobic004G210900--Sobic004G181700 Sobic003G014300 Sobic003G014300 Sobic004G210900--Sobic003G014300 Sobic001G450600--Sobic006G214700 Sobic004G333400 Sobic004G333400 Sobic001G450600--Sobic004G333400 Sobic008G063200 Sobic008G063200 Sobic001G450600--Sobic008G063200 Sobic010G183400 Sobic010G183400 Sobic001G450600--Sobic010G183400 Sobic003G084500 Sobic003G084500 Sobic001G450600--Sobic003G084500 Sobic002G331800 Sobic002G331800 Sobic001G450600--Sobic002G331800 Sobic003G286300 Sobic003G286300 Sobic001G450600--Sobic003G286300 Sobic003G334100 Sobic003G334100 Sobic001G450600--Sobic003G334100 Sobic001G450600--Sobic010G189200 Sobic010G189200--Sobic001G450600 Sobic010G189200--Sobic008G063200 Sobic004G298900 Sobic004G298900 Sobic010G189200--Sobic004G298900 Sobic006G258700 Sobic006G258700 Sobic010G189200--Sobic006G258700 Sobic010G189200--Sobic006G214700 Sobic010G189200--Sobic004G183800 Sobic010G189200--Sobic003G014300 Sobic010G189200--Sobic004G333400 Sobic002G102200 Sobic002G102200 Sobic010G189200--Sobic002G102200 Sobic010G197000 Sobic010G197000 Sobic005G138600--Sobic010G197000 Sobic005G138600--Sobic002G331800 Sobic002G354600 Sobic002G354600 Sobic005G138600--Sobic002G354600 Sobic005G138600--Sobic003G439600 Sobic005G138600--Sobic010G211500 Sobic009G052700 Sobic009G052700 Sobic005G138600--Sobic009G052700 Sobic005G138600--Sobic006G214700 Sobic005G138600--Sobic003G245800 Sobic001G071200 Sobic001G071200 Sobic005G138600--Sobic001G071200 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic009G213400 Sobic009G213400 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300
Octagon: transcription factors


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