Gene annotation
Transcriptome id Sobic.002G079200.1
Synonym Sb02g006630
Functional annotation EF hand family protein, putative, expressed
UniProt A0A1W0W2W6
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF584
NCBI CDD -
KEGG Orthology K02183; calmodulin
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03290 : EF hand calcium-binding protein family
RAP-DB (Rice) LOC_Os07g12240.1 : EF hand family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.001G317900 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.008G174400 OsFBX464 - F-box domain containing protein, expressed -
6 Sobic.005G083932 - -
7 Sobic.002G373500 OsFBX152 - F-box domain containing protein, expressed -
8 Sobic.002G191200 OsFBX55 - F-box domain containing protein, expressed -
9 Sobic.007G080660 - -
10 Sobic.010G127500 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.002G288800 serine/threonine-protein kinase receptor precursor, putative, expressed -
12 Sobic.001G260900 - -
13 Sobic.004G087432 - -
14 Sobic.007G115050 - -
15 Sobic.005G145000 expressed protein -
16 Sobic.006G030250 - -
17 Sobic.008G091100 - -
18 Sobic.005G134301 - -
19 Sobic.002G277000 - -
20 Sobic.001G417100 - -


Gene co-expression network
sample Sobic002G079200 Sobic002G079200 Sobic001G317900 Sobic001G317900 Sobic002G079200--Sobic001G317900 Sobic008G174400 Sobic008G174400 Sobic002G079200--Sobic008G174400 Sobic005G083932 Sobic005G083932 Sobic002G079200--Sobic005G083932 Sobic002G373500 Sobic002G373500 Sobic002G079200--Sobic002G373500 Sobic002G191200 Sobic002G191200 Sobic002G079200--Sobic002G191200 Sobic007G080660 Sobic007G080660 Sobic002G079200--Sobic007G080660 Sobic001G317900--Sobic001G317900 Sobic001G317900--Sobic005G083932 Sobic001G317900--Sobic008G174400 Sobic001G317900--Sobic002G191200 Sobic001G317900--Sobic002G373500 Sobic010G127500 Sobic010G127500 Sobic001G317900--Sobic010G127500 Sobic001G317900--Sobic007G080660 Sobic008G174400--Sobic001G317900 Sobic008G174400--Sobic002G373500 Sobic008G174400--Sobic005G083932 Sobic008G174400--Sobic002G191200 Sobic008G174400--Sobic010G127500 Sobic008G174400--Sobic007G080660 Sobic005G083932--Sobic001G317900 Sobic005G083932--Sobic008G174400 Sobic005G083932--Sobic002G191200 Sobic005G083932--Sobic002G373500 Sobic005G083932--Sobic010G127500 Sobic005G083932--Sobic007G080660 Sobic002G373500--Sobic008G174400 Sobic002G373500--Sobic001G317900 Sobic002G373500--Sobic005G083932 Sobic002G373500--Sobic002G191200 Sobic002G373500--Sobic010G127500 Sobic002G373500--Sobic007G080660 Sobic002G191200--Sobic001G317900 Sobic002G191200--Sobic005G083932 Sobic002G191200--Sobic008G174400 Sobic002G191200--Sobic002G373500 Sobic002G191200--Sobic007G080660 Sobic002G191200--Sobic010G127500 Sobic007G080660--Sobic002G191200 Sobic007G080660--Sobic001G317900 Sobic007G080660--Sobic005G083932 Sobic007G080660--Sobic008G174400 Sobic007G080660--Sobic002G373500 Sobic007G080660--Sobic010G127500
Octagon: transcription factors


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