Gene annotation
Transcriptome id Sobic.004G210900.1
Synonym Sb04g025630
Functional annotation auxin efflux carrier component, putative, expressed
UniProt C5XXA5
Pfam PF03547
Panther DB PTHR31419 PTHR31419:SF2
NCBI CDD KOG2722; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G71090 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os08g09190.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a031907
Brachypodium KQK11734 , KQK11733
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
2 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
4 Sobic.006G060601 - -
5 Sobic.010G030300 serine threonine kinase, putative, expressed -
6 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
7 Sobic.009G213800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@DUF1230 domain containing protein, expressed -
8 Sobic.004G181700 calmodulin binding protein, putative, expressed -
9 Sobic.003G014300 expressed protein -
10 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
11 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -
12 Sobic.006G220600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
13 Sobic.010G077400 nitrilase, putative, expressed K13566: NIT2, omega-amidase
14 Sobic.002G163700 expressed protein -
15 Sobic.010G189200 pentatricopeptide, putative, expressed -
16 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
17 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
18 Sobic.003G422800 amino acid permease family protein, putative, expressed -
19 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.002G125900 ORM1, putative, expressed -


Gene co-expression network
sample Sobic004G210900 Sobic004G210900 Sobic004G183800 Sobic004G183800 Sobic004G210900--Sobic004G183800 Sobic005G175500 Sobic005G175500 Sobic004G210900--Sobic005G175500 Sobic010G000600 Sobic010G000600 Sobic004G210900--Sobic010G000600 Sobic006G060601 Sobic006G060601 Sobic004G210900--Sobic006G060601 Sobic010G030300 Sobic010G030300 Sobic004G210900--Sobic010G030300 Sobic008G146900 Sobic008G146900 Sobic004G210900--Sobic008G146900 Sobic009G213800 Sobic009G213800 Sobic004G210900--Sobic009G213800 Sobic004G181700 Sobic004G181700 Sobic004G210900--Sobic004G181700 Sobic003G014300 Sobic003G014300 Sobic004G210900--Sobic003G014300 Sobic010G189200 Sobic010G189200 Sobic004G183800--Sobic010G189200 Sobic004G183800--Sobic004G210900 Sobic004G183800--Sobic005G175500 Sobic010G109600 Sobic010G109600 Sobic004G183800--Sobic010G109600 Sobic001G043800 Sobic001G043800 Sobic004G183800--Sobic001G043800 Sobic001G300100 Sobic001G300100 Sobic004G183800--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic004G183800--Sobic009G193500 Sobic008G063200 Sobic008G063200 Sobic004G183800--Sobic008G063200 Sobic002G276100 Sobic002G276100 Sobic004G183800--Sobic002G276100 Sobic005G175500--Sobic003G014300 Sobic006G258700 Sobic006G258700 Sobic005G175500--Sobic006G258700 Sobic005G175600 Sobic005G175600 Sobic005G175500--Sobic005G175600 Sobic004G300000 Sobic004G300000 Sobic005G175500--Sobic004G300000 Sobic005G175500--Sobic006G060601 Sobic001G224900 Sobic001G224900 Sobic005G175500--Sobic001G224900 Sobic001G404500 Sobic001G404500 Sobic005G175500--Sobic001G404500 Sobic009G019100 Sobic009G019100 Sobic005G175500--Sobic009G019100 Sobic010G207500 Sobic010G207500 Sobic005G175500--Sobic010G207500 Sobic004G131040 Sobic004G131040 Sobic010G000600--Sobic004G131040 Sobic007G110200 Sobic007G110200 Sobic010G000600--Sobic007G110200 Sobic006G153900 Sobic006G153900 Sobic010G000600--Sobic006G153900 Sobic010G000600--Sobic001G300100 Sobic010G000600--Sobic009G193500 Sobic010G000600--Sobic004G210900 Sobic003G381200 Sobic003G381200 Sobic010G000600--Sobic003G381200 Sobic010G000600--Sobic002G276100 Sobic002G181300 Sobic002G181300 Sobic010G000600--Sobic002G181300 Sobic006G060601--Sobic009G213800 Sobic010G077400 Sobic010G077400 Sobic006G060601--Sobic010G077400 Sobic001G275500 Sobic001G275500 Sobic006G060601--Sobic001G275500 Sobic006G060601--Sobic005G175500 Sobic003G422800 Sobic003G422800 Sobic006G060601--Sobic003G422800 Sobic006G060601--Sobic010G207500 Sobic003G359500 Sobic003G359500 Sobic006G060601--Sobic003G359500 Sobic006G060601--Sobic009G019100 Sobic002G025700 Sobic002G025700 Sobic006G060601--Sobic002G025700 Sobic010G231100 Sobic010G231100 Sobic010G030300--Sobic010G231100 Sobic009G141400 Sobic009G141400 Sobic010G030300--Sobic009G141400 Sobic010G030300--Sobic004G210900 Sobic010G030300--Sobic010G207500 Sobic010G030300--Sobic004G300000 Sobic010G035500 Sobic010G035500 Sobic010G030300--Sobic010G035500 Sobic009G079950 Sobic009G079950 Sobic010G030300--Sobic009G079950 Sobic003G179400 Sobic003G179400 Sobic010G030300--Sobic003G179400 Sobic006G214700 Sobic006G214700 Sobic010G030300--Sobic006G214700 Sobic010G184600 Sobic010G184600 Sobic008G146900--Sobic010G184600 Sobic008G146900--Sobic002G276100 Sobic001G159400 Sobic001G159400 Sobic008G146900--Sobic001G159400 Sobic010G196500 Sobic010G196500 Sobic008G146900--Sobic010G196500 Sobic008G146900--Sobic004G181700 Sobic008G144800 Sobic008G144800 Sobic008G146900--Sobic008G144800 Sobic004G189900 Sobic004G189900 Sobic008G146900--Sobic004G189900 Sobic002G193100 Sobic002G193100 Sobic008G146900--Sobic002G193100 Sobic008G146900--Sobic003G014300 Sobic009G213800--Sobic009G019100 Sobic009G213800--Sobic001G275500 Sobic009G213800--Sobic006G060601 Sobic001G029200 Sobic001G029200 Sobic009G213800--Sobic001G029200 Sobic009G213800--Sobic010G035500 Sobic009G213800--Sobic003G359500 Sobic006G201100 Sobic006G201100 Sobic009G213800--Sobic006G201100 Sobic002G046900 Sobic002G046900 Sobic009G213800--Sobic002G046900 Sobic009G213800--Sobic004G300000 Sobic004G317100 Sobic004G317100 Sobic004G181700--Sobic004G317100 Sobic004G181700--Sobic002G276100 Sobic004G181700--Sobic001G159400 Sobic004G181600 Sobic004G181600 Sobic004G181700--Sobic004G181600 Sobic004G181700--Sobic008G146900 Sobic001G191600 Sobic001G191600 Sobic004G181700--Sobic001G191600 Sobic009G097200 Sobic009G097200 Sobic004G181700--Sobic009G097200 Sobic006G086500 Sobic006G086500 Sobic004G181700--Sobic006G086500 Sobic008G172300 Sobic008G172300 Sobic004G181700--Sobic008G172300 Sobic003G014300--Sobic006G258700 Sobic004G298900 Sobic004G298900 Sobic003G014300--Sobic004G298900 Sobic010G269400 Sobic010G269400 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G037300 Sobic003G037300 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic003G014300--Sobic005G175500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500
Octagon: transcription factors


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