Gene annotation
Transcriptome id Sobic.001G519700.2
Synonym Sb01g048460
Functional annotation regulatory protein, putative, expressed
UniProt A0A1Z5SBW7
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF419
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os03g03730.1 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a009026 , Zm00025a000409
Brachypodium KQK23839 , KQK23838 , PNT78264 , KQK23840
Barley HORVU4Hr1G082520.5 , HORVU4Hr1G082520.4 , HORVU4Hr1G082520.3 , HORVU4Hr1G082520.2 , HORVU4Hr1G082520.1 , HORVU3Hr1G094370.1
Wheat TraesCS2B02G074600 , TraesCS4D02G320100 , TraesCS2D02G060300 , TraesCS3D02G423700 , TraesCS5A02G495700 , TraesCS4B02G323100
Populus -


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cDNA sequences
Sobic.001G519700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G272500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
2 Sobic.010G225400 expressed protein -
3 Sobic.007G141650 - -
4 Sobic.005G096450 - -
5 Sobic.010G201266 - K05573: NAD(P)H-quinone oxidoreductase subunit 2
K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
6 Sobic.005G116400 apocytochrome f precursor, putative, expressed K02634: apocytochrome f
7 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
8 Sobic.001G011600 glutathione S-transferase, putative, expressed -
9 Sobic.009G104850 - -
10 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
11 Sobic.006G258600 thiol-disulphide oxidoreductase DCC, putative, expressed -
12 Sobic.003G369566 - -
13 Sobic.003G168200 - -
14 Sobic.005G096500 - -
15 Sobic.007G137501 - -
16 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
17 Sobic.010G107601 - -
18 Sobic.003G352000 growth regulator related protein, putative, expressed -
19 Sobic.003G171900 - -
20 Sobic.003G166400 - K02911: RP-L32, MRPL32, large subunit ribosomal protein L32


Gene co-expression network
sample Sobic001G519700 Sobic001G519700 Sobic004G272500 Sobic004G272500 Sobic001G519700--Sobic004G272500 Sobic010G225400 Sobic010G225400 Sobic001G519700--Sobic010G225400 Sobic007G141650 Sobic007G141650 Sobic001G519700--Sobic007G141650 Sobic005G096450 Sobic005G096450 Sobic001G519700--Sobic005G096450 Sobic010G201266 Sobic010G201266 Sobic001G519700--Sobic010G201266 Sobic005G116400 Sobic005G116400 Sobic001G519700--Sobic005G116400 Sobic002G278100 Sobic002G278100 Sobic001G519700--Sobic002G278100 Sobic001G011600 Sobic001G011600 Sobic001G519700--Sobic001G011600 Sobic009G104850 Sobic009G104850 Sobic001G519700--Sobic009G104850 Sobic004G272500--Sobic009G104850 Sobic008G160300 Sobic008G160300 Sobic004G272500--Sobic008G160300 Sobic010G107601 Sobic010G107601 Sobic004G272500--Sobic010G107601 Sobic004G337600 Sobic004G337600 Sobic004G272500--Sobic004G337600 Sobic003G172400 Sobic003G172400 Sobic004G272500--Sobic003G172400 Sobic005G096500 Sobic005G096500 Sobic004G272500--Sobic005G096500 Sobic003G169400 Sobic003G169400 Sobic004G272500--Sobic003G169400 Sobic003G168500 Sobic003G168500 Sobic004G272500--Sobic003G168500 Sobic003G171900 Sobic003G171900 Sobic004G272500--Sobic003G171900 Sobic010G225400--Sobic010G201266 Sobic010G225400--Sobic007G141650 Sobic005G167100 Sobic005G167100 Sobic010G225400--Sobic005G167100 Sobic010G225400--Sobic002G278100 Sobic010G225400--Sobic005G096500 Sobic010G225400--Sobic010G107601 Sobic008G140050 Sobic008G140050 Sobic010G225400--Sobic008G140050 Sobic010G225400--Sobic003G172400 Sobic010G225400--Sobic009G104850 Sobic007G141650--Sobic005G096500 Sobic007G141650--Sobic002G278100 Sobic007G141650--Sobic010G201266 Sobic007G141650--Sobic010G107601 Sobic007G141650--Sobic003G172400 Sobic007G141650--Sobic008G160300 Sobic007G141650--Sobic003G171900 Sobic007G141650--Sobic005G167100 Sobic007G201200 Sobic007G201200 Sobic007G141650--Sobic007G201200 Sobic005G096450--Sobic005G116400 Sobic007G149200 Sobic007G149200 Sobic005G096450--Sobic007G149200 Sobic007G137501 Sobic007G137501 Sobic005G096450--Sobic007G137501 Sobic005G096450--Sobic010G201266 Sobic005G096450--Sobic002G278100 Sobic005G096450--Sobic007G141650 Sobic003G168200 Sobic003G168200 Sobic005G096450--Sobic003G168200 Sobic005G096450--Sobic010G225400 Sobic003G369533 Sobic003G369533 Sobic005G096450--Sobic003G369533 Sobic010G201266--Sobic002G278100 Sobic010G201266--Sobic005G116400 Sobic010G201266--Sobic010G107601 Sobic010G201266--Sobic008G160300 Sobic010G201266--Sobic003G172400 Sobic010G201266--Sobic003G171900 Sobic010G201266--Sobic003G168200 Sobic010G201266--Sobic007G149200 Sobic010G201266--Sobic007G141650 Sobic005G116400--Sobic010G201266 Sobic005G116400--Sobic007G149200 Sobic005G116400--Sobic002G278100 Sobic005G116400--Sobic003G168200 Sobic005G116400--Sobic003G369533 SobicK029400 SobicK029400 Sobic005G116400--SobicK029400 Sobic003G352000 Sobic003G352000 Sobic005G116400--Sobic003G352000 Sobic005G116400--Sobic010G107601 Sobic005G116400--Sobic007G141650 Sobic002G278100--Sobic010G201266 Sobic002G278100--Sobic008G160300 Sobic002G278100--Sobic003G168200 Sobic002G278100--Sobic003G172400 Sobic002G278100--Sobic003G171900 Sobic002G278100--Sobic007G149200 Sobic002G278100--Sobic010G107601 Sobic002G278100--Sobic007G141650 Sobic002G278100--Sobic005G116400 Sobic001G011600--Sobic010G225400 Sobic006G130100 Sobic006G130100 Sobic001G011600--Sobic006G130100 Sobic003G218950 Sobic003G218950 Sobic001G011600--Sobic003G218950 Sobic003G369566 Sobic003G369566 Sobic001G011600--Sobic003G369566 Sobic001G011600--Sobic007G137501 Sobic001G011600--Sobic003G369533 Sobic001G011600--Sobic001G519700 Sobic001G011600--Sobic005G116400 Sobic003G050100 Sobic003G050100 Sobic001G011600--Sobic003G050100 Sobic009G104850--Sobic004G272500 Sobic001G217800 Sobic001G217800 Sobic009G104850--Sobic001G217800 Sobic009G104850--Sobic010G225400 Sobic005G101400 Sobic005G101400 Sobic009G104850--Sobic005G101400 Sobic003G160400 Sobic003G160400 Sobic009G104850--Sobic003G160400 Sobic009G104850--Sobic005G167100 Sobic005G167450 Sobic005G167450 Sobic009G104850--Sobic005G167450 Sobic009G104850--Sobic010G107601 Sobic004G234766 Sobic004G234766 Sobic009G104850--Sobic004G234766
Octagon: transcription factors


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