Gene annotation
Transcriptome id Sobic.003G339900.1
Synonym Sb03g038390
Functional annotation expressed protein
UniProt C5XNC1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g60930.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G339900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G119100 OsFBX70 - F-box domain containing protein, expressed -
2 Sobic.004G092000 expressed protein -
3 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
4 Sobic.002G257100 regulatory protein, putative, expressed -
5 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
6 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
7 Sobic.008G142100 No apical meristem protein, putative, expressed -
8 Sobic.005G072200 lipase, putative, expressed -
9 Sobic.010G273700 no apical meristem protein, putative, expressed -
10 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
11 Sobic.003G376200 expressed protein -
12 Sobic.006G065900 expressed protein -
13 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
14 Sobic.003G375900 amino acid transporter, putative, expressed -
15 Sobic.003G403500 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
16 Sobic.007G129201 - -
17 Sobic.006G265000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
18 Sobic.002G201900 transporter family protein, putative, expressed -
19 Sobic.001G414000 TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
20 Sobic.001G075000 lectin-like receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic003G339900 Sobic003G339900 Sobic005G119100 Sobic005G119100 Sobic003G339900--Sobic005G119100 Sobic004G092000 Sobic004G092000 Sobic003G339900--Sobic004G092000 Sobic007G025900 Sobic007G025900 Sobic003G339900--Sobic007G025900 Sobic002G257100 Sobic002G257100 Sobic003G339900--Sobic002G257100 Sobic001G339600 Sobic001G339600 Sobic003G339900--Sobic001G339600 Sobic001G314300 Sobic001G314300 Sobic003G339900--Sobic001G314300 Sobic008G142100 Sobic008G142100 Sobic003G339900--Sobic008G142100 Sobic005G072200 Sobic005G072200 Sobic003G339900--Sobic005G072200 Sobic010G273700 Sobic010G273700 Sobic003G339900--Sobic010G273700 Sobic005G207000 Sobic005G207000 Sobic005G119100--Sobic005G207000 Sobic005G119100--Sobic003G339900 Sobic005G119100--Sobic007G025900 Sobic004G099700 Sobic004G099700 Sobic005G119100--Sobic004G099700 Sobic007G129201 Sobic007G129201 Sobic005G119100--Sobic007G129201 Sobic008G060300 Sobic008G060300 Sobic005G119100--Sobic008G060300 Sobic003G376200 Sobic003G376200 Sobic005G119100--Sobic003G376200 Sobic005G119100--Sobic004G092000 Sobic006G065900 Sobic006G065900 Sobic005G119100--Sobic006G065900 Sobic004G092000--Sobic003G376200 Sobic004G092000--Sobic003G339900 Sobic004G092000--Sobic001G339600 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic003G138400 Sobic003G138400 Sobic004G092000--Sobic003G138400 Sobic009G227800 Sobic009G227800 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic007G025900--Sobic004G099700 Sobic002G201900 Sobic002G201900 Sobic007G025900--Sobic002G201900 Sobic007G025900--Sobic006G065900 Sobic007G025900--Sobic010G273700 Sobic007G025900--Sobic005G119100 Sobic007G025900--Sobic008G060300 Sobic005G045200 Sobic005G045200 Sobic007G025900--Sobic005G045200 Sobic003G366100 Sobic003G366100 Sobic007G025900--Sobic003G366100 Sobic001G404500 Sobic001G404500 Sobic007G025900--Sobic001G404500 Sobic002G209100 Sobic002G209100 Sobic002G257100--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G257100--Sobic002G041800 Sobic001G321600 Sobic001G321600 Sobic002G257100--Sobic001G321600 Sobic010G089200 Sobic010G089200 Sobic002G257100--Sobic010G089200 Sobic004G258400 Sobic004G258400 Sobic002G257100--Sobic004G258400 Sobic001G520100 Sobic001G520100 Sobic002G257100--Sobic001G520100 Sobic005G093300 Sobic005G093300 Sobic002G257100--Sobic005G093300 Sobic002G265400 Sobic002G265400 Sobic002G257100--Sobic002G265400 Sobic005G063900 Sobic005G063900 Sobic002G257100--Sobic005G063900 Sobic001G339600--Sobic004G092000 Sobic001G339600--Sobic003G138400 Sobic010G214200 Sobic010G214200 Sobic001G339600--Sobic010G214200 Sobic001G339600--Sobic003G339900 Sobic001G339600--Sobic008G142100 Sobic002G216500 Sobic002G216500 Sobic001G339600--Sobic002G216500 Sobic004G220600 Sobic004G220600 Sobic001G339600--Sobic004G220600 Sobic001G387000 Sobic001G387000 Sobic001G339600--Sobic001G387000 Sobic001G319100 Sobic001G319100 Sobic001G339600--Sobic001G319100 Sobic006G114200 Sobic006G114200 Sobic001G314300--Sobic006G114200 Sobic001G095750 Sobic001G095750 Sobic001G314300--Sobic001G095750 Sobic003G109832 Sobic003G109832 Sobic001G314300--Sobic003G109832 Sobic001G314300--Sobic009G227800 Sobic001G314700 Sobic001G314700 Sobic001G314300--Sobic001G314700 Sobic001G314300--Sobic004G092000 Sobic001G314300--Sobic010G273700 Sobic002G185200 Sobic002G185200 Sobic001G314300--Sobic002G185200 Sobic001G314300--Sobic003G339900 Sobic001G075000 Sobic001G075000 Sobic008G142100--Sobic001G075000 Sobic008G142100--Sobic001G319100 Sobic008G142100--Sobic002G209100 Sobic008G142100--Sobic004G258400 Sobic004G195800 Sobic004G195800 Sobic008G142100--Sobic004G195800 Sobic008G142100--Sobic002G257100 Sobic001G381300 Sobic001G381300 Sobic008G142100--Sobic001G381300 Sobic008G142100--Sobic001G339600 Sobic008G142100--Sobic003G339900 Sobic003G359900 Sobic003G359900 Sobic005G072200--Sobic003G359900 Sobic006G052200 Sobic006G052200 Sobic005G072200--Sobic006G052200 Sobic005G072200--Sobic002G073900 Sobic010G080300 Sobic010G080300 Sobic005G072200--Sobic010G080300 Sobic009G190800 Sobic009G190800 Sobic005G072200--Sobic009G190800 Sobic001G351100 Sobic001G351100 Sobic005G072200--Sobic001G351100 Sobic003G402200 Sobic003G402200 Sobic005G072200--Sobic003G402200 Sobic004G096100 Sobic004G096100 Sobic005G072200--Sobic004G096100 Sobic001G314900 Sobic001G314900 Sobic005G072200--Sobic001G314900 Sobic010G273700--Sobic009G227800 Sobic010G273700--Sobic003G138400 Sobic010G273700--Sobic003G109832 Sobic010G273700--Sobic007G025900 Sobic007G215500 Sobic007G215500 Sobic010G273700--Sobic007G215500 Sobic004G006500 Sobic004G006500 Sobic010G273700--Sobic004G006500 Sobic010G273700--Sobic003G376200 Sobic010G273700--Sobic004G220600 Sobic010G273700--Sobic001G314300
Octagon: transcription factors


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