Gene annotation
Transcriptome id Sobic.009G227800.1
Synonym Sb09g028080, NSL1
Functional annotation membrane attack complex component/perforin/complement C9, putative, expressed
UniProt C5YVF8
Pfam PF01823
Panther DB PTHR33199 PTHR33199:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28380 : MAC/Perforin domain-containing protein
RAP-DB (Rice) LOC_Os05g48360.1 : membrane attack complex component/perforin/complement C9, putative, expressed
MaizeGDB (Corn) Zm00025a044519 , Zm00025a044520
Brachypodium KQK04958
Barley HORVU1Hr1G085480.1 , HORVU1Hr1G085480.2
Wheat TraesCS1B02G415100 , TraesCS1A02G387600 , TraesCS1D02G395600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G273700 no apical meristem protein, putative, expressed -
2 Sobic.003G109832 - -
3 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
4 Sobic.003G138400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY9, expressed -
5 Sobic.004G092000 expressed protein -
6 Sobic.003G376200 expressed protein -
7 Sobic.004G006500 expressed protein -
8 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.001G339600 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
10 Sobic.003G339900 expressed protein -
11 Sobic.007G025900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
12 Sobic.001G414000 TKL_IRAK_CrRLK1L-1.7 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
13 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
14 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.008G085350 - -
16 Sobic.003G258700 expressed protein -
17 Sobic.003G423200 NAM, putative, expressed -
18 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.002G209100 glutamate receptor, putative, expressed -
20 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -


Gene co-expression network
sample Sobic009G227800 Sobic009G227800 Sobic010G273700 Sobic010G273700 Sobic009G227800--Sobic010G273700 Sobic003G109832 Sobic003G109832 Sobic009G227800--Sobic003G109832 Sobic001G314300 Sobic001G314300 Sobic009G227800--Sobic001G314300 Sobic003G138400 Sobic003G138400 Sobic009G227800--Sobic003G138400 Sobic004G092000 Sobic004G092000 Sobic009G227800--Sobic004G092000 Sobic003G376200 Sobic003G376200 Sobic009G227800--Sobic003G376200 Sobic004G006500 Sobic004G006500 Sobic009G227800--Sobic004G006500 Sobic002G195800 Sobic002G195800 Sobic009G227800--Sobic002G195800 Sobic001G339600 Sobic001G339600 Sobic009G227800--Sobic001G339600 Sobic010G273700--Sobic009G227800 Sobic010G273700--Sobic003G138400 Sobic010G273700--Sobic003G109832 Sobic007G025900 Sobic007G025900 Sobic010G273700--Sobic007G025900 Sobic007G215500 Sobic007G215500 Sobic010G273700--Sobic007G215500 Sobic010G273700--Sobic004G006500 Sobic010G273700--Sobic003G376200 Sobic004G220600 Sobic004G220600 Sobic010G273700--Sobic004G220600 Sobic010G273700--Sobic001G314300 Sobic003G109832--Sobic010G273700 Sobic003G109832--Sobic001G314300 Sobic003G109832--Sobic009G227800 Sobic001G095750 Sobic001G095750 Sobic003G109832--Sobic001G095750 Sobic003G109832--Sobic004G006500 Sobic003G370400 Sobic003G370400 Sobic003G109832--Sobic003G370400 Sobic003G423200 Sobic003G423200 Sobic003G109832--Sobic003G423200 Sobic002G137800 Sobic002G137800 Sobic003G109832--Sobic002G137800 Sobic002G185200 Sobic002G185200 Sobic003G109832--Sobic002G185200 Sobic006G114200 Sobic006G114200 Sobic001G314300--Sobic006G114200 Sobic001G314300--Sobic001G095750 Sobic001G314300--Sobic003G109832 Sobic001G314300--Sobic009G227800 Sobic001G314700 Sobic001G314700 Sobic001G314300--Sobic001G314700 Sobic001G314300--Sobic004G092000 Sobic001G314300--Sobic010G273700 Sobic001G314300--Sobic002G185200 Sobic003G339900 Sobic003G339900 Sobic001G314300--Sobic003G339900 Sobic003G138400--Sobic010G273700 Sobic003G138400--Sobic004G220600 Sobic003G138400--Sobic004G006500 Sobic003G138400--Sobic001G339600 Sobic003G138400--Sobic009G227800 Sobic004G169900 Sobic004G169900 Sobic003G138400--Sobic004G169900 Sobic003G138400--Sobic004G092000 Sobic002G216500 Sobic002G216500 Sobic003G138400--Sobic002G216500 Sobic009G010400 Sobic009G010400 Sobic003G138400--Sobic009G010400 Sobic004G092000--Sobic003G376200 Sobic004G092000--Sobic003G339900 Sobic004G092000--Sobic001G339600 Sobic004G092000--Sobic001G314300 Sobic002G073900 Sobic002G073900 Sobic004G092000--Sobic002G073900 Sobic004G092000--Sobic003G138400 Sobic004G092000--Sobic009G227800 Sobic002G160600 Sobic002G160600 Sobic004G092000--Sobic002G160600 Sobic010G089700 Sobic010G089700 Sobic004G092000--Sobic010G089700 Sobic003G376200--Sobic004G220600 Sobic003G376200--Sobic002G216500 Sobic003G376200--Sobic004G092000 Sobic003G291700 Sobic003G291700 Sobic003G376200--Sobic003G291700 Sobic005G218500 Sobic005G218500 Sobic003G376200--Sobic005G218500 Sobic002G209100 Sobic002G209100 Sobic003G376200--Sobic002G209100 Sobic003G376200--Sobic010G273700 Sobic008G060300 Sobic008G060300 Sobic003G376200--Sobic008G060300 Sobic003G376200--Sobic002G195800 Sobic004G006500--Sobic002G185200 Sobic002G418900 Sobic002G418900 Sobic004G006500--Sobic002G418900 Sobic001G118900 Sobic001G118900 Sobic004G006500--Sobic001G118900 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G065900 Sobic004G065900 Sobic004G006500--Sobic004G065900 Sobic004G006500--Sobic002G195800 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic002G195800--Sobic004G006500 Sobic002G195800--Sobic003G376200 Sobic002G195800--Sobic006G114200 Sobic002G195800--Sobic002G185200 Sobic001G450500 Sobic001G450500 Sobic002G195800--Sobic001G450500 Sobic002G195800--Sobic002G418900 Sobic007G139900 Sobic007G139900 Sobic002G195800--Sobic007G139900 Sobic002G195800--Sobic009G227800 Sobic004G114500 Sobic004G114500 Sobic002G195800--Sobic004G114500 Sobic001G339600--Sobic004G092000 Sobic001G339600--Sobic003G138400 Sobic010G214200 Sobic010G214200 Sobic001G339600--Sobic010G214200 Sobic001G339600--Sobic003G339900 Sobic008G142100 Sobic008G142100 Sobic001G339600--Sobic008G142100 Sobic001G339600--Sobic002G216500 Sobic001G339600--Sobic004G220600 Sobic001G387000 Sobic001G387000 Sobic001G339600--Sobic001G387000 Sobic001G319100 Sobic001G319100 Sobic001G339600--Sobic001G319100
Octagon: transcription factors


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