Gene annotation
Transcriptome id Sobic.009G111800.1
Synonym
Functional annotation OsFBO5 - F-box and other domain containing protein, expressed
UniProt A0A1B6P7U5
Pfam PF12937
Panther DB PTHR33186 PTHR33186:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G03970 : F-box associated ubiquitination effector family protein
RAP-DB (Rice) LOC_Os10g04850.1 : OsFBO5 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a036973 , Zm00025a043364
Brachypodium PNT62985
Barley -
Wheat TraesCS4B02G337800 , TraesCS4D02G333200 , TraesCS4B02G241000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G025000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor like protein kinase, putative, expressed -
2 Sobic.004G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.004G106200 receptor-like kinase, putative, expressed -
4 Sobic.001G321700 dehydration response related protein, putative, expressed -
5 Sobic.005G008101 - -
6 Sobic.007G149750 - -
7 Sobic.010G091100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 3, putative, expressed -
8 Sobic.003G325000 expressed protein -
9 Sobic.004G138400 WRKY51, expressed -
10 Sobic.002G130200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
11 Sobic.010G065001 - -
12 Sobic.004G234766 - -
13 Sobic.002G322101 - -
14 Sobic.003G290050 - -
15 Sobic.010G107601 - -
16 Sobic.001G128000 expressed protein -
17 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
18 Sobic.007G141650 - -
19 Sobic.005G096500 - -
20 Sobic.005G167100 - -


Gene co-expression network
sample Sobic009G111800 Sobic009G111800 Sobic002G025000 Sobic002G025000 Sobic009G111800--Sobic002G025000 Sobic004G109100 Sobic004G109100 Sobic009G111800--Sobic004G109100 Sobic004G106200 Sobic004G106200 Sobic009G111800--Sobic004G106200 Sobic001G321700 Sobic001G321700 Sobic009G111800--Sobic001G321700 Sobic005G008101 Sobic005G008101 Sobic009G111800--Sobic005G008101 Sobic007G149750 Sobic007G149750 Sobic009G111800--Sobic007G149750 Sobic010G091100 Sobic010G091100 Sobic009G111800--Sobic010G091100 Sobic003G325000 Sobic003G325000 Sobic009G111800--Sobic003G325000 Sobic004G138400 Sobic004G138400 Sobic009G111800--Sobic004G138400 Sobic002G025000--Sobic007G149750 Sobic002G322101 Sobic002G322101 Sobic002G025000--Sobic002G322101 Sobic004G234766 Sobic004G234766 Sobic002G025000--Sobic004G234766 Sobic010G173600 Sobic010G173600 Sobic002G025000--Sobic010G173600 Sobic006G093550 Sobic006G093550 Sobic002G025000--Sobic006G093550 Sobic003G169400 Sobic003G169400 Sobic002G025000--Sobic003G169400 Sobic001G249900 Sobic001G249900 Sobic002G025000--Sobic001G249900 Sobic006G147350 Sobic006G147350 Sobic002G025000--Sobic006G147350 Sobic003G255850 Sobic003G255850 Sobic002G025000--Sobic003G255850 Sobic004G109100--Sobic004G106200 Sobic004G109100--Sobic009G111800 Sobic010G046900 Sobic010G046900 Sobic004G109100--Sobic010G046900 Sobic004G109100--Sobic001G321700 Sobic002G130200 Sobic002G130200 Sobic004G109100--Sobic002G130200 Sobic005G060400 Sobic005G060400 Sobic004G109100--Sobic005G060400 Sobic004G109100--Sobic003G325000 Sobic004G109100--Sobic004G138400 Sobic004G109100--Sobic005G008101 Sobic004G106200--Sobic004G109100 Sobic004G106200--Sobic009G111800 Sobic004G106200--Sobic002G130200 