Gene annotation
Transcriptome id Sobic.002G125900.1
Synonym Sb02g010850
Functional annotation ORM1, putative, expressed
UniProt C5X557
Pfam PF04061
Panther DB PTHR12665 PTHR12665:SF15
NCBI CDD KOG3319; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0005789endoplasmic reticulum membrane


Orthologs (automatic annotation)
TAIR AT1G01230 : ORMDL family protein
RAP-DB (Rice) LOC_Os07g26940.1 : ORM1, putative, expressed
MaizeGDB (Corn) Zm00025a045853 , Zm00025a013542
Brachypodium KQK16428 , KQJ84090
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G125900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263000 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
2 Sobic.007G120401 - -
3 Sobic.001G351400 Metacaspase 1("PubMedID : 26759170,PubMedID : 24597475")@ICE-like protease p20 domain containing protein, putative, expressed -
4 Sobic.002G404200 F-box domain containing protein, expressed -
5 Sobic.002G040800 CAMK_CAMK_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
6 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
8 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
9 Sobic.003G314500 expressed protein -
10 Sobic.007G110200 wound responsive protein, putative, expressed -
11 Sobic.003G054200 thioredoxin, putative, expressed K03671: thioredoxin 1
12 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
13 Sobic.002G181300 expressed protein -
14 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
15 Sobic.003G359900 C2 domain containing protein, expressed -
16 Sobic.006G220600 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
17 Sobic.004G189900 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed K13418: somatic embryogenesis receptor kinase 1
18 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
19 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.003G408400 PCF-like (ClassI) Subclade 3 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic002G125900 Sobic002G125900 Sobic006G263000 Sobic006G263000 Sobic002G125900--Sobic006G263000 Sobic007G120401 Sobic007G120401 Sobic002G125900--Sobic007G120401 Sobic001G351400 Sobic001G351400 Sobic002G125900--Sobic001G351400 Sobic002G404200 Sobic002G404200 Sobic002G125900--Sobic002G404200 Sobic002G040800 Sobic002G040800 Sobic002G125900--Sobic002G040800 Sobic003G222300 Sobic003G222300 Sobic002G125900--Sobic003G222300 Sobic008G146900 Sobic008G146900 Sobic002G125900--Sobic008G146900 Sobic004G210900 Sobic004G210900 Sobic002G125900--Sobic004G210900 Sobic003G314500 Sobic003G314500 Sobic002G125900--Sobic003G314500 Sobic002G309800 Sobic002G309800 Sobic006G263000--Sobic002G309800 Sobic006G263000--Sobic002G125900 Sobic001G031300 Sobic001G031300 Sobic006G263000--Sobic001G031300 Sobic001G222900 Sobic001G222900 Sobic006G263000--Sobic001G222900 Sobic005G110475 Sobic005G110475 Sobic006G263000--Sobic005G110475 Sobic001G298600 Sobic001G298600 Sobic006G263000--Sobic001G298600 Sobic001G222250 Sobic001G222250 Sobic006G263000--Sobic001G222250 Sobic002G234700 Sobic002G234700 Sobic006G263000--Sobic002G234700 Sobic006G263000--Sobic002G040800 Sobic007G148200 Sobic007G148200 Sobic007G120401--Sobic007G148200 Sobic001G372500 Sobic001G372500 Sobic007G120401--Sobic001G372500 Sobic009G154600 Sobic009G154600 Sobic007G120401--Sobic009G154600 Sobic007G202800 Sobic007G202800 Sobic007G120401--Sobic007G202800 Sobic004G275200 Sobic004G275200 Sobic007G120401--Sobic004G275200 Sobic007G120401--Sobic002G125900 Sobic001G191200 Sobic001G191200 Sobic007G120401--Sobic001G191200 Sobic008G001400 Sobic008G001400 Sobic007G120401--Sobic008G001400 Sobic002G273700 