Gene annotation
Transcriptome id Sobic.003G242800.2
Synonym WRKY41, AtWRKY41, Sb03g029920
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
WRKY15, expressed
UniProt C5XFA6
Pfam PF03106
Panther DB PTHR32096 PTHR32096:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G11070 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os01g46800.1 : WRKY15, expressed
MaizeGDB (Corn) Zm00025a027056 , Zm00025a028194 , Zm00025a039768 , Zm00025a036657 , Zm00025a038706
Brachypodium KQK09011 , KQK09010 , KQJ98088
Barley HORVU3Hr1G059220.4 , HORVU3Hr1G059220.3 , HORVU3Hr1G059220.2 , HORVU3Hr1G059210.1 , HORVU2Hr1G029430.1 , HORVU2Hr1G029430.2 , HORVU3Hr1G059220.1 , HORVU1Hr1G090170.1
Wheat TraesCS2D02G168600 , TraesCS3D02G238300 , TraesCS2A02G161500 , TraesCS2B02G187500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
2 Sobic.003G258700 expressed protein -
3 Sobic.004G138400 WRKY51, expressed -
4 Sobic.003G325100 NB-ARC domain containing protein, expressed -
5 Sobic.002G064200 expressed protein -
6 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.004G160300 expressed protein -
8 Sobic.001G363200 expressed protein -
9 Sobic.001G330925 - -
10 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
11 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
12 Sobic.010G273700 no apical meristem protein, putative, expressed -
13 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
14 Sobic.003G366100 expressed protein -
15 Sobic.009G214300 expressed protein -
16 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
17 Sobic.002G220300 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
18 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G109832 - -
20 Sobic.010G004500 expressed protein -


Gene co-expression network
sample Sobic003G242800 Sobic003G242800 Sobic002G202800 Sobic002G202800 Sobic003G242800--Sobic002G202800 Sobic003G258700 Sobic003G258700 Sobic003G242800--Sobic003G258700 Sobic004G138400 Sobic004G138400 Sobic003G242800--Sobic004G138400 Sobic003G325100 Sobic003G325100 Sobic003G242800--Sobic003G325100 Sobic002G064200 Sobic002G064200 Sobic003G242800--Sobic002G064200 Sobic005G165900 Sobic005G165900 Sobic003G242800--Sobic005G165900 Sobic004G160300 Sobic004G160300 Sobic003G242800--Sobic004G160300 Sobic001G363200 Sobic001G363200 Sobic003G242800--Sobic001G363200 Sobic001G330925 Sobic001G330925 Sobic003G242800--Sobic001G330925 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G354400 Sobic002G354400 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic009G115500 Sobic009G115500 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic003G258700--Sobic004G160300 Sobic003G258700--Sobic002G202800 Sobic003G258700--Sobic001G363200 Sobic003G258700--Sobic005G165900 Sobic004G181200 Sobic004G181200 Sobic003G258700--Sobic004G181200 Sobic003G291700 Sobic003G291700 Sobic003G258700--Sobic003G291700 Sobic003G258700--Sobic003G242800 Sobic002G386200 Sobic002G386200 Sobic003G258700--Sobic002G386200 Sobic003G258700--Sobic003G037100 Sobic004G138400--Sobic003G325100 Sobic009G111800 Sobic009G111800 Sobic004G138400--Sobic009G111800 Sobic004G138400--Sobic001G330925 Sobic004G138400--Sobic002G202800 Sobic004G106200 Sobic004G106200 Sobic004G138400--Sobic004G106200 Sobic004G109100 Sobic004G109100 Sobic004G138400--Sobic004G109100 Sobic004G138400--Sobic003G242800 Sobic001G321700 Sobic001G321700 Sobic004G138400--Sobic001G321700 Sobic001G476100 Sobic001G476100 Sobic004G138400--Sobic001G476100 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic003G325100--Sobic009G111800 Sobic003G325100--Sobic003G242800 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic002G064200--Sobic002G202800 Sobic002G064200--Sobic009G115500 Sobic010G172300 Sobic010G172300 Sobic002G064200--Sobic010G172300 Sobic002G064200--Sobic002G202700 Sobic010G225500 Sobic010G225500 Sobic002G064200--Sobic010G225500 Sobic002G130500 Sobic002G130500 Sobic002G064200--Sobic002G130500 Sobic002G173900 Sobic002G173900 Sobic002G064200--Sobic002G173900 Sobic006G007450 Sobic006G007450 Sobic002G064200--Sobic006G007450 Sobic002G064200--Sobic001G363200 Sobic002G174300 Sobic002G174300 Sobic005G165900--Sobic002G174300 Sobic005G165900--Sobic003G258700 Sobic005G165900--Sobic002G386200 Sobic005G165900--Sobic004G160300 Sobic001G071300 Sobic001G071300 Sobic005G165900--Sobic001G071300 Sobic004G169900 Sobic004G169900 Sobic005G165900--Sobic004G169900 Sobic005G165900--Sobic004G181200 Sobic009G214300 Sobic009G214300 Sobic005G165900--Sobic009G214300 Sobic004G220600 Sobic004G220600 Sobic005G165900--Sobic004G220600 Sobic004G160300--Sobic001G363200 Sobic004G160300--Sobic003G258700 Sobic004G160300--Sobic004G181200 Sobic004G160300--Sobic003G037100 Sobic004G160300--Sobic002G174300 Sobic002G241250 Sobic002G241250 Sobic004G160300--Sobic002G241250 Sobic004G160300--Sobic002G386200 Sobic006G113400 Sobic006G113400 Sobic004G160300--Sobic006G113400 Sobic001G146500 Sobic001G146500 Sobic004G160300--Sobic001G146500 Sobic001G363200--Sobic004G160300 Sobic001G363200--Sobic004G181200 Sobic001G363200--Sobic002G354400 Sobic001G363200--Sobic003G258700 Sobic001G363200--Sobic002G202800 Sobic001G363200--Sobic002G173900 Sobic001G363200--Sobic002G064200 Sobic001G363200--Sobic003G037100 Sobic003G256000 Sobic003G256000 Sobic001G363200--Sobic003G256000 Sobic001G330925--Sobic004G138400 Sobic001G330925--Sobic002G202800 Sobic001G330925--Sobic009G115500 Sobic002G214500 Sobic002G214500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic001G330925--Sobic003G242800 Sobic001G330925--Sobic003G325100 Sobic001G330925--Sobic003G258700 Sobic001G330925--Sobic002G354400
Octagon: transcription factors


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