Gene annotation
Transcriptome id Sobic.004G255200.1
Synonym ATCSLE1, CSLE1, Sb04g029420
Functional annotation CSLE2 - cellulose synthase-like family E, expressed
UniProt C5XZR1
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G55850 : cellulose synthase like E1
RAP-DB (Rice) LOC_Os02g49332.1 : CSLE2 - cellulose synthase-like family E, expressed
MaizeGDB (Corn) Zm00025a021874
Brachypodium KQK01524 , KQJ90650
Barley HORVU5Hr1G040860.1 , HORVU6Hr1G072070.10 , HORVU3Hr1G090600.1 , HORVU5Hr1G071140.6 , HORVU5Hr1G071140.7 , HORVU5Hr1G071140.4 , HORVU5Hr1G071140.5 , HORVU5Hr1G071140.2 , HORVU5Hr1G071140.3 , HORVU5Hr1G071140.1 , HORVU6Hr1G072070.4 , HORVU6Hr1G072070.5 , HORVU6Hr1G072070.6 , HORVU6Hr1G072070.7 , HORVU6Hr1G072070.1 , HORVU6Hr1G072070.2 , HORVU6Hr1G072070.3 , HORVU6Hr1G072070.8 , HORVU3Hr1G054440.1 , HORVU6Hr1G050550.1
Wheat TraesCS5B02G252000 , TraesCS5D02G260900 , TraesCS5D02G261000 , TraesCS6D02G111900 , TraesCS6D02G267600 , TraesCS6A02G286900 , TraesCS6A02G286900 , TraesCS5B02G252100 , TraesCS6B02G316000 , TraesCS5A02G253200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G210600 GTPase-activating protein, putative, expressed -
2 Sobic.001G427200 josephin, putative, expressed K15235: josephin
3 Sobic.005G086100 glutathione S-transferase, N-terminal domain containing protein, expressed K01800: maiA, maleylacetoacetate isomerase
4 Sobic.004G174100 expressed protein -
5 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
6 Sobic.004G067200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.003G333501 - -
8 Sobic.009G099500 expressed protein -
9 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
10 Sobic.006G242000 oryzain beta chain precursor, putative, expressed -
11 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
12 Sobic.006G222100 dehydrogenase, putative, expressed -
13 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
14 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
15 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
16 Sobic.002G113100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@membrane associated DUF588 domain containing protein, putative, expressed -
17 Sobic.006G239800 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
18 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
19 Sobic.003G440900 Invertase genes(PubMedID : 24456189)@"Beta-fructofuranosidase, cell wall Invertase 4 (Os)"(PubMedID : 27208977)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
20 Sobic.005G103700 - -


Gene co-expression network
sample Sobic004G255200 Sobic004G255200 Sobic009G210600 Sobic009G210600 Sobic004G255200--Sobic009G210600 Sobic001G427200 Sobic001G427200 Sobic004G255200--Sobic001G427200 Sobic005G086100 Sobic005G086100 Sobic004G255200--Sobic005G086100 Sobic004G174100 Sobic004G174100 Sobic004G255200--Sobic004G174100 Sobic002G087800 Sobic002G087800 Sobic004G255200--Sobic002G087800 Sobic004G067200 Sobic004G067200 Sobic004G255200--Sobic004G067200 Sobic003G333501 Sobic003G333501 Sobic004G255200--Sobic003G333501 Sobic009G099500 Sobic009G099500 Sobic004G255200--Sobic009G099500 Sobic004G225100 Sobic004G225100 Sobic004G255200--Sobic004G225100 Sobic009G210600--Sobic004G255200 Sobic010G210200 Sobic010G210200 Sobic009G210600--Sobic010G210200 Sobic009G210600--Sobic005G086100 Sobic009G210600--Sobic002G087800 Sobic009G167700 Sobic009G167700 Sobic009G210600--Sobic009G167700 Sobic003G354400 Sobic003G354400 Sobic009G210600--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G210600--Sobic001G334600 Sobic009G210600--Sobic004G225100 Sobic004G345800 Sobic004G345800 Sobic009G210600--Sobic004G345800 Sobic003G436300 Sobic003G436300 Sobic001G427200--Sobic003G436300 Sobic003G217400 Sobic003G217400 