Gene annotation
Transcriptome id Sobic.005G145000.1
Synonym Sb05g020980
Functional annotation expressed protein
UniProt C5Y3X3
Pfam -
Panther DB PTHR34483 PTHR34483:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G18680 : -
RAP-DB (Rice) LOC_Os09g04339.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.005G083932 - -
6 Sobic.008G174400 OsFBX464 - F-box domain containing protein, expressed -
7 Sobic.002G191200 OsFBX55 - F-box domain containing protein, expressed -
8 Sobic.002G373500 OsFBX152 - F-box domain containing protein, expressed -
9 Sobic.010G127500 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.007G080660 - -
11 Sobic.001G260900 - -
12 Sobic.007G115050 - -
13 Sobic.004G087432 - -
14 Sobic.008G091100 - -
15 Sobic.006G030250 - -
16 Sobic.005G134301 - -
17 Sobic.002G277000 - -
18 Sobic.002G288800 serine/threonine-protein kinase receptor precursor, putative, expressed -
19 Sobic.001G417100 - -
20 Sobic.002G079200 EF hand family protein, putative, expressed K02183: calmodulin


Gene co-expression network
sample Sobic005G145000 Sobic005G145000 Sobic001G317900 Sobic001G317900 Sobic005G145000--Sobic001G317900 Sobic005G083932 Sobic005G083932 Sobic005G145000--Sobic005G083932 Sobic008G174400 Sobic008G174400 Sobic005G145000--Sobic008G174400 Sobic002G191200 Sobic002G191200 Sobic005G145000--Sobic002G191200 Sobic002G373500 Sobic002G373500 Sobic005G145000--Sobic002G373500 Sobic010G127500 Sobic010G127500 Sobic005G145000--Sobic010G127500 Sobic001G317900--Sobic001G317900 Sobic001G317900--Sobic005G083932 Sobic001G317900--Sobic008G174400 Sobic001G317900--Sobic002G191200 Sobic001G317900--Sobic002G373500 Sobic001G317900--Sobic010G127500 Sobic007G080660 Sobic007G080660 Sobic001G317900--Sobic007G080660 Sobic005G083932--Sobic001G317900 Sobic005G083932--Sobic008G174400 Sobic005G083932--Sobic002G191200 Sobic005G083932--Sobic002G373500 Sobic005G083932--Sobic010G127500 Sobic005G083932--Sobic007G080660 Sobic008G174400--Sobic001G317900 Sobic008G174400--Sobic002G373500 Sobic008G174400--Sobic005G083932 Sobic008G174400--Sobic002G191200 Sobic008G174400--Sobic010G127500 Sobic008G174400--Sobic007G080660 Sobic002G191200--Sobic001G317900 Sobic002G191200--Sobic005G083932 Sobic002G191200--Sobic008G174400 Sobic002G191200--Sobic002G373500 Sobic002G191200--Sobic007G080660 Sobic002G191200--Sobic010G127500 Sobic002G373500--Sobic008G174400 Sobic002G373500--Sobic001G317900 Sobic002G373500--Sobic005G083932 Sobic002G373500--Sobic002G191200 Sobic002G373500--Sobic010G127500 Sobic002G373500--Sobic007G080660 Sobic006G030250 Sobic006G030250 Sobic010G127500--Sobic006G030250 Sobic010G127500--Sobic001G317900 Sobic010G127500--Sobic005G083932 Sobic010G127500--Sobic008G174400 Sobic010G127500--Sobic002G191200 Sobic010G127500--Sobic002G373500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.