Gene annotation
Transcriptome id Sobic.001G071200.1
Synonym
Functional annotation -
UniProt A0A1B6QHQ0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G268500 9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
2 Sobic.005G138600 - -
3 Sobic.002G331800 PPR repeat containing protein, expressed -
4 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
5 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
6 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.006G214700 APO, putative, expressed -
8 Sobic.002G025700 lectin-like receptor kinase, putative, expressed -
9 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
10 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
11 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
12 Sobic.004G298900 OR, putative, expressed -
13 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
14 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase
15 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
16 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
17 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
18 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
19 Sobic.002G163700 expressed protein -
20 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -


Gene co-expression network
sample Sobic001G071200 Sobic001G071200 Sobic004G268500 Sobic004G268500 Sobic001G071200--Sobic004G268500 Sobic005G138600 Sobic005G138600 Sobic001G071200--Sobic005G138600 Sobic002G331800 Sobic002G331800 Sobic001G071200--Sobic002G331800 Sobic010G076800 Sobic010G076800 Sobic001G071200--Sobic010G076800 Sobic003G284800 Sobic003G284800 Sobic001G071200--Sobic003G284800 Sobic002G354600 Sobic002G354600 Sobic001G071200--Sobic002G354600 Sobic006G214700 Sobic006G214700 Sobic001G071200--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic001G071200--Sobic002G025700 Sobic003G253300 Sobic003G253300 Sobic001G071200--Sobic003G253300 Sobic006G123500 Sobic006G123500 Sobic004G268500--Sobic006G123500 Sobic008G065200 Sobic008G065200 Sobic004G268500--Sobic008G065200 Sobic004G268500--Sobic003G284800 Sobic001G404500 Sobic001G404500 Sobic004G268500--Sobic001G404500 Sobic004G268500--Sobic001G071200 Sobic003G292600 Sobic003G292600 Sobic004G268500--Sobic003G292600 Sobic002G046900 Sobic002G046900 Sobic004G268500--Sobic002G046900 Sobic004G268500--Sobic002G025700 Sobic002G362100 Sobic002G362100 Sobic004G268500--Sobic002G362100 Sobic010G197000 Sobic010G197000 Sobic005G138600--Sobic010G197000 Sobic005G138600--Sobic002G331800 Sobic005G138600--Sobic002G354600 Sobic003G439600 Sobic003G439600 Sobic005G138600--Sobic003G439600 Sobic010G211500 Sobic010G211500 Sobic005G138600--Sobic010G211500 Sobic009G052700 Sobic009G052700 Sobic005G138600--Sobic009G052700 Sobic005G138600--Sobic006G214700 Sobic003G245800 Sobic003G245800 Sobic005G138600--Sobic003G245800 Sobic005G138600--Sobic001G071200 Sobic002G331800--Sobic010G076800 Sobic002G331800--Sobic006G214700 Sobic002G331800--Sobic003G439600 Sobic004G333400 Sobic004G333400 Sobic002G331800--Sobic004G333400 Sobic010G183400 Sobic010G183400 Sobic002G331800--Sobic010G183400 Sobic001G118400 Sobic001G118400 Sobic002G331800--Sobic001G118400 Sobic001G450600 Sobic001G450600 Sobic002G331800--Sobic001G450600 Sobic003G125900 Sobic003G125900 Sobic002G331800--Sobic003G125900 Sobic002G331800--Sobic003G245800 Sobic010G076800--Sobic002G331800 Sobic001G006000 Sobic001G006000 Sobic010G076800--Sobic001G006000 Sobic007G076900 Sobic007G076900 Sobic010G076800--Sobic007G076900 Sobic010G076800--Sobic006G214700 Sobic008G063200 Sobic008G063200 Sobic010G076800--Sobic008G063200 Sobic010G076800--Sobic003G253300 Sobic006G193200 Sobic006G193200 Sobic010G076800--Sobic006G193200 Sobic003G037300 Sobic003G037300 Sobic010G076800--Sobic003G037300 Sobic003G179400 Sobic003G179400 Sobic010G076800--Sobic003G179400 Sobic002G112400 Sobic002G112400 Sobic003G284800--Sobic002G112400 Sobic009G062400 Sobic009G062400 Sobic003G284800--Sobic009G062400 Sobic003G284800--Sobic003G253300 Sobic006G265900 Sobic006G265900 Sobic003G284800--Sobic006G265900 Sobic002G061900 Sobic002G061900 Sobic003G284800--Sobic002G061900 Sobic006G097500 Sobic006G097500 Sobic003G284800--Sobic006G097500 Sobic007G053800 Sobic007G053800 Sobic003G284800--Sobic007G053800 Sobic001G128600 Sobic001G128600 Sobic003G284800--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic003G284800--Sobic008G006100 Sobic002G354600--Sobic010G197000 Sobic004G300000 Sobic004G300000 Sobic002G354600--Sobic004G300000 Sobic002G354600--Sobic005G138600 Sobic009G014100 Sobic009G014100 Sobic002G354600--Sobic009G014100 Sobic002G354600--Sobic002G025700 Sobic010G035500 Sobic010G035500 Sobic002G354600--Sobic010G035500 Sobic003G108900 Sobic003G108900 Sobic002G354600--Sobic003G108900 Sobic002G354600--Sobic002G331800 Sobic004G298900 Sobic004G298900 Sobic002G354600--Sobic004G298900 Sobic006G214700--Sobic003G179400 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G110900 Sobic006G110900 Sobic006G214700--Sobic006G110900 Sobic006G214700--Sobic004G333400 Sobic006G214700--Sobic003G253300 Sobic006G214700--Sobic008G063200 Sobic006G214700--Sobic010G076800 Sobic002G025700--Sobic004G300000 Sobic004G089200 Sobic004G089200 Sobic002G025700--Sobic004G089200 Sobic002G025700--Sobic010G035500 Sobic003G359500 Sobic003G359500 Sobic002G025700--Sobic003G359500 Sobic010G207500 Sobic010G207500 Sobic002G025700--Sobic010G207500 Sobic002G025700--Sobic002G354600 Sobic004G165900 Sobic004G165900 Sobic002G025700--Sobic004G165900 Sobic010G205700 Sobic010G205700 Sobic002G025700--Sobic010G205700 Sobic002G025700--Sobic006G193200 Sobic003G342200 Sobic003G342200 Sobic003G253300--Sobic003G342200 Sobic003G253300--Sobic006G110900 Sobic006G155500 Sobic006G155500 Sobic003G253300--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic003G253300--Sobic006G050400 Sobic003G253300--Sobic006G214700 Sobic003G253300--Sobic003G284800 Sobic003G253300--Sobic008G063200 Sobic003G253300--Sobic001G118400 Sobic003G253300--Sobic010G076800
Octagon: transcription factors


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