Gene annotation
Transcriptome id Sobic.003G314500.1
Synonym Sb03g036220
Functional annotation expressed protein
UniProt A0A1W0VZW9
Pfam -
Panther DB PTHR36737 PTHR36737:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36835 : -
RAP-DB (Rice) LOC_Os01g56890.1 : expressed protein
MaizeGDB (Corn) Zm00025a039904 , Zm00025a027329
Brachypodium KQK10034
Barley HORVU3Hr1G076080.2 , HORVU3Hr1G076080.5 , HORVU3Hr1G076080.6
Wheat TraesCS3B02G345900
Populus -


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cDNA sequences
Sobic.003G314500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G053000 small multi-drug export protein, putative, expressed -
2 Sobic.010G265800 tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.006G004600 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
4 Sobic.002G125900 ORM1, putative, expressed -
5 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
6 Sobic.005G032300 ubiquitin-like protein 5, putative, expressed K13113: UBL5, ubiquitin-like protein 5
7 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
8 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
9 Sobic.003G206800 DUF538 domain containing protein, putative, expressed -
10 Sobic.003G408400 PCF-like (ClassI) Subclade 3 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
11 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
12 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
13 Sobic.010G184600 Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
14 Sobic.003G022600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid permease family protein, putative, expressed -
15 Sobic.003G261900 expressed protein -
16 Sobic.010G277100 regulator of ribonuclease, putative, expressed -
17 Sobic.007G148200 auxin-repressed protein, putative, expressed -
18 Sobic.001G387600 ethylene-insensitive 3, putative, expressed K14514: ethylene-insensitive protein 3
19 Sobic.007G062500 expressed protein -
20 Sobic.006G160300 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G314500 Sobic003G314500 Sobic001G053000 Sobic001G053000 Sobic003G314500--Sobic001G053000 Sobic010G265800 Sobic010G265800 Sobic003G314500--Sobic010G265800 Sobic006G004600 Sobic006G004600 Sobic003G314500--Sobic006G004600 Sobic002G125900 Sobic002G125900 Sobic003G314500--Sobic002G125900 Sobic008G146900 Sobic008G146900 Sobic003G314500--Sobic008G146900 Sobic005G032300 Sobic005G032300 Sobic003G314500--Sobic005G032300 Sobic001G427500 Sobic001G427500 Sobic003G314500--Sobic001G427500 Sobic004G210900 Sobic004G210900 Sobic003G314500--Sobic004G210900 Sobic003G206800 Sobic003G206800 Sobic003G314500--Sobic003G206800 Sobic001G043800 Sobic001G043800 Sobic001G053000--Sobic001G043800 Sobic010G277100 Sobic010G277100 Sobic001G053000--Sobic010G277100 Sobic002G343400 Sobic002G343400 Sobic001G053000--Sobic002G343400 Sobic001G053000--Sobic003G314500 Sobic007G062500 Sobic007G062500 Sobic001G053000--Sobic007G062500 Sobic008G144800 Sobic008G144800 Sobic001G053000--Sobic008G144800 Sobic002G281800 Sobic002G281800 Sobic001G053000--Sobic002G281800 Sobic001G417900 Sobic001G417900 Sobic001G053000--Sobic001G417900 Sobic010G140600 Sobic010G140600 Sobic001G053000--Sobic010G140600 Sobic010G265800--Sobic006G004600 Sobic003G413500 Sobic003G413500 Sobic010G265800--Sobic003G413500 Sobic010G265800--Sobic003G314500 Sobic003G308700 Sobic003G308700 Sobic010G265800--Sobic003G308700 Sobic009G148900 Sobic009G148900 Sobic010G265800--Sobic009G148900 Sobic001G387600 Sobic001G387600 Sobic010G265800--Sobic001G387600 Sobic009G057700 Sobic009G057700 Sobic010G265800--Sobic009G057700 Sobic010G265800--Sobic001G427500 Sobic010G245100 