Gene annotation
Transcriptome id Sobic.003G253300.2,Sobic.003G253300.1
Synonym Sb03g030860
Functional annotation ATP synthase protein I related, putative, expressed
UniProt A0A097PRJ5 , A0A1B6Q5D4
Pfam -
Panther DB PTHR34118 PTHR34118:SF3
NCBI CDD -
KEGG Orthology K02116; ATP synthase protein I
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31040 : ATP synthase protein I -related
RAP-DB (Rice) LOC_Os01g48300.1 : ATP synthase protein I related, putative, expressed
MaizeGDB (Corn) Zm00025a038796
Brachypodium KQK09148
Barley HORVU3Hr1G061850.13 , HORVU3Hr1G061850.12 , HORVU3Hr1G061850.11 , HORVU3Hr1G061850.14 , HORVU3Hr1G061850.9 , HORVU3Hr1G061850.8 , HORVU3Hr1G061850.3 , HORVU3Hr1G061850.2 , HORVU3Hr1G061850.1 , HORVU3Hr1G061850.7 , HORVU3Hr1G061850.6 , HORVU3Hr1G061850.5 , HORVU3Hr1G061850.4
Wheat TraesCS3B02G305300 , TraesCS3A02G271600 , TraesCS3A02G271600 , TraesCS3D02G271200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
2 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.006G155500 expressed protein -
4 Sobic.006G050400 expressed protein -
5 Sobic.006G214700 APO, putative, expressed -
6 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
7 Sobic.008G063200 expressed protein -
8 Sobic.001G118400 expressed protein -
9 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
10 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
11 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
12 Sobic.003G328100 expressed protein -
13 Sobic.002G331800 PPR repeat containing protein, expressed -
14 Sobic.004G253400 tic20 protein-related, putative, expressed -
15 Sobic.001G128600 -(PubMedID : 26465154)@DUF1517 domain containing protein, putative, expressed -
16 Sobic.003G378600 "oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor"(PubMedID : 26465154)@NADH dehydrogenase I subunit N, putative, expressed -
17 Sobic.010G056300 PPR repeat domain containing protein, putative, expressed -
18 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
19 Sobic.001G175700 expressed protein -
20 Sobic.008G006100 MATE efflux protein, putative, expressed -


Gene co-expression network
sample Sobic003G253300 Sobic003G253300 Sobic003G342200 Sobic003G342200 Sobic003G253300--Sobic003G342200 Sobic006G110900 Sobic006G110900 Sobic003G253300--Sobic006G110900 Sobic006G155500 Sobic006G155500 Sobic003G253300--Sobic006G155500 Sobic006G050400 Sobic006G050400 Sobic003G253300--Sobic006G050400 Sobic006G214700 Sobic006G214700 Sobic003G253300--Sobic006G214700 Sobic003G284800 Sobic003G284800 Sobic003G253300--Sobic003G284800 Sobic008G063200 Sobic008G063200 Sobic003G253300--Sobic008G063200 Sobic001G118400 Sobic001G118400 Sobic003G253300--Sobic001G118400 Sobic010G076800 Sobic010G076800 Sobic003G253300--Sobic010G076800 Sobic003G342200--Sobic006G050400 Sobic003G342200--Sobic003G253300 Sobic001G175700 Sobic001G175700 Sobic003G342200--Sobic001G175700 Sobic003G342200--Sobic006G155500 Sobic001G122300 Sobic001G122300 Sobic003G342200--Sobic001G122300 Sobic003G378600 Sobic003G378600 Sobic003G342200--Sobic003G378600 Sobic002G112400 Sobic002G112400 Sobic003G342200--Sobic002G112400 Sobic006G125000 Sobic006G125000 Sobic003G342200--Sobic006G125000 Sobic002G102200 Sobic002G102200 Sobic003G342200--Sobic002G102200 Sobic006G110900--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic006G110900--Sobic001G286600 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G110900--Sobic006G050400 Sobic006G155500--Sobic001G118400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G155500--Sobic006G110900 Sobic002G061900 Sobic002G061900 Sobic006G155500--Sobic002G061900 Sobic003G070900 Sobic003G070900 Sobic006G155500--Sobic003G070900 Sobic006G097500 Sobic006G097500 Sobic006G155500--Sobic006G097500 Sobic006G050400--Sobic003G342200 Sobic006G050400--Sobic006G155500 Sobic006G050400--Sobic001G175700 Sobic006G050400--Sobic002G112400 Sobic006G050400--Sobic003G253300 Sobic001G005200 Sobic001G005200 Sobic006G050400--Sobic001G005200 Sobic009G059300 Sobic009G059300 Sobic006G050400--Sobic009G059300 Sobic006G050400--Sobic002G102200 Sobic006G050400--Sobic001G122300 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic001G450600 Sobic001G450600 Sobic006G214700--Sobic001G450600 Sobic002G331800 Sobic002G331800 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic006G214700--Sobic003G253300 Sobic006G214700--Sobic008G063200 Sobic006G214700--Sobic010G076800 Sobic003G284800--Sobic002G112400 Sobic009G062400 Sobic009G062400 Sobic003G284800--Sobic009G062400 Sobic003G284800--Sobic003G253300 Sobic006G265900 Sobic006G265900 Sobic003G284800--Sobic006G265900 Sobic003G284800--Sobic002G061900 Sobic003G284800--Sobic006G097500 Sobic007G053800 Sobic007G053800 Sobic003G284800--Sobic007G053800 Sobic001G128600 Sobic001G128600 Sobic003G284800--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic003G284800--Sobic008G006100 Sobic008G063200--Sobic001G450600 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic001G006000 Sobic001G006000 Sobic008G063200--Sobic001G006000 Sobic008G063200--Sobic002G102200 Sobic008G063200--Sobic003G253300 Sobic008G063200--Sobic010G076800 Sobic008G063200--Sobic004G333400 Sobic008G063200--Sobic003G342200 Sobic001G118400--Sobic006G155500 Sobic001G118400--Sobic003G070900 Sobic001G118400--Sobic003G328100 Sobic004G165900 Sobic004G165900 Sobic001G118400--Sobic004G165900 Sobic001G118400--Sobic001G286600 Sobic001G118400--Sobic002G061900 Sobic010G056300 Sobic010G056300 Sobic001G118400--Sobic010G056300 Sobic004G252500 Sobic004G252500 Sobic001G118400--Sobic004G252500 Sobic006G140700 Sobic006G140700 Sobic001G118400--Sobic006G140700 Sobic010G076800--Sobic002G331800 Sobic010G076800--Sobic001G006000 Sobic007G076900 Sobic007G076900 Sobic010G076800--Sobic007G076900 Sobic010G076800--Sobic006G214700 Sobic010G076800--Sobic008G063200 Sobic010G076800--Sobic003G253300 Sobic006G193200 Sobic006G193200 Sobic010G076800--Sobic006G193200 Sobic003G037300 Sobic003G037300 Sobic010G076800--Sobic003G037300 Sobic010G076800--Sobic003G179400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.