Gene annotation
Transcriptome id Sobic.003G261900.1,Sobic.003G261900.2
Synonym Sb03g031590
Functional annotation expressed protein
UniProt C5XGV1 , A0A1W0VYZ1
Pfam PF07797
Panther DB PTHR33130 PTHR33130:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G25370 : Protein of unknown function (DUF1639)
RAP-DB (Rice) LOC_Os01g49410.1 : expressed protein
MaizeGDB (Corn) Zm00025a027982
Brachypodium KQK09249
Barley HORVU3Hr1G064040.1 , HORVU3Hr1G064040.4 , HORVU3Hr1G064040.3 , HORVU3Hr1G064040.2
Wheat -
Populus -


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cDNA sequences
Sobic.003G261900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G359900 C2 domain containing protein, expressed -
2 Sobic.006G269000 protein kinase, putative, expressed -
3 Sobic.002G137300 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed -
4 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
5 Sobic.001G314900 homeobox domain containing protein, expressed -
6 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
7 Sobic.006G131800 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
8 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.008G142600 amino acid permease family protein, putative, expressed -
10 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
11 Sobic.003G314500 expressed protein -
12 Sobic.002G257100 regulatory protein, putative, expressed -
13 Sobic.005G045200 homeobox domain containing protein, expressed -
14 Sobic.004G214100 "BC14(Ortholog in rice:Zhang et al., 2011)"(PubMedID : 31659885)@transporter family protein, putative, expressed K15281: solute carrier family 35
15 Sobic.002G362100 expressed protein -
16 Sobic.005G072200 lipase, putative, expressed -
17 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
18 Sobic.009G141400 transcriptional regulator, putative, expressed -
19 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
20 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -


