Gene annotation
Transcriptome id Sobic.006G246300.5,Sobic.006G246300.4,Sobic.006G246300.2,Sobic.006G246300.3,Sobic.006G246300.1
Synonym SD2-5
Functional annotation protein kinase, putative, expressed
UniProt A0A1Z5RFC3 , A0A1B6PNR1
Pfam PF07714
Panther DB PTHR27009 PTHR27009:SF17
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G32300 : S-domain-2 5
RAP-DB (Rice) LOC_Os04g56110.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a009482 , Zm00025a009483 , Zm00025a009481 , Zm00025a054934 , Zm00025a057249 , Zm00025a057248
Brachypodium KQJ85080 , KQJ85076 , KQJ85078 , KQJ85079 , PNT62053
Barley HORVU2Hr1G111790.6 , HORVU2Hr1G111760.4 , HORVU2Hr1G111700.3 , HORVU2Hr1G111780.2 , HORVU2Hr1G111780.3 , HORVU2Hr1G111780.1 , HORVU2Hr1G111780.4 , HORVU2Hr1G111780.5 , HORVU2Hr1G111700.2 , HORVU2Hr1G111700.1 , HORVU2Hr1G111700.6 , HORVU2Hr1G111700.7 , HORVU2Hr1G111700.4 , HORVU2Hr1G111700.5 , HORVU2Hr1G111790.1 , HORVU2Hr1G111790.3 , HORVU2Hr1G111790.2 , HORVU2Hr1G111790.5 , HORVU2Hr1G111790.4 , HORVU2Hr1G111790.7 , HORVU2Hr1G111760.1 , HORVU2Hr1G111760.2 , HORVU2Hr1G111760.3
Wheat TraesCS2A02G503800 , TraesCS2B02G532100 , TraesCS2B02G532000 , TraesCS2B02G531800 , TraesCS2D02G504400 , TraesCS2A02G503700 , TraesCS2D02G504300
Populus -


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cDNA sequences
Sobic.006G246300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
2 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
4 Sobic.001G318900 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
6 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
7 Sobic.008G142100 No apical meristem protein, putative, expressed -
8 Sobic.009G099500 expressed protein -
9 Sobic.003G261900 expressed protein -
10 Sobic.005G103700 - -
11 Sobic.002G273700 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
12 Sobic.006G246200 protein kinase, putative, expressed -
13 Sobic.001G136300 nodulin family protein, putative, expressed -
14 Sobic.002G241400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
16 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -
17 Sobic.003G413500 expressed protein -
18 Sobic.007G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
19 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
20 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1


