Gene annotation
Transcriptome id Sobic.008G095100.1
Synonym Sb08g014080
Functional annotation SAM domain containing protein, putative, expressed
UniProt C5YNM0
Pfam PF00536
Panther DB PTHR10627
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G48800 : Sterile alpha motif (SAM) domain-containing protein
RAP-DB (Rice) LOC_Os12g29480.1 : SAM domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a024874
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G095100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G325100 NB-ARC domain containing protein, expressed -
2 Sobic.010G004500 expressed protein -
3 Sobic.006G007450 - -
4 Sobic.009G173800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein, putative, expressed -
5 Sobic.009G082800 - -
6 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
7 Sobic.002G064200 expressed protein -
8 Sobic.002G174801 - -
9 Sobic.003G401500 expressed protein -
10 Sobic.004G179500 APO, putative, expressed -
11 Sobic.004G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.004G138400 WRKY51, expressed -
13 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
15 Sobic.001G448800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lecithin cholesterol acyltransferase, putative, expressed -
16 Sobic.002G202700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY76, expressed -
17 Sobic.006G014900 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
18 Sobic.009G115300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G007650 - -
20 Sobic.004G106200 receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic008G095100 Sobic008G095100 Sobic003G325100 Sobic003G325100 Sobic008G095100--Sobic003G325100 Sobic010G004500 Sobic010G004500 Sobic008G095100--Sobic010G004500 Sobic006G007450 Sobic006G007450 Sobic008G095100--Sobic006G007450 Sobic009G173800 Sobic009G173800 Sobic008G095100--Sobic009G173800 Sobic009G082800 Sobic009G082800 Sobic008G095100--Sobic009G082800 Sobic002G202800 Sobic002G202800 Sobic008G095100--Sobic002G202800 Sobic002G064200 Sobic002G064200 Sobic008G095100--Sobic002G064200 Sobic002G174801 Sobic002G174801 Sobic008G095100--Sobic002G174801 Sobic003G401500 Sobic003G401500 Sobic008G095100--Sobic003G401500 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic003G325100--Sobic010G004500 Sobic003G325100--Sobic002G064200 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G242800 Sobic003G242800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic010G004500--Sobic003G325100 Sobic010G004500--Sobic008G095100 Sobic010G004500--Sobic001G059300 Sobic002G070700 Sobic002G070700 Sobic010G004500--Sobic002G070700 Sobic009G092200 Sobic009G092200 Sobic010G004500--Sobic009G092200 Sobic007G072166 Sobic007G072166 Sobic010G004500--Sobic007G072166 Sobic010G004500--Sobic002G202800 Sobic003G080500 Sobic003G080500 Sobic010G004500--Sobic003G080500 Sobic004G157200 Sobic004G157200 Sobic010G004500--Sobic004G157200 Sobic006G007650 Sobic006G007650 Sobic006G007450--Sobic006G007650 Sobic006G007450--Sobic002G064200 Sobic002G202700 Sobic002G202700 Sobic006G007450--Sobic002G202700 Sobic010G225500 Sobic010G225500 Sobic006G007450--Sobic010G225500 Sobic009G115300 Sobic009G115300 Sobic006G007450--Sobic009G115300 Sobic002G108400 Sobic002G108400 Sobic006G007450--Sobic002G108400 Sobic008G028600 Sobic008G028600 Sobic006G007450--Sobic008G028600 Sobic006G007450--Sobic008G095100 Sobic002G334500 Sobic002G334500 Sobic006G007450--Sobic002G334500 Sobic009G115500 Sobic009G115500 Sobic009G173800--Sobic009G115500 Sobic009G173800--Sobic008G095100 Sobic009G173800--Sobic002G064200 Sobic009G173800--Sobic003G401500 Sobic009G173800--Sobic002G202800 Sobic009G173800--Sobic003G325100 Sobic009G173800--Sobic009G082800 Sobic003G086200 Sobic003G086200 Sobic009G173800--Sobic003G086200 Sobic002G173900 Sobic002G173900 Sobic009G173800--Sobic002G173900 Sobic009G082800--Sobic002G064200 Sobic004G303500 Sobic004G303500 Sobic009G082800--Sobic004G303500 Sobic010G172300 Sobic010G172300 Sobic009G082800--Sobic010G172300 Sobic009G082800--Sobic009G115300 Sobic009G082800--Sobic010G225500 Sobic010G046900 Sobic010G046900 Sobic009G082800--Sobic010G046900 Sobic009G082800--Sobic002G202700 Sobic009G082800--Sobic008G095100 Sobic009G082800--Sobic002G173900 Sobic003G258700 Sobic003G258700 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G354400 Sobic002G354400 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic001G363200 Sobic001G363200 Sobic002G202800--Sobic001G363200 Sobic002G202800--Sobic002G202700 Sobic002G064200--Sobic002G202800 Sobic002G064200--Sobic009G115500 Sobic002G064200--Sobic010G172300 Sobic002G064200--Sobic002G202700 Sobic002G064200--Sobic010G225500 Sobic002G130500 Sobic002G130500 Sobic002G064200--Sobic002G130500 Sobic002G064200--Sobic002G173900 Sobic002G064200--Sobic006G007450 Sobic002G064200--Sobic001G363200 Sobic001G448800 Sobic001G448800 Sobic002G174801--Sobic001G448800 Sobic002G174801--Sobic009G115300 Sobic004G078600 Sobic004G078600 Sobic002G174801--Sobic004G078600 Sobic003G310200 Sobic003G310200 Sobic002G174801--Sobic003G310200 Sobic001G012000 Sobic001G012000 Sobic002G174801--Sobic001G012000 Sobic009G115400 Sobic009G115400 Sobic002G174801--Sobic009G115400 Sobic002G174801--Sobic002G202700 Sobic003G378301 Sobic003G378301 Sobic002G174801--Sobic003G378301 Sobic002G174801--Sobic006G007650 Sobic001G330925 Sobic001G330925 Sobic003G401500--Sobic001G330925 Sobic003G401500--Sobic009G173800 Sobic003G401500--Sobic002G064200 Sobic003G401500--Sobic001G448800 Sobic009G233900 Sobic009G233900 Sobic003G401500--Sobic009G233900 Sobic004G179500 Sobic004G179500 Sobic003G401500--Sobic004G179500 Sobic003G401500--Sobic004G138400 Sobic003G401500--Sobic009G115500 Sobic003G401500--Sobic009G082800
Octagon: transcription factors


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