Gene annotation
Transcriptome id Sobic.010G076800.1
Synonym Sb10g006650
Functional annotation ferredoxin thioredoxin reductase catalytic beta chain family protein (PubMedID : 26465154)
ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed
UniProt C5Z6B7
Pfam PF02943
Panther DB PTHR35113 PTHR35113:SF1
NCBI CDD -
KEGG Orthology K17892; ferredoxin-thioredoxin reductase catalytic chain
Gene Ontology GO:0016730; oxidoreductase activity, acting on iron-sulfur proteins as donors


Orthologs (automatic annotation)
TAIR AT2G04700 : ferredoxin thioredoxin reductase catalytic beta chain family protein
RAP-DB (Rice) LOC_Os09g07570.1 : ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a049630
Brachypodium PNT65649
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G076800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G331800 PPR repeat containing protein, expressed -
2 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
3 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
4 Sobic.006G214700 APO, putative, expressed -
5 Sobic.008G063200 expressed protein -
6 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
7 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
8 Sobic.003G037300 Twin LOV 1, putative, expressed -
9 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
10 Sobic.004G179200 expressed protein -
11 Sobic.008G006100 MATE efflux protein, putative, expressed -
12 Sobic.004G298900 OR, putative, expressed -
13 Sobic.004G333400 COBW domain containing protein, putative, expressed -
14 Sobic.005G111500 FHA domain containing protein, putative, expressed -
15 Sobic.001G283700 acyltransferase, putative, expressed K00630: glycerol-3-phosphate O-acyltransferase
16 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
17 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
18 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
19 Sobic.001G535700 stress responsive A/B Barrel domain containing protein, expressed -
20 Sobic.004G253400 tic20 protein-related, putative, expressed -


Gene co-expression network
sample Sobic010G076800 Sobic010G076800 Sobic002G331800 Sobic002G331800 Sobic010G076800--Sobic002G331800 Sobic001G006000 Sobic001G006000 Sobic010G076800--Sobic001G006000 Sobic007G076900 Sobic007G076900 Sobic010G076800--Sobic007G076900 Sobic006G214700 Sobic006G214700 Sobic010G076800--Sobic006G214700 Sobic008G063200 Sobic008G063200 Sobic010G076800--Sobic008G063200 Sobic003G253300 Sobic003G253300 Sobic010G076800--Sobic003G253300 Sobic006G193200 Sobic006G193200 Sobic010G076800--Sobic006G193200 Sobic003G037300 Sobic003G037300 Sobic010G076800--Sobic003G037300 Sobic003G179400 Sobic003G179400 Sobic010G076800--Sobic003G179400 Sobic002G331800--Sobic010G076800 Sobic002G331800--Sobic006G214700 Sobic003G439600 Sobic003G439600 Sobic002G331800--Sobic003G439600 Sobic004G333400 Sobic004G333400 Sobic002G331800--Sobic004G333400 Sobic010G183400 Sobic010G183400 Sobic002G331800--Sobic010G183400 Sobic001G118400 Sobic001G118400 Sobic002G331800--Sobic001G118400 Sobic001G450600 Sobic001G450600 Sobic002G331800--Sobic001G450600 Sobic003G125900 Sobic003G125900 Sobic002G331800--Sobic003G125900 Sobic003G245800 Sobic003G245800 Sobic002G331800--Sobic003G245800 Sobic001G006000--Sobic010G076800 Sobic009G028400 Sobic009G028400 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic001G006000--Sobic007G076900 Sobic004G179200 Sobic004G179200 Sobic001G006000--Sobic004G179200 Sobic001G339100 Sobic001G339100 Sobic001G006000--Sobic001G339100 Sobic001G006000--Sobic003G253300 Sobic001G006000--Sobic003G245800 Sobic007G076900--Sobic010G076800 Sobic007G076900--Sobic001G006000 Sobic007G076900--Sobic008G063200 Sobic005G111500 Sobic005G111500 Sobic007G076900--Sobic005G111500 Sobic007G076900--Sobic003G179400 Sobic007G076900--Sobic009G028400 Sobic009G062500 Sobic009G062500 Sobic007G076900--Sobic009G062500 Sobic001G525900 Sobic001G525900 Sobic007G076900--Sobic001G525900 Sobic007G076900--Sobic001G339100 Sobic006G214700--Sobic003G179400 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G110900 Sobic006G110900 Sobic006G214700--Sobic006G110900 Sobic006G214700--Sobic004G333400 Sobic006G214700--Sobic003G253300 Sobic006G214700--Sobic008G063200 Sobic006G214700--Sobic010G076800 Sobic008G063200--Sobic001G450600 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic008G063200--Sobic001G006000 Sobic002G102200 Sobic002G102200 Sobic008G063200--Sobic002G102200 Sobic008G063200--Sobic003G253300 Sobic008G063200--Sobic010G076800 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200 Sobic003G253300--Sobic003G342200 Sobic003G253300--Sobic006G110900 Sobic006G155500 Sobic006G155500 Sobic003G253300--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic003G253300--Sobic006G050400 Sobic003G253300--Sobic006G214700 Sobic003G284800 Sobic003G284800 Sobic003G253300--Sobic003G284800 Sobic003G253300--Sobic008G063200 Sobic003G253300--Sobic001G118400 Sobic003G253300--Sobic010G076800 Sobic004G300000 Sobic004G300000 Sobic006G193200--Sobic004G300000 Sobic004G165900 Sobic004G165900 Sobic006G193200--Sobic004G165900 Sobic006G193200--Sobic006G214700 Sobic006G193200--Sobic001G118400 Sobic006G193200--Sobic010G076800 Sobic006G193200--Sobic002G331800 Sobic006G140700 Sobic006G140700 Sobic006G193200--Sobic006G140700 Sobic003G328100 Sobic003G328100 Sobic006G193200--Sobic003G328100 Sobic010G035500 Sobic010G035500 Sobic006G193200--Sobic010G035500 Sobic004G298900 Sobic004G298900 Sobic003G037300--Sobic004G298900 Sobic009G062400 Sobic009G062400 Sobic003G037300--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic003G037300--Sobic008G006100 Sobic010G269400 Sobic010G269400 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic001G286600 Sobic001G286600 Sobic003G037300--Sobic001G286600 Sobic003G179400--Sobic006G214700 Sobic010G231100 Sobic010G231100 Sobic003G179400--Sobic010G231100 Sobic003G179400--Sobic005G028900 Sobic003G179400--Sobic010G076800 Sobic003G179400--Sobic004G333400 Sobic003G179400--Sobic001G450600 Sobic003G179400--Sobic008G063200 Sobic003G179400--Sobic002G331800 Sobic003G179400--Sobic006G110900
Octagon: transcription factors


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