Gene co-expression network
sample Sobic006G246300 Sobic006G246300 Sobic010G009400 Sobic010G009400 Sobic006G246300--Sobic010G009400 Sobic001G319100 Sobic001G319100 Sobic006G246300--Sobic001G319100 Sobic005G229400 Sobic005G229400 Sobic006G246300--Sobic005G229400 Sobic001G318900 Sobic001G318900 Sobic006G246300--Sobic001G318900 Sobic002G130700 Sobic002G130700 Sobic006G246300--Sobic002G130700 Sobic001G339600 Sobic001G339600 Sobic006G246300--Sobic001G339600 Sobic008G142100 Sobic008G142100 Sobic006G246300--Sobic008G142100 Sobic009G099500 Sobic009G099500 Sobic006G246300--Sobic009G099500 Sobic003G261900 Sobic003G261900 Sobic006G246300--Sobic003G261900 Sobic002G251700 Sobic002G251700 Sobic010G009400--Sobic002G251700 Sobic010G009400--Sobic005G229400 Sobic002G301800 Sobic002G301800 Sobic010G009400--Sobic002G301800 Sobic001G162100 Sobic001G162100 Sobic010G009400--Sobic001G162100 Sobic006G225600 Sobic006G225600 Sobic010G009400--Sobic006G225600 Sobic001G387600 Sobic001G387600 Sobic010G009400--Sobic001G387600 Sobic003G413500 Sobic003G413500 Sobic010G009400--Sobic003G413500 Sobic004G227300 Sobic004G227300 Sobic010G009400--Sobic004G227300 Sobic006G119800 Sobic006G119800 Sobic010G009400--Sobic006G119800 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic006G246200 Sobic006G246200 Sobic001G319100--Sobic006G246200 Sobic005G082700 Sobic005G082700 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G381300 Sobic001G381300 Sobic001G319100--Sobic001G381300 Sobic005G229400--Sobic010G009400 Sobic005G229400--Sobic002G301800 Sobic001G285000 Sobic001G285000 Sobic005G229400--Sobic001G285000 Sobic001G045000 Sobic001G045000 Sobic005G229400--Sobic001G045000 Sobic009G156300 Sobic009G156300 Sobic005G229400--Sobic009G156300 Sobic005G229400--Sobic004G227300 Sobic001G288100 Sobic001G288100 Sobic005G229400--Sobic001G288100 Sobic009G100500 Sobic009G100500 Sobic005G229400--Sobic009G100500 Sobic005G229400--Sobic001G162100 Sobic003G376200 Sobic003G376200 Sobic001G318900--Sobic003G376200 Sobic003G276000 Sobic003G276000 Sobic001G318900--Sobic003G276000 Sobic001G146200 Sobic001G146200 Sobic001G318900--Sobic001G146200 Sobic002G273700 Sobic002G273700 Sobic001G318900--Sobic002G273700 Sobic003G363100 Sobic003G363100 Sobic001G318900--Sobic003G363100 Sobic001G454200 Sobic001G454200 Sobic001G318900--Sobic001G454200 Sobic001G318900--Sobic006G246300 Sobic010G018100 Sobic010G018100 Sobic001G318900--Sobic010G018100 Sobic005G217200 Sobic005G217200 Sobic001G318900--Sobic005G217200 Sobic009G034800 Sobic009G034800 Sobic002G130700--Sobic009G034800 Sobic004G275200 Sobic004G275200 Sobic002G130700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic002G130700--Sobic005G129400 Sobic004G174100 Sobic004G174100 Sobic002G130700--Sobic004G174100 Sobic006G242000 Sobic006G242000 Sobic002G130700--Sobic006G242000 Sobic002G027700 Sobic002G027700 Sobic002G130700--Sobic002G027700 Sobic009G245700 Sobic009G245700 Sobic002G130700--Sobic009G245700 Sobic001G427200 Sobic001G427200 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic004G092000 Sobic004G092000 Sobic001G339600--Sobic004G092000 Sobic003G138400 Sobic003G138400 Sobic001G339600--Sobic003G138400 Sobic010G214200 Sobic010G214200 Sobic001G339600--Sobic010G214200 Sobic003G339900 Sobic003G339900 Sobic001G339600--Sobic003G339900 Sobic001G339600--Sobic008G142100 Sobic002G216500 Sobic002G216500 Sobic001G339600--Sobic002G216500 Sobic004G220600 Sobic004G220600 Sobic001G339600--Sobic004G220600 Sobic001G387000 Sobic001G387000 Sobic001G339600--Sobic001G387000 Sobic001G339600--Sobic001G319100 Sobic001G075000 Sobic001G075000 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic002G209100 Sobic002G209100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic004G195800 Sobic004G195800 Sobic008G142100--Sobic004G195800 Sobic002G257100 Sobic002G257100 Sobic008G142100--Sobic002G257100 Sobic008G142100--Sobic001G381300 Sobic008G142100--Sobic001G339600 Sobic008G142100--Sobic003G339900 Sobic001G393800 Sobic001G393800 Sobic009G099500--Sobic001G393800 Sobic005G150800 Sobic005G150800 Sobic009G099500--Sobic005G150800 Sobic004G067100 Sobic004G067100 Sobic009G099500--Sobic004G067100 Sobic003G077900 Sobic003G077900 Sobic009G099500--Sobic003G077900 Sobic004G234900 Sobic004G234900 Sobic009G099500--Sobic004G234900 Sobic009G099500--Sobic001G427200 Sobic007G007000 Sobic007G007000 Sobic009G099500--Sobic007G007000 Sobic009G099500--Sobic002G251700 Sobic001G057800 Sobic001G057800 Sobic009G099500--Sobic001G057800 Sobic003G359900 Sobic003G359900 Sobic003G261900--Sobic003G359900 Sobic006G269000 Sobic006G269000 Sobic003G261900--Sobic006G269000 Sobic002G137300 Sobic002G137300 Sobic003G261900--Sobic002G137300 Sobic001G022600 Sobic001G022600 Sobic003G261900--Sobic001G022600 Sobic001G314900 Sobic001G314900 Sobic003G261900--Sobic001G314900 Sobic010G207500 Sobic010G207500 Sobic003G261900--Sobic010G207500 Sobic006G131800 Sobic006G131800 Sobic003G261900--Sobic006G131800 Sobic001G526000 Sobic001G526000 Sobic003G261900--Sobic001G526000 Sobic008G142600 Sobic008G142600 Sobic003G261900--Sobic008G142600
Octagon: transcription factors


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