Sobic004G106200--Sobic001G321700 Sobic010G065001 Sobic010G065001 Sobic004G106200--Sobic010G065001 Sobic008G108300 Sobic008G108300 Sobic004G106200--Sobic008G108300 Sobic010G254000 Sobic010G254000 Sobic004G106200--Sobic010G254000 Sobic009G148950 Sobic009G148950 Sobic004G106200--Sobic009G148950 Sobic003G169100 Sobic003G169100 Sobic004G106200--Sobic003G169100 Sobic001G321700--Sobic004G106200 Sobic001G321700--Sobic009G111800 Sobic001G476100 Sobic001G476100 Sobic001G321700--Sobic001G476100 Sobic001G321700--Sobic010G065001 Sobic001G321700--Sobic004G109100 Sobic001G319000 Sobic001G319000 Sobic001G321700--Sobic001G319000 Sobic008G081500 Sobic008G081500 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic004G242900 Sobic004G242900 Sobic001G321700--Sobic004G242900 Sobic004G201800 Sobic004G201800 Sobic005G008101--Sobic004G201800 Sobic003G290050 Sobic003G290050 Sobic005G008101--Sobic003G290050 Sobic006G078450 Sobic006G078450 Sobic005G008101--Sobic006G078450 Sobic003G089700 Sobic003G089700 Sobic005G008101--Sobic003G089700 Sobic005G183450 Sobic005G183450 Sobic005G008101--Sobic005G183450 Sobic006G020350 Sobic006G020350 Sobic005G008101--Sobic006G020350 Sobic006G124850 Sobic006G124850 Sobic005G008101--Sobic006G124850 Sobic008G035633 Sobic008G035633 Sobic005G008101--Sobic008G035633 Sobic006G017266 Sobic006G017266 Sobic005G008101--Sobic006G017266 Sobic007G149750--Sobic002G322101 Sobic007G149750--Sobic010G173600 Sobic007G149750--Sobic006G147350 Sobic007G149750--Sobic006G093550 Sobic007G149750--Sobic003G255850 Sobic007G149750--Sobic001G249900 Sobic007G149750--Sobic004G234766 Sobic005G093600 Sobic005G093600 Sobic007G149750--Sobic005G093600 Sobic003G128575 Sobic003G128575 Sobic007G149750--Sobic003G128575 Sobic010G091100--Sobic009G111800 Sobic010G091100--Sobic007G149750 Sobic010G091100--Sobic002G025000 Sobic005G030266 Sobic005G030266 Sobic010G091100--Sobic005G030266 Sobic005G068200 Sobic005G068200 Sobic010G091100--Sobic005G068200 Sobic010G091100--Sobic001G249900 Sobic010G091100--Sobic004G234766 Sobic010G091100--Sobic006G093550 Sobic006G130100 Sobic006G130100 Sobic010G091100--Sobic006G130100 Sobic002G341600 Sobic002G341600 Sobic003G325000--Sobic002G341600 Sobic001G217800 Sobic001G217800 Sobic003G325000--Sobic001G217800 Sobic009G104850 Sobic009G104850 Sobic003G325000--Sobic009G104850 Sobic003G249300 Sobic003G249300 Sobic003G325000--Sobic003G249300 Sobic001G302100 Sobic001G302100 Sobic003G325000--Sobic001G302100 Sobic001G519700 Sobic001G519700 Sobic003G325000--Sobic001G519700 Sobic010G225400 Sobic010G225400 Sobic003G325000--Sobic010G225400 Sobic003G160400 Sobic003G160400 Sobic003G325000--Sobic003G160400 Sobic005G167450 Sobic005G167450 Sobic003G325000--Sobic005G167450 Sobic003G325100 Sobic003G325100 Sobic004G138400--Sobic003G325100 Sobic004G138400--Sobic009G111800 Sobic001G330925 Sobic001G330925 Sobic004G138400--Sobic001G330925 Sobic002G202800 Sobic002G202800 Sobic004G138400--Sobic002G202800 Sobic004G138400--Sobic004G106200 Sobic004G138400--Sobic004G109100 Sobic003G242800 Sobic003G242800 Sobic004G138400--Sobic003G242800 Sobic004G138400--Sobic001G321700 Sobic004G138400--Sobic001G476100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.