Gene annotation
Transcriptome id Sobic.003G258700.3
Synonym Sb03g031300
Functional annotation expressed protein
UniProt A0A1B6Q5E1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g48950.1 : expressed protein
MaizeGDB (Corn) Zm00025a028024 , Zm00025a038838
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G160300 expressed protein -
2 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
3 Sobic.001G363200 expressed protein -
4 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
6 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
7 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
8 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
9 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
11 Sobic.001G381300 WRKY79, expressed -
12 Sobic.002G241250 - -
13 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
14 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
15 Sobic.002G249600 OsWAK80 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
17 Sobic.006G246200 protein kinase, putative, expressed -
18 Sobic.010G273700 no apical meristem protein, putative, expressed -
19 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
20 Sobic.009G241500 expressed protein -


Gene co-expression network
sample Sobic003G258700 Sobic003G258700 Sobic004G160300 Sobic004G160300 Sobic003G258700--Sobic004G160300 Sobic002G202800 Sobic002G202800 Sobic003G258700--Sobic002G202800 Sobic001G363200 Sobic001G363200 Sobic003G258700--Sobic001G363200 Sobic005G165900 Sobic005G165900 Sobic003G258700--Sobic005G165900 Sobic004G181200 Sobic004G181200 Sobic003G258700--Sobic004G181200 Sobic003G291700 Sobic003G291700 Sobic003G258700--Sobic003G291700 Sobic003G242800 Sobic003G242800 Sobic003G258700--Sobic003G242800 Sobic002G386200 Sobic002G386200 Sobic003G258700--Sobic002G386200 Sobic003G037100 Sobic003G037100 Sobic003G258700--Sobic003G037100 Sobic004G160300--Sobic001G363200 Sobic004G160300--Sobic003G258700 Sobic004G160300--Sobic004G181200 Sobic004G160300--Sobic003G037100 Sobic002G174300 Sobic002G174300 Sobic004G160300--Sobic002G174300 Sobic002G241250 Sobic002G241250 Sobic004G160300--Sobic002G241250 Sobic004G160300--Sobic002G386200 Sobic006G113400 Sobic006G113400 Sobic004G160300--Sobic006G113400 Sobic001G146500 Sobic001G146500 Sobic004G160300--Sobic001G146500 Sobic002G202800--Sobic003G258700 Sobic002G064200 Sobic002G064200 Sobic002G202800--Sobic002G064200 Sobic002G354400 Sobic002G354400 Sobic002G202800--Sobic002G354400 Sobic003G325100 Sobic003G325100 Sobic002G202800--Sobic003G325100 Sobic002G202800--Sobic003G037100 Sobic009G115500 Sobic009G115500 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic001G363200--Sobic004G160300 Sobic001G363200--Sobic004G181200 Sobic001G363200--Sobic002G354400 Sobic001G363200--Sobic003G258700 Sobic001G363200--Sobic002G202800 Sobic002G173900 Sobic002G173900 Sobic001G363200--Sobic002G173900 Sobic001G363200--Sobic002G064200 Sobic001G363200--Sobic003G037100 Sobic003G256000 Sobic003G256000 Sobic001G363200--Sobic003G256000 Sobic005G165900--Sobic002G174300 Sobic005G165900--Sobic003G258700 Sobic005G165900--Sobic002G386200 Sobic005G165900--Sobic004G160300 Sobic001G071300 Sobic001G071300 Sobic005G165900--Sobic001G071300 Sobic004G169900 Sobic004G169900 Sobic005G165900--Sobic004G169900 Sobic005G165900--Sobic004G181200 Sobic009G214300 Sobic009G214300 Sobic005G165900--Sobic009G214300 Sobic004G220600 Sobic004G220600 Sobic005G165900--Sobic004G220600 Sobic004G181200--Sobic006G113400 Sobic004G181200--Sobic001G363200 Sobic004G181200--Sobic004G160300 Sobic001G259500 Sobic001G259500 Sobic004G181200--Sobic001G259500 Sobic006G246200 Sobic006G246200 Sobic004G181200--Sobic006G246200 Sobic010G045000 Sobic010G045000 Sobic003G291700--Sobic010G045000 Sobic008G060300 Sobic008G060300 Sobic003G291700--Sobic008G060300 Sobic006G113900 Sobic006G113900 Sobic003G291700--Sobic006G113900 Sobic005G082700 Sobic005G082700 Sobic003G291700--Sobic005G082700 Sobic001G381300 Sobic001G381300 Sobic003G291700--Sobic001G381300 Sobic005G193600 Sobic005G193600 Sobic003G291700--Sobic005G193600 Sobic003G291700--Sobic003G258700 Sobic006G229500 Sobic006G229500 Sobic003G291700--Sobic006G229500 Sobic003G376200 Sobic003G376200 Sobic003G291700--Sobic003G376200 Sobic003G242800--Sobic002G202800 Sobic003G242800--Sobic003G258700 Sobic004G138400 Sobic004G138400 Sobic003G242800--Sobic004G138400 Sobic003G242800--Sobic003G325100 Sobic003G242800--Sobic002G064200 Sobic003G242800--Sobic005G165900 Sobic003G242800--Sobic004G160300 Sobic003G242800--Sobic001G363200 Sobic001G330925 Sobic001G330925 Sobic003G242800--Sobic001G330925 Sobic010G018300 Sobic010G018300 Sobic002G386200--Sobic010G018300 Sobic001G146400 Sobic001G146400 Sobic002G386200--Sobic001G146400 Sobic002G386200--Sobic004G181200 Sobic002G386200--Sobic001G146500 Sobic002G386200--Sobic002G174300 Sobic002G386200--Sobic006G246200 Sobic002G386200--Sobic006G113400 Sobic002G386200--Sobic002G241250 Sobic002G386200--Sobic001G381300 Sobic005G226100 Sobic005G226100 Sobic003G037100--Sobic005G226100 Sobic002G269032 Sobic002G269032 Sobic003G037100--Sobic002G269032 Sobic008G181801 Sobic008G181801 Sobic003G037100--Sobic008G181801 Sobic009G241500 Sobic009G241500 Sobic003G037100--Sobic009G241500 Sobic003G037100--Sobic001G259500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.