Gene annotation
Transcriptome id Sobic.001G339600.2,Sobic.001G339600.1
Synonym Sb01g032670, ZIP11
Functional annotation metal cation transporter, putative, expressed
UniProt A0A1B6QML3 , A0A1B6QML5
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF23
NCBI CDD KOG1558; Fe2+/Zn2+ regulated transporter
KEGG Orthology K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G55910 : zinc transporter 11 precursor
RAP-DB (Rice) LOC_Os03g29850.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) Zm00025a002842
Brachypodium KQK02840 , KQK21313
Barley HORVU6Hr1G018070.8 , HORVU6Hr1G018070.9 , HORVU6Hr1G018070.1 , HORVU6Hr1G018070.2 , HORVU6Hr1G018070.3 , HORVU6Hr1G018070.4 , HORVU6Hr1G018070.5 , HORVU6Hr1G018070.6 , HORVU6Hr1G018070.7 , HORVU6Hr1G018070.12 , HORVU6Hr1G018070.13 , HORVU6Hr1G018070.10 , HORVU6Hr1G018070.11 , HORVU5Hr1G071590.4 , HORVU5Hr1G071590.6 , HORVU5Hr1G071590.1 , HORVU5Hr1G071590.3 , HORVU5Hr1G071590.2
Wheat TraesCS6A02G099800 , TraesCS6A02G099800 , TraesCS5A02G256100 , TraesCS6D02G082600 , TraesCS3B02G595100 , TraesCS6B02G128000 , TraesCS6B02G128000 , TraesCS3D02G532400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G092000 expressed protein -
2 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
3 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
4 Sobic.003G339900 expressed protein -
5 Sobic.008G142100 No apical meristem protein, putative, expressed -
6 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
7 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
8 Sobic.001G387000 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
9 Sobic.001G319100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.008G085350 - -
11 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
13 Sobic.002G209100 glutamate receptor, putative, expressed -
14 Sobic.003G376200 expressed protein -
15 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
16 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
17 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
18 Sobic.006G246200 protein kinase, putative, expressed -
19 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G273700 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G339600 Sobic001G339600 Sobic004G092000 Sobic004G092000 Sobic001G339600--Sobic004G092000 Sobic003G138400 Sobic003G138400 Sobic001G339600--Sobic003G138400 Sobic010G214200 Sobic010G214200 Sobic001G339600--Sobic010G214200 Sobic003G339900 Sobic003G339900 Sobic001G339600--Sobic003G339900 Sobic008G142100 Sobic008G142100 Sobic001G339600--Sobic008G142100 Sobic002G216500 Sobic002G216500 Sobic001G339600--Sobic002G216500 Sobic004G220600 Sobic004G220600 Sobic001G339600--Sobic004G220600 Sobic001G387000 Sobic001G387000 Sobic001G339600--Sobic001G387000 Sobic001G319100 Sobic001G319100 Sobic001G339600--Sobic001G319100 Sobic003G376200 Sobic003G376200 Sobic004G092000--Sobic003G376200 Sobic004G092000--Sobic003G339900 Sobic004G092000--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic010G273700 Sobic010G273700 Sobic003G138400--Sobic010G273700 Sobic003G138400--Sobic004G220600 Sobic004G006500 Sobic004G006500 Sobic003G138400--Sobic004G006500 Sobic003G138400--Sobic001G339600 Sobic003G138400--Sobic009G227800 Sobic004G169900 Sobic004G169900 Sobic003G138400--Sobic004G169900 Sobic003G138400--Sobic004G092000 Sobic003G138400--Sobic002G216500 