Gene annotation
Transcriptome id Sobic.004G174100.1
Synonym Sb04g022450
Functional annotation expressed protein
UniProt A0A194YQ79
Pfam PF11961 PF05003
Panther DB PTHR31730 PTHR31730:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34320 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os01g65330.1 : expressed protein
MaizeGDB (Corn) Zm00025a020625
Brachypodium PNT68817 , PNT68816 , PNT68818 , KQJ99848
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G174100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G427200 josephin, putative, expressed K15235: josephin
2 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
3 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
4 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
5 Sobic.001G022600 glycine-rich RNA-binding protein 7, putative, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
6 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
7 Sobic.008G142600 amino acid permease family protein, putative, expressed -
8 Sobic.004G293000 MSP domain containing protein, expressed -
9 Sobic.004G253900 BSD domain-containing protein, putative, expressed -
10 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
11 Sobic.009G034800 WRKY5, expressed -
12 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
13 Sobic.003G206800 DUF538 domain containing protein, putative, expressed -
14 Sobic.007G073700 nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
15 Sobic.004G255200 CSLE2 - cellulose synthase-like family E, expressed -
16 Sobic.004G175200 - -
17 Sobic.004G214100 "BC14(Ortholog in rice:Zhang et al., 2011)"(PubMedID : 31659885)@transporter family protein, putative, expressed K15281: solute carrier family 35
18 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
19 Sobic.008G001400 expressed protein -
20 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic004G174100 Sobic004G174100 Sobic001G427200 Sobic001G427200 Sobic004G174100--Sobic001G427200 Sobic006G242000 Sobic006G242000 Sobic004G174100--Sobic006G242000 Sobic002G130700 Sobic002G130700 Sobic004G174100--Sobic002G130700 Sobic005G064800 Sobic005G064800 Sobic004G174100--Sobic005G064800 Sobic001G022600 Sobic001G022600 Sobic004G174100--Sobic001G022600 Sobic002G193400 Sobic002G193400 Sobic004G174100--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic004G174100--Sobic008G142600 Sobic004G293000 Sobic004G293000 Sobic004G174100--Sobic004G293000 Sobic004G253900 Sobic004G253900 Sobic004G174100--Sobic004G253900 Sobic003G436300 Sobic003G436300 Sobic001G427200--Sobic003G436300 Sobic003G217400 Sobic003G217400 Sobic001G427200--Sobic003G217400 Sobic001G427200--Sobic004G174100 Sobic003G077900 Sobic003G077900 Sobic001G427200--Sobic003G077900 Sobic002G251700 Sobic002G251700 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic005G044800 Sobic005G044800 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000 Sobic003G097100 Sobic003G097100 Sobic006G242000--Sobic003G097100 Sobic006G028100 Sobic006G028100 Sobic006G242000--Sobic006G028100 Sobic002G217200 Sobic002G217200 Sobic006G242000--Sobic002G217200 Sobic006G242000--Sobic004G174100 Sobic007G135000 Sobic007G135000 Sobic006G242000--Sobic007G135000 Sobic006G242000--Sobic002G130700 Sobic003G022600 Sobic003G022600 Sobic006G242000--Sobic003G022600 Sobic006G242000--Sobic005G064800 Sobic001G320200 Sobic001G320200 Sobic006G242000--Sobic001G320200 Sobic009G034800 Sobic009G034800 Sobic002G130700--Sobic009G034800 Sobic004G275200 Sobic004G275200 Sobic002G130700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic002G130700--Sobic005G129400 Sobic002G130700--Sobic004G174100 Sobic002G130700--Sobic006G242000 Sobic002G027700 Sobic002G027700 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic004G202700 Sobic004G202700 Sobic005G064800--Sobic004G202700 Sobic007G073700 Sobic007G073700 Sobic005G064800--Sobic007G073700 Sobic007G029100 Sobic007G029100 Sobic005G064800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic005G064800--Sobic009G190800 Sobic005G064800--Sobic004G174100 Sobic004G142800 Sobic004G142800 Sobic005G064800--Sobic004G142800 Sobic001G416300 Sobic001G416300 Sobic005G064800--Sobic001G416300 Sobic005G064800--Sobic006G242000 Sobic002G339500 Sobic002G339500 Sobic005G064800--Sobic002G339500 Sobic001G022600--Sobic009G190800 Sobic004G214100 Sobic004G214100 Sobic001G022600--Sobic004G214100 Sobic001G022600--Sobic002G193400 Sobic001G022600--Sobic008G142600 Sobic002G117200 Sobic002G117200 Sobic001G022600--Sobic002G117200 Sobic001G427500 Sobic001G427500 Sobic001G022600--Sobic001G427500 Sobic001G022600--Sobic004G174100 Sobic001G427700 Sobic001G427700 Sobic001G022600--Sobic001G427700 Sobic003G359900 Sobic003G359900 Sobic001G022600--Sobic003G359900 Sobic002G193400--Sobic001G427500 Sobic002G193400--Sobic001G022600 Sobic002G193400--Sobic002G339500 Sobic003G402200 Sobic003G402200 Sobic002G193400--Sobic003G402200 Sobic006G127400 Sobic006G127400 Sobic002G193400--Sobic006G127400 Sobic002G193400--Sobic009G190800 Sobic005G072200 Sobic005G072200 Sobic002G193400--Sobic005G072200 Sobic001G075000 Sobic001G075000 Sobic002G193400--Sobic001G075000 Sobic006G052200 Sobic006G052200 Sobic002G193400--Sobic006G052200 Sobic008G142600--Sobic001G427700 Sobic002G271600 Sobic002G271600 Sobic008G142600--Sobic002G271600 Sobic008G142600--Sobic003G402200 Sobic001G321600 Sobic001G321600 Sobic008G142600--Sobic001G321600 Sobic008G142600--Sobic001G022600 Sobic008G142600--Sobic001G416300 Sobic008G111300 Sobic008G111300 Sobic008G142600--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic008G142600--Sobic002G366100 Sobic008G142600--Sobic009G190800 Sobic004G293000--Sobic001G427200 Sobic004G293000--Sobic005G044800 Sobic004G293000--Sobic004G174100 Sobic006G239800 Sobic006G239800 Sobic004G293000--Sobic006G239800 Sobic004G293000--Sobic005G064800 Sobic003G376400 Sobic003G376400 Sobic004G293000--Sobic003G376400 Sobic006G222100 Sobic006G222100 Sobic004G293000--Sobic006G222100 Sobic009G099500 Sobic009G099500 Sobic004G293000--Sobic009G099500 Sobic002G187300 Sobic002G187300 Sobic004G293000--Sobic002G187300 Sobic007G132700 Sobic007G132700 Sobic004G253900--Sobic007G132700 Sobic009G174000 Sobic009G174000 Sobic004G253900--Sobic009G174000 Sobic004G253900--Sobic003G299000 Sobic002G131900 Sobic002G131900 Sobic004G253900--Sobic002G131900 Sobic002G301300 Sobic002G301300 Sobic004G253900--Sobic002G301300 Sobic004G253900--Sobic003G077900 Sobic009G219900 Sobic009G219900 Sobic004G253900--Sobic009G219900 Sobic007G013300 Sobic007G013300 Sobic004G253900--Sobic007G013300 Sobic010G118100 Sobic010G118100 Sobic004G253900--Sobic010G118100
Octagon: transcription factors


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