Gene annotation
Transcriptome id Sobic.003G080500.2
Synonym
Functional annotation Ser/Thr protein kinase, putative, expressed
UniProt A0A1W0VW54
Pfam PF13947 PF14380
Panther DB PTHR27005 PTHR27005:SF55
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18390 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g04570.1 : Ser/Thr protein kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G030250 - -
2 Sobic.010G127500 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.001G417100 - -
4 Sobic.001G520050 - -
5 Sobic.002G191200 OsFBX55 - F-box domain containing protein, expressed -
6 Sobic.007G115050 - -
7 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.005G083932 - -
12 Sobic.001G260900 - -
13 Sobic.008G091100 - -
14 Sobic.002G288800 serine/threonine-protein kinase receptor precursor, putative, expressed -
15 Sobic.005G134301 - -
16 Sobic.008G174400 OsFBX464 - F-box domain containing protein, expressed -
17 Sobic.007G080660 - -
18 Sobic.005G145000 expressed protein -
19 Sobic.002G373500 OsFBX152 - F-box domain containing protein, expressed -
20 Sobic.002G070700 anthocyanidin 3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G080500 Sobic003G080500 Sobic006G030250 Sobic006G030250 Sobic003G080500--Sobic006G030250 Sobic010G127500 Sobic010G127500 Sobic003G080500--Sobic010G127500 Sobic001G417100 Sobic001G417100 Sobic003G080500--Sobic001G417100 Sobic001G520050 Sobic001G520050 Sobic003G080500--Sobic001G520050 Sobic002G191200 Sobic002G191200 Sobic003G080500--Sobic002G191200 Sobic007G115050 Sobic007G115050 Sobic003G080500--Sobic007G115050 Sobic001G317900 Sobic001G317900 Sobic003G080500--Sobic001G317900 Sobic006G030250--Sobic010G127500 Sobic006G030250--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic006G030250--Sobic005G083932 Sobic008G174400 Sobic008G174400 Sobic006G030250--Sobic008G174400 Sobic006G030250--Sobic002G191200 Sobic002G373500 Sobic002G373500 Sobic006G030250--Sobic002G373500 Sobic010G127500--Sobic006G030250 Sobic010G127500--Sobic001G317900 Sobic010G127500--Sobic005G083932 Sobic010G127500--Sobic008G174400 Sobic010G127500--Sobic002G191200 Sobic010G127500--Sobic002G373500 Sobic001G417100--Sobic007G115050 Sobic001G260900 Sobic001G260900 Sobic001G417100--Sobic001G260900 Sobic001G195550 Sobic001G195550 Sobic001G417100--Sobic001G195550 Sobic001G417100--Sobic001G317900 Sobic001G417100--Sobic005G083932 Sobic001G417100--Sobic008G174400 Sobic001G520050--Sobic001G317900 Sobic001G520050--Sobic005G083932 Sobic001G520050--Sobic008G174400 Sobic001G520050--Sobic002G191200 Sobic001G520050--Sobic002G373500 Sobic001G520050--Sobic010G127500 Sobic002G191200--Sobic001G317900 Sobic002G191200--Sobic005G083932 Sobic002G191200--Sobic008G174400 Sobic002G191200--Sobic002G373500 Sobic007G080660 Sobic007G080660 Sobic002G191200--Sobic007G080660 Sobic002G191200--Sobic010G127500 Sobic007G115050--Sobic001G260900 Sobic007G115050--Sobic001G317900 Sobic007G115050--Sobic005G083932 Sobic005G134301 Sobic005G134301 Sobic007G115050--Sobic005G134301 Sobic007G115050--Sobic008G174400 Sobic007G115050--Sobic002G191200 Sobic001G317900--Sobic001G317900 Sobic001G317900--Sobic005G083932 Sobic001G317900--Sobic008G174400 Sobic001G317900--Sobic002G191200 Sobic001G317900--Sobic002G373500 Sobic001G317900--Sobic010G127500 Sobic001G317900--Sobic007G080660
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.