Gene annotation
Transcriptome id Sobic.003G325100.1
Synonym Sb03g037120
Functional annotation NB-ARC domain containing protein, expressed
UniProt C5XMF5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF411
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45490 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g58510.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027203
Brachypodium KQK10169
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G138400 WRKY51, expressed -
2 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
3 Sobic.010G004500 expressed protein -
4 Sobic.002G064200 expressed protein -
5 Sobic.008G095100 SAM domain containing protein, putative, expressed -
6 Sobic.009G111800 OsFBO5 - F-box and other domain containing protein, expressed -
7 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
8 Sobic.004G106200 receptor-like kinase, putative, expressed -
9 Sobic.001G059300 acetyltransferase, GNAT family, putative, expressed -
10 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
11 Sobic.004G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.009G092200 - -
13 Sobic.001G363200 expressed protein -
14 Sobic.005G008101 - -
15 Sobic.001G330925 - -
16 Sobic.009G173800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein, putative, expressed -
17 Sobic.007G189300 DC1 domain containing protein, expressed -
18 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G093700 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.005G171200 transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic003G325100 Sobic003G325100 Sobic004G138400 Sobic004G138400 Sobic003G325100--Sobic004G138400 Sobic002G202800 Sobic002G202800 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic009G111800 Sobic009G111800 Sobic003G325100--Sobic009G111800 Sobic003G242800 Sobic003G242800 Sobic003G325100--Sobic003G242800 Sobic004G106200 Sobic004G106200 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic004G138400--Sobic003G325100 Sobic004G138400--Sobic009G111800 Sobic001G330925 Sobic001G330925 Sobic004G138400--Sobic001G330925 Sobic004G138400--Sobic002G202800 Sobic004G138400--Sobic004G106200 Sobic004G109100 Sobic004G109100 Sobic004G138400--Sobic004G109100 Sobic004G138400--Sobic003G242800 Sobic001G321700 Sobic001G321700 Sobic004G138400--Sobic001G321700 Sobic001G476100 Sobic001G476100 Sobic004G138400--Sobic001G476100 Sobic003G258700 Sobic003G258700 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G354400 Sobic002G354400 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic009G115500 Sobic009G115500 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic001G363200 Sobic001G363200 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic010G004500--Sobic003G325100 Sobic010G004500--Sobic008G095100 Sobic010G004500--Sobic001G059300 Sobic002G070700 Sobic002G070700 Sobic010G004500--Sobic002G070700 Sobic009G092200 Sobic009G092200 Sobic010G004500--Sobic009G092200 Sobic007G072166 Sobic007G072166 Sobic010G004500--Sobic007G072166 Sobic010G004500--Sobic002G202800 Sobic003G080500 Sobic003G080500 Sobic010G004500--Sobic003G080500 Sobic004G157200 Sobic004G157200 Sobic010G004500--Sobic004G157200 Sobic002G064200--Sobic002G202800 Sobic002G064200--Sobic009G115500 Sobic010G172300 Sobic010G172300 Sobic002G064200--Sobic010G172300 Sobic002G064200--Sobic002G202700 Sobic010G225500 Sobic010G225500 Sobic002G064200--Sobic010G225500 Sobic002G130500 Sobic002G130500 Sobic002G064200--Sobic002G130500 Sobic002G173900 Sobic002G173900 Sobic002G064200--Sobic002G173900 Sobic006G007450 Sobic006G007450 Sobic002G064200--Sobic006G007450 Sobic002G064200--Sobic001G363200 Sobic008G095100--Sobic003G325100 Sobic008G095100--Sobic010G004500 Sobic008G095100--Sobic006G007450 Sobic009G173800 Sobic009G173800 Sobic008G095100--Sobic009G173800 Sobic009G082800 Sobic009G082800 Sobic008G095100--Sobic009G082800 Sobic008G095100--Sobic002G202800 Sobic008G095100--Sobic002G064200 Sobic002G174801 Sobic002G174801 Sobic008G095100--Sobic002G174801 Sobic003G401500 Sobic003G401500 Sobic008G095100--Sobic003G401500 Sobic002G025000 Sobic002G025000 Sobic009G111800--Sobic002G025000 Sobic009G111800--Sobic004G109100 Sobic009G111800--Sobic004G106200 Sobic009G111800--Sobic001G321700 Sobic005G008101 Sobic005G008101 Sobic009G111800--Sobic005G008101 Sobic007G149750 Sobic007G149750 Sobic009G111800--Sobic007G149750 Sobic010G091100 Sobic010G091100 Sobic009G111800--Sobic010G091100 Sobic003G325000 Sobic003G325000 Sobic009G111800--Sobic003G325000 Sobic009G111800--Sobic004G138400 Sobic003G242800--Sobic002G202800 Sobic003G242800--Sobic003G258700 Sobic003G242800--Sobic004G138400 Sobic003G242800--Sobic003G325100 Sobic003G242800--Sobic002G064200 Sobic005G165900 Sobic005G165900 Sobic003G242800--Sobic005G165900 Sobic004G160300 Sobic004G160300 Sobic003G242800--Sobic004G160300 Sobic003G242800--Sobic001G363200 Sobic003G242800--Sobic001G330925 Sobic004G106200--Sobic004G109100 Sobic004G106200--Sobic009G111800 Sobic002G130200 Sobic002G130200 Sobic004G106200--Sobic002G130200 Sobic004G106200--Sobic001G321700 Sobic010G065001 Sobic010G065001 Sobic004G106200--Sobic010G065001 Sobic008G108300 Sobic008G108300 Sobic004G106200--Sobic008G108300 Sobic010G254000 Sobic010G254000 Sobic004G106200--Sobic010G254000 Sobic009G148950 Sobic009G148950 Sobic004G106200--Sobic009G148950 Sobic003G169100 Sobic003G169100 Sobic004G106200--Sobic003G169100 Sobic006G030250 Sobic006G030250 Sobic001G059300--Sobic006G030250 Sobic010G127500 Sobic010G127500 Sobic001G059300--Sobic010G127500 Sobic008G091100 Sobic008G091100 Sobic001G059300--Sobic008G091100 Sobic004G087432 Sobic004G087432 Sobic001G059300--Sobic004G087432 Sobic002G373500 Sobic002G373500 Sobic001G059300--Sobic002G373500 Sobic001G317900 Sobic001G317900 Sobic001G059300--Sobic001G317900
Octagon: transcription factors


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