Gene annotation
Transcriptome id Sobic.003G325000.1
Synonym Sb03g037110
Functional annotation expressed protein
UniProt A0A1W0W024
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45480 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os01g58500.1 : expressed protein
MaizeGDB (Corn) Zm00025a050327 , Zm00025a027204
Brachypodium KQK10168
Barley HORVU5Hr1G117790.4 , HORVU5Hr1G117790.3
Wheat TraesCS3D02G322200 , TraesCS3D02G322200 , TraesCS3B02G358700 , TraesCS3B02G358700 , TraesCS3A02G328600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G341600 lipase, putative, expressed -
2 Sobic.001G217800 - -
3 Sobic.009G104850 - -
4 Sobic.003G249300 expressed protein -
5 Sobic.001G302100 holliday junction resolvase, putative, expressed K07447: putative holliday junction resolvase
6 Sobic.001G519700 regulatory protein, putative, expressed -
7 Sobic.010G225400 expressed protein -
8 Sobic.003G160400 zinc knuckle family protein, expressed -
9 Sobic.005G167450 - -
10 Sobic.001G011600 glutathione S-transferase, putative, expressed -
11 Sobic.006G258600 thiol-disulphide oxidoreductase DCC, putative, expressed -
12 Sobic.004G272500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
13 Sobic.002G390200 pentatricopeptide, putative, expressed -
14 Sobic.008G140050 - -
15 Sobic.005G216900 DUF538 domain containing protein, putative, expressed -
16 Sobic.006G057100 - -
17 Sobic.003G160300 - -
18 Sobic.002G311900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.009G029100 serine/threonine-protein kinase receptor precursor, putative, expressed -
20 Sobic.005G101400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase


Gene co-expression network
sample Sobic003G325000 Sobic003G325000 Sobic002G341600 Sobic002G341600 Sobic003G325000--Sobic002G341600 Sobic001G217800 Sobic001G217800 Sobic003G325000--Sobic001G217800 Sobic009G104850 Sobic009G104850 Sobic003G325000--Sobic009G104850 Sobic003G249300 Sobic003G249300 Sobic003G325000--Sobic003G249300 Sobic001G302100 Sobic001G302100 Sobic003G325000--Sobic001G302100 Sobic001G519700 Sobic001G519700 Sobic003G325000--Sobic001G519700 Sobic010G225400 Sobic010G225400 Sobic003G325000--Sobic010G225400 Sobic003G160400 Sobic003G160400 Sobic003G325000--Sobic003G160400 Sobic005G167450 Sobic005G167450 Sobic003G325000--Sobic005G167450 Sobic002G341600--Sobic001G302100 Sobic006G258600 Sobic006G258600 Sobic002G341600--Sobic006G258600 Sobic002G341600--Sobic003G249300 Sobic002G341600--Sobic001G217800 Sobic001G540250 Sobic001G540250 Sobic002G341600--Sobic001G540250 Sobic004G125701 Sobic004G125701 Sobic002G341600--Sobic004G125701 Sobic009G029100 Sobic009G029100 Sobic002G341600--Sobic009G029100 Sobic007G099300 Sobic007G099300 Sobic002G341600--Sobic007G099300 Sobic002G341600--Sobic003G325000 Sobic005G101400 Sobic005G101400 Sobic001G217800--Sobic005G101400 Sobic001G217800--Sobic009G104850 Sobic001G217800--Sobic003G249300 Sobic001G217800--Sobic005G167450 Sobic001G217800--Sobic001G540250 Sobic004G272500 Sobic004G272500 Sobic001G217800--Sobic004G272500 Sobic001G217800--Sobic002G341600 Sobic001G217800--Sobic009G029100 Sobic001G217800--Sobic001G302100 Sobic009G104850--Sobic004G272500 Sobic009G104850--Sobic001G217800 Sobic009G104850--Sobic010G225400 Sobic009G104850--Sobic005G101400 Sobic009G104850--Sobic003G160400 Sobic005G167100 Sobic005G167100 Sobic009G104850--Sobic005G167100 Sobic009G104850--Sobic005G167450 Sobic010G107601 Sobic010G107601 Sobic009G104850--Sobic010G107601 Sobic004G234766 Sobic004G234766 Sobic009G104850--Sobic004G234766 Sobic003G249300--Sobic001G540250 Sobic003G249300--Sobic001G217800 Sobic003G249300--Sobic001G302100 Sobic003G249300--Sobic005G167450 Sobic003G249300--Sobic002G341600 Sobic003G249300--Sobic004G125701 Sobic003G249300--Sobic005G101400 Sobic004G125600 Sobic004G125600 Sobic003G249300--Sobic004G125600 Sobic003G249300--Sobic009G104850 Sobic001G302100--Sobic003G249300 Sobic001G302100--Sobic002G341600 Sobic001G302100--Sobic004G125701 Sobic001G302100--Sobic001G540250 Sobic001G302100--Sobic004G125600 Sobic001G302100--Sobic001G217800 Sobic004G019700 Sobic004G019700 Sobic001G302100--Sobic004G019700 Sobic001G302100--Sobic007G099300 Sobic001G124500 Sobic001G124500 Sobic001G302100--Sobic001G124500 Sobic001G519700--Sobic004G272500 Sobic001G519700--Sobic010G225400 Sobic007G141650 Sobic007G141650 Sobic001G519700--Sobic007G141650 Sobic005G096450 Sobic005G096450 Sobic001G519700--Sobic005G096450 Sobic010G201266 Sobic010G201266 Sobic001G519700--Sobic010G201266 Sobic005G116400 Sobic005G116400 Sobic001G519700--Sobic005G116400 Sobic002G278100 Sobic002G278100 Sobic001G519700--Sobic002G278100 Sobic001G011600 Sobic001G011600 Sobic001G519700--Sobic001G011600 Sobic001G519700--Sobic009G104850 Sobic010G225400--Sobic010G201266 Sobic010G225400--Sobic007G141650 Sobic010G225400--Sobic005G167100 Sobic010G225400--Sobic002G278100 Sobic005G096500 Sobic005G096500 Sobic010G225400--Sobic005G096500 Sobic010G225400--Sobic010G107601 Sobic008G140050 Sobic008G140050 Sobic010G225400--Sobic008G140050 Sobic003G172400 Sobic003G172400 Sobic010G225400--Sobic003G172400 Sobic010G225400--Sobic009G104850 Sobic007G085900 Sobic007G085900 Sobic003G160400--Sobic007G085900 Sobic005G216900 Sobic005G216900 Sobic003G160400--Sobic005G216900 Sobic003G160300 Sobic003G160300 Sobic003G160400--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic003G160400--Sobic003G160433 Sobic001G128000 Sobic001G128000 Sobic003G160400--Sobic001G128000 Sobic001G054050 Sobic001G054050 Sobic003G160400--Sobic001G054050 Sobic002G390200 Sobic002G390200 Sobic003G160400--Sobic002G390200 Sobic003G160400--Sobic008G140050 Sobic006G057100 Sobic006G057100 Sobic003G160400--Sobic006G057100 Sobic005G167450--Sobic001G217800 Sobic005G167450--Sobic005G101400 Sobic005G167450--Sobic009G104850 Sobic005G167450--Sobic003G249300 Sobic005G167450--Sobic004G272500 Sobic005G167450--Sobic010G225400 Sobic005G167450--Sobic004G234766 Sobic010G107901 Sobic010G107901 Sobic005G167450--Sobic010G107901 Sobic006G093550 Sobic006G093550 Sobic005G167450--Sobic006G093550
Octagon: transcription factors


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