Gene co-expression network
sample Sobic003G261900 Sobic003G261900 Sobic003G359900 Sobic003G359900 Sobic003G261900--Sobic003G359900 Sobic006G269000 Sobic006G269000 Sobic003G261900--Sobic006G269000 Sobic002G137300 Sobic002G137300 Sobic003G261900--Sobic002G137300 Sobic001G022600 Sobic001G022600 Sobic003G261900--Sobic001G022600 Sobic001G314900 Sobic001G314900 Sobic003G261900--Sobic001G314900 Sobic010G207500 Sobic010G207500 Sobic003G261900--Sobic010G207500 Sobic006G131800 Sobic006G131800 Sobic003G261900--Sobic006G131800 Sobic001G526000 Sobic001G526000 Sobic003G261900--Sobic001G526000 Sobic008G142600 Sobic008G142600 Sobic003G261900--Sobic008G142600 Sobic005G072200 Sobic005G072200 Sobic003G359900--Sobic005G072200 Sobic009G190800 Sobic009G190800 Sobic003G359900--Sobic009G190800 Sobic004G227300 Sobic004G227300 Sobic003G359900--Sobic004G227300 Sobic001G261597 Sobic001G261597 Sobic003G359900--Sobic001G261597 Sobic009G205600 Sobic009G205600 Sobic003G359900--Sobic009G205600 Sobic004G214100 Sobic004G214100 Sobic003G359900--Sobic004G214100 Sobic003G359900--Sobic003G261900 Sobic006G065900 Sobic006G065900 Sobic003G359900--Sobic006G065900 Sobic002G271600 Sobic002G271600 Sobic003G359900--Sobic002G271600 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic006G269000--Sobic004G214100 Sobic001G072800 Sobic001G072800 Sobic006G269000--Sobic001G072800 Sobic006G269000--Sobic003G261900 Sobic007G168200 Sobic007G168200 Sobic006G269000--Sobic007G168200 Sobic002G242200 Sobic002G242200 Sobic006G269000--Sobic002G242200 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic001G029200 Sobic001G029200 Sobic002G137300--Sobic001G029200 Sobic010G035500 Sobic010G035500 Sobic002G137300--Sobic010G035500 Sobic003G103200 Sobic003G103200 Sobic002G137300--Sobic003G103200 Sobic009G141400 Sobic009G141400 Sobic002G137300--Sobic009G141400 Sobic003G306700 Sobic003G306700 Sobic002G137300--Sobic003G306700 Sobic008G081300 Sobic008G081300 Sobic002G137300--Sobic008G081300 Sobic006G201100 Sobic006G201100 Sobic002G137300--Sobic006G201100 Sobic002G137300--Sobic006G269000 Sobic004G163200 Sobic004G163200 Sobic002G137300--Sobic004G163200 Sobic001G022600--Sobic009G190800 Sobic001G022600--Sobic004G214100 Sobic002G193400 Sobic002G193400 Sobic001G022600--Sobic002G193400 Sobic001G022600--Sobic008G142600 Sobic002G117200 Sobic002G117200 Sobic001G022600--Sobic002G117200 Sobic001G427500 Sobic001G427500 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic001G022600--Sobic003G359900 Sobic001G404500 Sobic001G404500 Sobic001G314900--Sobic001G404500 Sobic004G224500 Sobic004G224500 Sobic001G314900--Sobic004G224500 Sobic006G258700 Sobic006G258700 Sobic001G314900--Sobic006G258700 Sobic001G525900 Sobic001G525900 Sobic001G314900--Sobic001G525900 Sobic010G269400 Sobic010G269400 Sobic001G314900--Sobic010G269400 Sobic001G314900--Sobic006G131800 Sobic010G193000 Sobic010G193000 Sobic001G314900--Sobic010G193000 Sobic002G257100 Sobic002G257100 Sobic001G314900--Sobic002G257100 Sobic004G201700 Sobic004G201700 Sobic001G314900--Sobic004G201700 Sobic002G025700 Sobic002G025700 Sobic010G207500--Sobic002G025700 Sobic010G207500--Sobic006G201100 Sobic004G300000 Sobic004G300000 Sobic010G207500--Sobic004G300000 Sobic002G362100 Sobic002G362100 Sobic010G207500--Sobic002G362100 Sobic002G046900 Sobic002G046900 Sobic010G207500--Sobic002G046900 Sobic010G207500--Sobic010G035500 Sobic004G164200 Sobic004G164200 Sobic010G207500--Sobic004G164200 Sobic010G207500--Sobic009G141400 Sobic001G351400 Sobic001G351400 Sobic010G207500--Sobic001G351400 Sobic002G281000 Sobic002G281000 Sobic006G131800--Sobic002G281000 Sobic006G131800--Sobic001G404500 Sobic003G291400 Sobic003G291400 Sobic006G131800--Sobic003G291400 Sobic006G131800--Sobic001G314900 Sobic008G063100 Sobic008G063100 Sobic006G131800--Sobic008G063100 Sobic010G089200 Sobic010G089200 Sobic006G131800--Sobic010G089200 Sobic006G131800--Sobic001G525900 Sobic006G131800--Sobic004G224500 Sobic004G254000 Sobic004G254000 Sobic006G131800--Sobic004G254000 Sobic006G167800 Sobic006G167800 Sobic001G526000--Sobic006G167800 Sobic003G296300 Sobic003G296300 Sobic001G526000--Sobic003G296300 Sobic001G088300 Sobic001G088300 Sobic001G526000--Sobic001G088300 Sobic001G195100 Sobic001G195100 Sobic001G526000--Sobic001G195100 Sobic009G100500 Sobic009G100500 Sobic001G526000--Sobic009G100500 Sobic001G314800 Sobic001G314800 Sobic001G526000--Sobic001G314800 Sobic006G259000 Sobic006G259000 Sobic001G526000--Sobic006G259000 Sobic007G090300 Sobic007G090300 Sobic001G526000--Sobic007G090300 Sobic004G110400 Sobic004G110400 Sobic001G526000--Sobic004G110400 Sobic008G142600--Sobic001G427700 Sobic008G142600--Sobic002G271600 Sobic003G402200 Sobic003G402200 Sobic008G142600--Sobic003G402200 Sobic001G321600 Sobic001G321600 Sobic008G142600--Sobic001G321600 Sobic008G142600--Sobic001G022600 Sobic001G416300 Sobic001G416300 Sobic008G142600--Sobic001G416300 Sobic008G111300 Sobic008G111300 Sobic008G142600--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic008G142600--Sobic002G366100 Sobic008G142600--Sobic009G190800
Octagon: transcription factors


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