Sobic002G273700 Sobic007G120401--Sobic002G273700 Sobic006G258700 Sobic006G258700 Sobic001G351400--Sobic006G258700 Sobic009G189000 Sobic009G189000 Sobic001G351400--Sobic009G189000 Sobic001G102300 Sobic001G102300 Sobic001G351400--Sobic001G102300 Sobic002G362100 Sobic002G362100 Sobic001G351400--Sobic002G362100 Sobic010G207500 Sobic010G207500 Sobic001G351400--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic001G351400--Sobic001G404500 Sobic010G184600 Sobic010G184600 Sobic001G351400--Sobic010G184600 Sobic003G410900 Sobic003G410900 Sobic001G351400--Sobic003G410900 Sobic001G525900 Sobic001G525900 Sobic001G351400--Sobic001G525900 Sobic001G300100 Sobic001G300100 Sobic002G404200--Sobic001G300100 Sobic002G142066 Sobic002G142066 Sobic002G404200--Sobic002G142066 Sobic010G100800 Sobic010G100800 Sobic002G404200--Sobic010G100800 Sobic007G029100 Sobic007G029100 Sobic002G404200--Sobic007G029100 Sobic008G193300 Sobic008G193300 Sobic002G404200--Sobic008G193300 Sobic010G086900 Sobic010G086900 Sobic002G404200--Sobic010G086900 Sobic001G341800 Sobic001G341800 Sobic002G404200--Sobic001G341800 Sobic001G279900 Sobic001G279900 Sobic002G404200--Sobic001G279900 Sobic009G004800 Sobic009G004800 Sobic002G404200--Sobic009G004800 Sobic010G228700 Sobic010G228700 Sobic002G040800--Sobic010G228700 Sobic009G094800 Sobic009G094800 Sobic002G040800--Sobic009G094800 Sobic001G544500 Sobic001G544500 Sobic002G040800--Sobic001G544500 Sobic002G174900 Sobic002G174900 Sobic002G040800--Sobic002G174900 Sobic002G040800--Sobic008G001400 Sobic004G135300 Sobic004G135300 Sobic002G040800--Sobic004G135300 Sobic006G042200 Sobic006G042200 Sobic002G040800--Sobic006G042200 Sobic003G368800 Sobic003G368800 Sobic002G040800--Sobic003G368800 Sobic002G040800--Sobic006G263000 Sobic010G258300 Sobic010G258300 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic009G213400 Sobic009G213400 Sobic003G222300--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic008G146900--Sobic010G184600 Sobic002G276100 Sobic002G276100 Sobic008G146900--Sobic002G276100 Sobic001G159400 Sobic001G159400 Sobic008G146900--Sobic001G159400 Sobic010G196500 Sobic010G196500 Sobic008G146900--Sobic010G196500 Sobic004G181700 Sobic004G181700 Sobic008G146900--Sobic004G181700 Sobic008G144800 Sobic008G144800 Sobic008G146900--Sobic008G144800 Sobic004G189900 Sobic004G189900 Sobic008G146900--Sobic004G189900 Sobic002G193100 Sobic002G193100 Sobic008G146900--Sobic002G193100 Sobic003G014300 Sobic003G014300 Sobic008G146900--Sobic003G014300 Sobic004G183800 Sobic004G183800 Sobic004G210900--Sobic004G183800 Sobic005G175500 Sobic005G175500 Sobic004G210900--Sobic005G175500 Sobic010G000600 Sobic010G000600 Sobic004G210900--Sobic010G000600 Sobic006G060601 Sobic006G060601 Sobic004G210900--Sobic006G060601 Sobic010G030300 Sobic010G030300 Sobic004G210900--Sobic010G030300 Sobic004G210900--Sobic008G146900 Sobic009G213800 Sobic009G213800 Sobic004G210900--Sobic009G213800 Sobic004G210900--Sobic004G181700 Sobic004G210900--Sobic003G014300 Sobic001G053000 Sobic001G053000 Sobic003G314500--Sobic001G053000 Sobic010G265800 Sobic010G265800 Sobic003G314500--Sobic010G265800 Sobic006G004600 Sobic006G004600 Sobic003G314500--Sobic006G004600 Sobic003G314500--Sobic002G125900 Sobic003G314500--Sobic008G146900 Sobic005G032300 Sobic005G032300 Sobic003G314500--Sobic005G032300 Sobic001G427500 Sobic001G427500 Sobic003G314500--Sobic001G427500 Sobic003G314500--Sobic004G210900 Sobic003G206800 Sobic003G206800 Sobic003G314500--Sobic003G206800
Octagon: transcription factors


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