Gene annotation
Transcriptome id Sobic.010G004500.1
Synonym
Functional annotation expressed protein
UniProt C5Z258
Pfam PF13962 PF12796
Panther DB PTHR24177 PTHR24177:SF20
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03460 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os07g31070.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2A02G045300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G325100 NB-ARC domain containing protein, expressed -
2 Sobic.008G095100 SAM domain containing protein, putative, expressed -
3 Sobic.001G059300 acetyltransferase, GNAT family, putative, expressed -
4 Sobic.002G070700 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
5 Sobic.009G092200 - -
6 Sobic.007G072166 - -
7 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
8 Sobic.003G080500 Ser/Thr protein kinase, putative, expressed -
9 Sobic.004G157200 - -
10 Sobic.007G189300 DC1 domain containing protein, expressed -
11 Sobic.006G007450 - -
12 Sobic.006G014900 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
13 Sobic.005G171200 transporter family protein, putative, expressed -
14 Sobic.002G064200 expressed protein -
15 Sobic.005G008101 - -
16 Sobic.006G030250 - -
17 Sobic.008G049300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ECAGL2 - ECA1 gametogenesis related family protein precursor, expressed -
18 Sobic.010G127500 hydrolase, alpha/beta fold family domain containing protein, expressed -
19 Sobic.003G310000 no apical meristem protein, expressed -
20 Sobic.008G139100 MLA12, putative, expressed -


Gene co-expression network
sample Sobic010G004500 Sobic010G004500 Sobic003G325100 Sobic003G325100 Sobic010G004500--Sobic003G325100 Sobic008G095100 Sobic008G095100 Sobic010G004500--Sobic008G095100 Sobic001G059300 Sobic001G059300 Sobic010G004500--Sobic001G059300 Sobic002G070700 Sobic002G070700 Sobic010G004500--Sobic002G070700 Sobic009G092200 Sobic009G092200 Sobic010G004500--Sobic009G092200 Sobic007G072166 Sobic007G072166 Sobic010G004500--Sobic007G072166 Sobic002G202800 Sobic002G202800 Sobic010G004500--Sobic002G202800 Sobic003G080500 Sobic003G080500 Sobic010G004500--Sobic003G080500 Sobic004G157200 Sobic004G157200 Sobic010G004500--Sobic004G157200 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G242800 Sobic003G242800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic003G325100--Sobic001G059300 Sobic008G095100--Sobic003G325100 Sobic008G095100--Sobic010G004500 Sobic006G007450 Sobic006G007450 Sobic008G095100--Sobic006G007450 Sobic009G173800 Sobic009G173800 Sobic008G095100--Sobic009G173800 Sobic009G082800 Sobic009G082800 Sobic008G095100--Sobic009G082800 Sobic008G095100--Sobic002G202800 Sobic008G095100--Sobic002G064200 Sobic002G174801 Sobic002G174801 Sobic008G095100--Sobic002G174801 Sobic003G401500 Sobic003G401500 Sobic008G095100--Sobic003G401500 Sobic006G030250 Sobic006G030250 Sobic001G059300--Sobic006G030250 Sobic010G127500 Sobic010G127500 Sobic001G059300--Sobic010G127500 Sobic008G091100 Sobic008G091100 Sobic001G059300--Sobic008G091100 Sobic004G087432 Sobic004G087432 Sobic001G059300--Sobic004G087432 Sobic002G373500 Sobic002G373500 Sobic001G059300--Sobic002G373500 Sobic001G317900 Sobic001G317900 Sobic001G059300--Sobic001G317900 Sobic002G070700--Sobic003G080500 Sobic002G070700--Sobic007G072166 Sobic007G189300 Sobic007G189300 Sobic002G070700--Sobic007G189300 Sobic002G070700--Sobic006G030250 Sobic002G070700--Sobic010G127500 Sobic001G028301 Sobic001G028301 Sobic002G070700--Sobic001G028301 Sobic007G223150 Sobic007G223150 Sobic002G070700--Sobic007G223150 Sobic005G134301 Sobic005G134301 Sobic002G070700--Sobic005G134301 Sobic002G070700--Sobic008G091100 Sobic009G092200--Sobic006G030250 Sobic009G092200--Sobic010G127500 Sobic009G092200--Sobic008G091100 Sobic009G092200--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic009G092200--Sobic005G083932 Sobic002G191200 Sobic002G191200 Sobic009G092200--Sobic002G191200 Sobic007G072166--Sobic002G070700 Sobic007G072166--Sobic003G080500 Sobic002G253200 Sobic002G253200 Sobic007G072166--Sobic002G253200 Sobic007G072166--Sobic010G004500 Sobic007G072166--Sobic001G028301 Sobic007G072166--Sobic007G223150 Sobic001G417100 Sobic001G417100 Sobic007G072166--Sobic001G417100 Sobic007G135301 Sobic007G135301 Sobic007G072166--Sobic007G135301 Sobic007G072166--Sobic006G030250 Sobic003G258700 Sobic003G258700 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G354400 Sobic002G354400 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic009G115500 Sobic009G115500 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic001G363200 Sobic001G363200 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic003G080500--Sobic006G030250 Sobic003G080500--Sobic010G127500 Sobic003G080500--Sobic001G417100 Sobic001G520050 Sobic001G520050 Sobic003G080500--Sobic001G520050 Sobic003G080500--Sobic002G191200 Sobic007G115050 Sobic007G115050 Sobic003G080500--Sobic007G115050 Sobic003G080500--Sobic001G317900 Sobic002G277000 Sobic002G277000 Sobic004G157200--Sobic002G277000 Sobic004G157200--Sobic010G127500 Sobic004G157200--Sobic002G373500 Sobic004G157200--Sobic006G030250 Sobic004G157200--Sobic001G317900 Sobic004G157200--Sobic005G083932
Octagon: transcription factors


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