Sobic001G427200--Sobic003G217400 Sobic001G427200--Sobic004G174100 Sobic003G077900 Sobic003G077900 Sobic001G427200--Sobic003G077900 Sobic002G251700 Sobic002G251700 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic005G044800 Sobic005G044800 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000 Sobic002G113100 Sobic002G113100 Sobic005G086100--Sobic002G113100 Sobic007G068900 Sobic007G068900 Sobic005G086100--Sobic007G068900 Sobic005G086100--Sobic009G210600 Sobic007G007000 Sobic007G007000 Sobic005G086100--Sobic007G007000 Sobic005G086100--Sobic003G354400 Sobic005G086100--Sobic005G044800 Sobic006G049300 Sobic006G049300 Sobic005G086100--Sobic006G049300 Sobic001G508100 Sobic001G508100 Sobic005G086100--Sobic001G508100 Sobic009G217100 Sobic009G217100 Sobic005G086100--Sobic009G217100 Sobic004G174100--Sobic001G427200 Sobic006G242000 Sobic006G242000 Sobic004G174100--Sobic006G242000 Sobic002G130700 Sobic002G130700 Sobic004G174100--Sobic002G130700 Sobic005G064800 Sobic005G064800 Sobic004G174100--Sobic005G064800 Sobic001G022600 Sobic001G022600 Sobic004G174100--Sobic001G022600 Sobic002G193400 Sobic002G193400 Sobic004G174100--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic004G174100--Sobic008G142600 Sobic004G293000 Sobic004G293000 Sobic004G174100--Sobic004G293000 Sobic004G253900 Sobic004G253900 Sobic004G174100--Sobic004G253900 Sobic005G024900 Sobic005G024900 Sobic002G087800--Sobic005G024900 Sobic009G057300 Sobic009G057300 Sobic002G087800--Sobic009G057300 Sobic003G388251 Sobic003G388251 Sobic002G087800--Sobic003G388251 Sobic009G226600 Sobic009G226600 Sobic002G087800--Sobic009G226600 Sobic003G241500 Sobic003G241500 Sobic002G087800--Sobic003G241500 Sobic001G474500 Sobic001G474500 Sobic002G087800--Sobic001G474500 Sobic003G061800 Sobic003G061800 Sobic002G087800--Sobic003G061800 Sobic001G305800 Sobic001G305800 Sobic002G087800--Sobic001G305800 Sobic005G178100 Sobic005G178100 Sobic002G087800--Sobic005G178100 Sobic001G157200 Sobic001G157200 Sobic004G067200--Sobic001G157200 Sobic004G067200--Sobic003G333501 Sobic004G067200--Sobic009G099500 Sobic004G067200--Sobic002G130700 Sobic002G241400 Sobic002G241400 Sobic004G067200--Sobic002G241400 Sobic004G067200--Sobic009G210600 Sobic009G038401 Sobic009G038401 Sobic004G067200--Sobic009G038401 Sobic004G067200--Sobic001G427200 Sobic002G222800 Sobic002G222800 Sobic004G067200--Sobic002G222800 Sobic003G333400 Sobic003G333400 Sobic003G333501--Sobic003G333400 Sobic002G329100 Sobic002G329100 Sobic003G333501--Sobic002G329100 Sobic003G333501--Sobic004G067200 Sobic003G333501--Sobic009G210600 Sobic001G393800 Sobic001G393800 Sobic003G333501--Sobic001G393800 Sobic004G276100 Sobic004G276100 Sobic003G333501--Sobic004G276100 Sobic007G195100 Sobic007G195100 Sobic003G333501--Sobic007G195100 Sobic001G409200 Sobic001G409200 Sobic003G333501--Sobic001G409200 Sobic003G333501--Sobic009G038401 Sobic009G099500--Sobic001G393800 Sobic005G150800 Sobic005G150800 Sobic009G099500--Sobic005G150800 Sobic004G067100 Sobic004G067100 Sobic009G099500--Sobic004G067100 Sobic009G099500--Sobic003G077900 Sobic004G234900 Sobic004G234900 Sobic009G099500--Sobic004G234900 Sobic009G099500--Sobic001G427200 Sobic009G099500--Sobic007G007000 Sobic009G099500--Sobic002G251700 Sobic001G057800 Sobic001G057800 Sobic009G099500--Sobic001G057800 Sobic004G225200 Sobic004G225200 Sobic004G225100--Sobic004G225200 Sobic002G244100 Sobic002G244100 Sobic004G225100--Sobic002G244100 Sobic004G225100--Sobic001G334600 Sobic004G225100--Sobic009G167700 Sobic004G225100--Sobic003G388251 Sobic004G225100--Sobic005G178100 Sobic004G225100--Sobic003G354400 Sobic004G225100--Sobic001G305800 Sobic004G225100--Sobic002G087800
Octagon: transcription factors


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