Sobic009G010400 Sobic009G010400 Sobic003G138400--Sobic009G010400 Sobic006G045000 Sobic006G045000 Sobic010G214200--Sobic006G045000 Sobic004G209500 Sobic004G209500 Sobic010G214200--Sobic004G209500 Sobic004G217700 Sobic004G217700 Sobic010G214200--Sobic004G217700 Sobic001G056500 Sobic001G056500 Sobic010G214200--Sobic001G056500 Sobic010G214200--Sobic002G216500 Sobic004G195800 Sobic004G195800 Sobic010G214200--Sobic004G195800 Sobic002G423600 Sobic002G423600 Sobic010G214200--Sobic002G423600 Sobic003G310500 Sobic003G310500 Sobic010G214200--Sobic003G310500 SobicK044407 SobicK044407 Sobic010G214200--SobicK044407 Sobic005G119100 Sobic005G119100 Sobic003G339900--Sobic005G119100 Sobic003G339900--Sobic004G092000 Sobic007G025900 Sobic007G025900 Sobic003G339900--Sobic007G025900 Sobic002G257100 Sobic002G257100 Sobic003G339900--Sobic002G257100 Sobic003G339900--Sobic001G339600 Sobic003G339900--Sobic001G314300 Sobic003G339900--Sobic008G142100 Sobic005G072200 Sobic005G072200 Sobic003G339900--Sobic005G072200 Sobic003G339900--Sobic010G273700 Sobic001G075000 Sobic001G075000 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic002G209100 Sobic002G209100 Sobic008G142100--Sobic002G209100 Sobic004G258400 Sobic004G258400 Sobic008G142100--Sobic004G258400 Sobic008G142100--Sobic004G195800 Sobic008G142100--Sobic002G257100 Sobic001G381300 Sobic001G381300 Sobic008G142100--Sobic001G381300 Sobic008G142100--Sobic001G339600 Sobic008G142100--Sobic003G339900 Sobic002G216500--Sobic004G220600 Sobic002G216500--Sobic006G045000 Sobic005G218500 Sobic005G218500 Sobic002G216500--Sobic005G218500 Sobic002G216500--Sobic010G214200 Sobic002G216500--Sobic004G209500 Sobic006G014700 Sobic006G014700 Sobic002G216500--Sobic006G014700 Sobic003G378301 Sobic003G378301 Sobic002G216500--Sobic003G378301 Sobic002G216500--Sobic003G310500 Sobic002G216500--Sobic004G217700 Sobic004G220600--Sobic002G216500 Sobic006G168000 Sobic006G168000 Sobic004G220600--Sobic006G168000 Sobic004G220600--Sobic005G218500 Sobic004G220600--Sobic003G378301 Sobic004G220600--Sobic003G138400 Sobic004G220600--Sobic003G376200 Sobic008G181801 Sobic008G181801 Sobic004G220600--Sobic008G181801 Sobic009G241500 Sobic009G241500 Sobic004G220600--Sobic009G241500 Sobic008G075400 Sobic008G075400 Sobic004G220600--Sobic008G075400 Sobic001G387000--Sobic002G257100 Sobic001G145050 Sobic001G145050 Sobic001G387000--Sobic001G145050 Sobic001G387000--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic001G387000--Sobic002G041800 Sobic001G387000--Sobic001G339600 Sobic002G271600 Sobic002G271600 Sobic001G387000--Sobic002G271600 Sobic001G387000--Sobic004G258400 Sobic005G085500 Sobic005G085500 Sobic001G387000--Sobic005G085500 Sobic009G037200 Sobic009G037200 Sobic001G387000--Sobic009G037200 Sobic009G121600 Sobic009G121600 Sobic001G319100--Sobic009G121600 Sobic009G216050 Sobic009G216050 Sobic001G319100--Sobic009G216050 Sobic006G246200 Sobic006G246200 Sobic001G319100--Sobic006G246200 Sobic005G082700 Sobic005G082700 Sobic001G319100--Sobic005G082700 Sobic001G319100--Sobic008G142100 Sobic004G101000 Sobic004G101000 Sobic001G319100--Sobic004G101000 Sobic009G067400 Sobic009G067400 Sobic001G319100--Sobic009G067400 Sobic006G190000 Sobic006G190000 Sobic001G319100--Sobic006G190000 Sobic001G319100--Sobic001G381300
Octagon: transcription factors


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