Gene annotation
Transcriptome id Sobic.004G214100.1
Synonym Sb04g025940
Functional annotation "BC14(Ortholog in rice:Zhang et al., 2011)" (PubMedID : 31659885)
transporter family protein, putative, expressed
UniProt C5XXM5
Pfam PF03151
Panther DB PTHR11132 PTHR11132:SF51
NCBI CDD KOG1444; Nucleotide-sugar transporter VRG4/SQV-7
KEGG Orthology K15281; solute carrier family 35
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32272 : Nucleotide/sugar transporter family protein
RAP-DB (Rice) LOC_Os02g40030.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a031959 , Zm00025a021177
Brachypodium PNT69055 , KQK00328
Barley HORVU3Hr1G042320.1 , HORVU6Hr1G056950.9 , HORVU6Hr1G056950.8 , HORVU6Hr1G056950.1 , HORVU6Hr1G056950.3 , HORVU6Hr1G056950.2 , HORVU6Hr1G056950.5 , HORVU6Hr1G056950.4 , HORVU6Hr1G056950.7 , HORVU6Hr1G056950.6 , HORVU6Hr1G056950.11 , HORVU6Hr1G056950.10
Wheat TraesCS6A02G229900 , TraesCS6A02G229900 , TraesCS6D02G205100 , TraesCS6B02G251900 , TraesCS6B02G251900 , TraesCS6D02G205100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
2 Sobic.004G227300 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
3 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
4 Sobic.001G261597 - K07904: Ras-related protein Rab-11A
5 Sobic.003G359900 C2 domain containing protein, expressed -
6 Sobic.006G269000 protein kinase, putative, expressed -
7 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
8 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
9 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
10 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.003G103200 pex14, putative, expressed K13343: peroxin-14
13 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
14 Sobic.003G127300 expressed protein -
15 Sobic.002G430800 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
16 Sobic.003G261900 expressed protein -
17 Sobic.006G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBT6 - F-box and tubby domain containing protein, expressed -
18 Sobic.002G125900 ORM1, putative, expressed -
19 Sobic.008G142600 amino acid permease family protein, putative, expressed -
20 Sobic.004G174100 expressed protein -


Gene co-expression network
sample Sobic004G214100 Sobic004G214100 Sobic001G022600 Sobic001G022600 Sobic004G214100--Sobic001G022600 Sobic004G227300 Sobic004G227300 Sobic004G214100--Sobic004G227300 Sobic009G190800 Sobic009G190800 Sobic004G214100--Sobic009G190800 Sobic001G261597 Sobic001G261597 Sobic004G214100--Sobic001G261597 Sobic003G359900 Sobic003G359900 Sobic004G214100--Sobic003G359900 Sobic006G269000 Sobic006G269000 Sobic004G214100--Sobic006G269000 Sobic007G168200 Sobic007G168200 Sobic004G214100--Sobic007G168200 Sobic001G427500 Sobic001G427500 Sobic004G214100--Sobic001G427500 Sobic010G009400 Sobic010G009400 Sobic004G214100--Sobic010G009400 Sobic001G022600--Sobic009G190800 Sobic001G022600--Sobic004G214100 Sobic002G193400 Sobic002G193400 Sobic001G022600--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic001G022600--Sobic008G142600 Sobic002G117200 Sobic002G117200 Sobic001G022600--Sobic002G117200 Sobic001G022600--Sobic001G427500 Sobic004G174100 Sobic004G174100 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic001G022600--Sobic003G359900 Sobic004G227300--Sobic001G427500 Sobic004G227300--Sobic001G261597 Sobic006G171700 Sobic006G171700 Sobic004G227300--Sobic006G171700 Sobic004G227300--Sobic003G359900 Sobic003G299000 Sobic003G299000 Sobic004G227300--Sobic003G299000 Sobic004G227300--Sobic004G214100 Sobic002G259400 Sobic002G259400 Sobic004G227300--Sobic002G259400 Sobic007G062500 Sobic007G062500 Sobic004G227300--Sobic007G062500 Sobic006G119800 Sobic006G119800 Sobic004G227300--Sobic006G119800 Sobic001G341800 Sobic001G341800 Sobic009G190800--Sobic001G341800 Sobic009G190800--Sobic001G022600 Sobic009G190800--Sobic003G359900 Sobic003G103200 Sobic003G103200 Sobic009G190800--Sobic003G103200 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic001G416300 Sobic001G416300 Sobic009G190800--Sobic001G416300 Sobic009G190800--Sobic007G168200 Sobic001G261597--Sobic004G227300 Sobic003G000150 Sobic003G000150 Sobic001G261597--Sobic003G000150 Sobic001G261597--Sobic004G214100 Sobic002G073900 Sobic002G073900 Sobic001G261597--Sobic002G073900 Sobic001G261597--Sobic003G359900 Sobic001G261597--Sobic001G427500 Sobic001G261597--Sobic005G072200 Sobic002G040800 Sobic002G040800 Sobic001G261597--Sobic002G040800 Sobic001G261597--Sobic009G190800 Sobic003G359900--Sobic005G072200 Sobic003G359900--Sobic009G190800 Sobic003G359900--Sobic004G227300 Sobic003G359900--Sobic001G261597 Sobic009G205600 Sobic009G205600 Sobic003G359900--Sobic009G205600 Sobic003G359900--Sobic004G214100 Sobic003G261900 Sobic003G261900 Sobic003G359900--Sobic003G261900 Sobic006G065900 Sobic006G065900 Sobic003G359900--Sobic006G065900 Sobic002G271600 Sobic002G271600 Sobic003G359900--Sobic002G271600 Sobic002G137300 Sobic002G137300 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic006G269000--Sobic004G214100 Sobic001G072800 Sobic001G072800 Sobic006G269000--Sobic001G072800 Sobic006G269000--Sobic003G261900 Sobic006G269000--Sobic007G168200 Sobic002G242200 Sobic002G242200 Sobic006G269000--Sobic002G242200 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic007G168200--Sobic009G190800 Sobic001G039800 Sobic001G039800 Sobic007G168200--Sobic001G039800 Sobic001G294200 Sobic001G294200 Sobic007G168200--Sobic001G294200 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic007G168200--Sobic001G341800 Sobic007G168200--Sobic004G214100 Sobic007G168200--Sobic003G103200 Sobic002G339500 Sobic002G339500 Sobic001G427500--Sobic002G339500 Sobic001G427500--Sobic002G193400 Sobic001G427500--Sobic004G227300 Sobic001G427500--Sobic006G004600 Sobic001G427500--Sobic007G062500 Sobic001G427500--Sobic001G417900 Sobic009G017400 Sobic009G017400 Sobic001G427500--Sobic009G017400 Sobic001G427500--Sobic001G261597 Sobic001G427500--Sobic001G022600 Sobic002G251700 Sobic002G251700 Sobic010G009400--Sobic002G251700 Sobic005G229400 Sobic005G229400 Sobic010G009400--Sobic005G229400 Sobic002G301800 Sobic002G301800 Sobic010G009400--Sobic002G301800 Sobic001G162100 Sobic001G162100 Sobic010G009400--Sobic001G162100 Sobic006G225600 Sobic006G225600 Sobic010G009400--Sobic006G225600 Sobic001G387600 Sobic001G387600 Sobic010G009400--Sobic001G387600 Sobic003G413500 Sobic003G413500 Sobic010G009400--Sobic003G413500 Sobic010G009400--Sobic004G227300 Sobic010G009400--Sobic006G119800
Octagon: transcription factors


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