Sobic010G245100 Sobic010G265800--Sobic010G245100 Sobic006G004600--Sobic001G427500 Sobic006G004600--Sobic010G265800 Sobic007G007000 Sobic007G007000 Sobic006G004600--Sobic007G007000 Sobic002G251700 Sobic002G251700 Sobic006G004600--Sobic002G251700 Sobic006G004600--Sobic003G314500 Sobic006G269000 Sobic006G269000 Sobic006G004600--Sobic006G269000 Sobic001G004700 Sobic001G004700 Sobic006G004600--Sobic001G004700 Sobic006G004600--Sobic001G387600 Sobic006G004600--Sobic004G210900 Sobic006G263000 Sobic006G263000 Sobic002G125900--Sobic006G263000 Sobic007G120401 Sobic007G120401 Sobic002G125900--Sobic007G120401 Sobic001G351400 Sobic001G351400 Sobic002G125900--Sobic001G351400 Sobic002G404200 Sobic002G404200 Sobic002G125900--Sobic002G404200 Sobic002G040800 Sobic002G040800 Sobic002G125900--Sobic002G040800 Sobic003G222300 Sobic003G222300 Sobic002G125900--Sobic003G222300 Sobic002G125900--Sobic008G146900 Sobic002G125900--Sobic004G210900 Sobic002G125900--Sobic003G314500 Sobic010G184600 Sobic010G184600 Sobic008G146900--Sobic010G184600 Sobic002G276100 Sobic002G276100 Sobic008G146900--Sobic002G276100 Sobic001G159400 Sobic001G159400 Sobic008G146900--Sobic001G159400 Sobic010G196500 Sobic010G196500 Sobic008G146900--Sobic010G196500 Sobic004G181700 Sobic004G181700 Sobic008G146900--Sobic004G181700 Sobic008G146900--Sobic008G144800 Sobic004G189900 Sobic004G189900 Sobic008G146900--Sobic004G189900 Sobic002G193100 Sobic002G193100 Sobic008G146900--Sobic002G193100 Sobic003G014300 Sobic003G014300 Sobic008G146900--Sobic003G014300 Sobic003G125400 Sobic003G125400 Sobic005G032300--Sobic003G125400 Sobic005G032300--Sobic008G146900 Sobic005G032300--Sobic003G314500 Sobic005G032300--Sobic010G184600 Sobic005G032300--Sobic008G144800 Sobic008G004700 Sobic008G004700 Sobic005G032300--Sobic008G004700 Sobic003G404200 Sobic003G404200 Sobic005G032300--Sobic003G404200 Sobic003G410900 Sobic003G410900 Sobic005G032300--Sobic003G410900 Sobic006G258700 Sobic006G258700 Sobic005G032300--Sobic006G258700 Sobic002G339500 Sobic002G339500 Sobic001G427500--Sobic002G339500 Sobic002G193400 Sobic002G193400 Sobic001G427500--Sobic002G193400 Sobic004G227300 Sobic004G227300 Sobic001G427500--Sobic004G227300 Sobic001G427500--Sobic006G004600 Sobic001G427500--Sobic007G062500 Sobic001G427500--Sobic001G417900 Sobic009G017400 Sobic009G017400 Sobic001G427500--Sobic009G017400 Sobic001G261597 Sobic001G261597 Sobic001G427500--Sobic001G261597 Sobic001G022600 Sobic001G022600 Sobic001G427500--Sobic001G022600 Sobic004G183800 Sobic004G183800 Sobic004G210900--Sobic004G183800 Sobic005G175500 Sobic005G175500 Sobic004G210900--Sobic005G175500 Sobic010G000600 Sobic010G000600 Sobic004G210900--Sobic010G000600 Sobic006G060601 Sobic006G060601 Sobic004G210900--Sobic006G060601 Sobic010G030300 Sobic010G030300 Sobic004G210900--Sobic010G030300 Sobic004G210900--Sobic008G146900 Sobic009G213800 Sobic009G213800 Sobic004G210900--Sobic009G213800 Sobic004G210900--Sobic004G181700 Sobic004G210900--Sobic003G014300 Sobic002G048800 Sobic002G048800 Sobic003G206800--Sobic002G048800 Sobic001G320200 Sobic001G320200 Sobic003G206800--Sobic001G320200 Sobic001G340700 Sobic001G340700 Sobic003G206800--Sobic001G340700 Sobic003G206800--Sobic003G314500 Sobic002G130700 Sobic002G130700 Sobic003G206800--Sobic002G130700 Sobic008G001400 Sobic008G001400 Sobic003G206800--Sobic008G001400 Sobic002G073900 Sobic002G073900 Sobic003G206800--Sobic002G073900 Sobic008G142600 Sobic008G142600 Sobic003G206800--Sobic008G142600 Sobic001G427200 Sobic001G427200 Sobic003G206800--Sobic001G427200
Octagon: transcription factors


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