Gene annotation
Transcriptome id Sobic.005G103700.1
Synonym
Functional annotation -
UniProt A0A1B6PRG4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
2 Sobic.009G034800 WRKY5, expressed -
3 Sobic.009G171600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY70, expressed -
4 Sobic.004G067200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.006G246300 protein kinase, putative, expressed -
7 Sobic.008G142100 No apical meristem protein, putative, expressed -
8 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -
9 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
10 Sobic.001G319200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
13 Sobic.010G102150 - -
14 Sobic.010G155300 VQ domain containing protein, putative, expressed -
15 Sobic.004G255200 CSLE2 - cellulose synthase-like family E, expressed -
16 Sobic.006G113000 Copper transport protein family("PubMedID : 26759170,PubMedID : 24597475")@expressed protein -
17 Sobic.002G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
18 Sobic.001G427200 josephin, putative, expressed K15235: josephin
19 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
20 Sobic.003G321300 disease resistance protein RPS2, putative, expressed K13459: disease resistance protein RPS2


Gene co-expression network
sample Sobic005G103700 Sobic005G103700 Sobic002G130700 Sobic002G130700 Sobic005G103700--Sobic002G130700 Sobic009G034800 Sobic009G034800 Sobic005G103700--Sobic009G034800 Sobic009G171600 Sobic009G171600 Sobic005G103700--Sobic009G171600 Sobic004G067200 Sobic004G067200 Sobic005G103700--Sobic004G067200 Sobic001G319100 Sobic001G319100 Sobic005G103700--Sobic001G319100 Sobic006G246300 Sobic006G246300 Sobic005G103700--Sobic006G246300 Sobic008G142100 Sobic008G142100 Sobic005G103700--Sobic008G142100 Sobic007G158500 Sobic007G158500 Sobic005G103700--Sobic007G158500 Sobic001G075000 Sobic001G075000 Sobic005G103700--Sobic001G075000 Sobic002G130700--Sobic009G034800 Sobic004G275200 Sobic004G275200 Sobic002G130700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic002G130700--Sobic005G129400 Sobic004G174100 Sobic004G174100 Sobic002G130700--Sobic004G174100 Sobic006G242000 Sobic006G242000 Sobic002G130700--Sobic006G242000 Sobic002G027700 Sobic002G027700 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic001G427200 Sobic001G427200 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic009G034800--Sobic002G130700 Sobic009G034800--Sobic002G027700 Sobic009G034800--Sobic004G174100 Sobic009G034800--Sobic007G158500 Sobic009G034800--Sobic005G103700 Sobic009G034800--Sobic001G319100 Sobic002G216500 Sobic002G216500 Sobic009G034800--Sobic002G216500 Sobic004G174000 Sobic004G174000 Sobic009G034800--Sobic004G174000 Sobic002G067300 Sobic002G067300 Sobic009G034800--Sobic002G067300 Sobic010G102150 Sobic010G102150 Sobic009G171600--Sobic010G102150 Sobic009G171600--Sobic007G158500 Sobic002G024000 Sobic002G024000 Sobic009G171600--Sobic002G024000 Sobic004G182300 Sobic004G182300 Sobic009G171600--Sobic004G182300 Sobic010G163000 Sobic010G163000 Sobic009G171600--Sobic010G163000 Sobic004G058000 Sobic004G058000 Sobic009G171600--Sobic004G058000 Sobic007G090300 Sobic007G090300 Sobic009G171600--Sobic007G090300 Sobic009G241700 Sobic009G241700 Sobic009G171600--Sobic009G241700 Sobic005G080200 Sobic005G080200 Sobic009G171600--Sobic005G080200 Sobic001G157200 Sobic001G157200 Sobic004G067200--Sobic001G157200 Sobic003G333501 Sobic003G333501 Sobic004G067200--Sobic003G333501 Sobic009G099500 Sobic009G099500 Sobic004G067200--Sobic009G099500 Sobic004G067200--Sobic002G130700 Sobic004G067200--Sobic002G241400 Sobic009G210600 Sobic009G210600 Sobic004G067200--Sobic009G210600 Sobic009G038401 Sobic009G038401 Sobic004G067200--Sobic009G038401 Sobic004G067200--Sobic001G427200 Sobic002G222800 Sobic002G222800 Sobic004G067200--Sobic002G222800 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic006G246200 Sobic006G246200 Sobic001G319100--Sobic006G246200 Sobic005G082700 Sobic005G082700 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G381300 Sobic001G381300 Sobic001G319100--Sobic001G381300 Sobic010G009400 Sobic010G009400 Sobic006G246300--Sobic010G009400 Sobic006G246300--Sobic001G319100 Sobic005G229400 Sobic005G229400 Sobic006G246300--Sobic005G229400 Sobic001G318900 Sobic001G318900 Sobic006G246300--Sobic001G318900 Sobic006G246300--Sobic002G130700 Sobic001G339600 Sobic001G339600 Sobic006G246300--Sobic001G339600 Sobic006G246300--Sobic008G142100 Sobic006G246300--Sobic009G099500 Sobic003G261900 Sobic003G261900 Sobic006G246300--Sobic003G261900 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic002G209100 Sobic002G209100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic004G195800 Sobic004G195800 Sobic008G142100--Sobic004G195800 Sobic002G257100 Sobic002G257100 Sobic008G142100--Sobic002G257100 Sobic008G142100--Sobic001G381300 Sobic008G142100--Sobic001G339600 Sobic003G339900 Sobic003G339900 Sobic008G142100--Sobic003G339900 Sobic007G158500--Sobic009G171600 Sobic010G018300 Sobic010G018300 Sobic007G158500--Sobic010G018300 Sobic002G386200 Sobic002G386200 Sobic007G158500--Sobic002G386200 Sobic001G331000 Sobic001G331000 Sobic007G158500--Sobic001G331000 Sobic001G319200 Sobic001G319200 Sobic007G158500--Sobic001G319200 Sobic007G158500--Sobic009G034800 Sobic004G167300 Sobic004G167300 Sobic007G158500--Sobic004G167300 Sobic001G146400 Sobic001G146400 Sobic007G158500--Sobic001G146400 Sobic007G158500--Sobic009G067400 Sobic001G075000--Sobic008G142100 Sobic001G093900 Sobic001G093900 Sobic001G075000--Sobic001G093900 Sobic002G376000 Sobic002G376000 Sobic001G075000--Sobic002G376000 Sobic003G296300 Sobic003G296300 Sobic001G075000--Sobic003G296300 Sobic001G075000--Sobic001G319100 Sobic001G024500 Sobic001G024500 Sobic001G075000--Sobic001G024500 Sobic002G193400 Sobic002G193400 Sobic001G075000--Sobic002G193400 Sobic006G167800 Sobic006G167800 Sobic001G075000--Sobic006G167800 Sobic001G075000--Sobic002G257100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.