Gene annotation
Transcriptome id Sobic.003G352000.2,Sobic.003G352000.3
Synonym Sb03g039450
Functional annotation growth regulator related protein, putative, expressed
UniProt C5XPP3
Pfam PF10250
Panther DB PTHR31288 PTHR31288:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G01480 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os05g38490.1 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a037686 , Zm00025a043899 , Zm00025a041804 , Zm00025a014893 , Zm00025a028427 , Zm00025a026914 , Zm00025a019320
Brachypodium KQK10517
Barley HORVU3Hr1G086310.18 , HORVU3Hr1G086310.17 , HORVU3Hr1G086310.15 , HORVU3Hr1G086310.14 , HORVU3Hr1G086310.13 , HORVU3Hr1G086310.12 , HORVU3Hr1G086310.11 , HORVU3Hr1G086310.10 , HORVU1Hr1G072360.3 , HORVU1Hr1G072360.2 , HORVU1Hr1G072360.1 , HORVU1Hr1G072360.7 , HORVU1Hr1G072360.6 , HORVU1Hr1G072360.5 , HORVU1Hr1G072360.4 , HORVU1Hr1G072360.9 , HORVU3Hr1G086310.7 , HORVU3Hr1G086310.6 , HORVU3Hr1G086310.5 , HORVU3Hr1G086310.4 , HORVU3Hr1G086310.2 , HORVU3Hr1G086310.1 , HORVU3Hr1G086310.9 , HORVU3Hr1G086310.8 , HORVU1Hr1G072360.22 , HORVU1Hr1G072360.23 , HORVU1Hr1G072360.20 , HORVU1Hr1G072360.21 , HORVU1Hr1G072360.24 , HORVU1Hr1G072360.13 , HORVU1Hr1G072360.12 , HORVU1Hr1G072360.11 , HORVU1Hr1G072360.10 , HORVU1Hr1G072360.17 , HORVU1Hr1G072360.16 , HORVU1Hr1G072360.15 , HORVU1Hr1G072360.19 , HORVU1Hr1G072360.18
Wheat TraesCS3D02G353300 , TraesCS1A02G284400 , TraesCS1D02G283400 , TraesCS3A02G359000 , TraesCS3B02G391800 , TraesCS1B02G293700 , TraesCS1B02G293700
Populus -


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cDNA sequences
Sobic.003G352000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K029400 conserved hypothetical protein -
2 Sobic.003G168200 - -
3 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
4 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
5 Sobic.010G201266 - K05573: NAD(P)H-quinone oxidoreductase subunit 2
K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
6 Sobic.006G057100 - -
7 Sobic.003G172400 conserved hypothetical protein -
8 Sobic.003G369533 - -
9 Sobic.003G218950 - -
10 Sobic.004G337850 - -
11 Sobic.003G169000 - K02718: photosystem II PsbT protein
12 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
13 Sobic.005G116400 apocytochrome f precursor, putative, expressed K02634: apocytochrome f
14 Sobic.005G167100 - -
15 Sobic.003G171900 - -
16 Sobic.010G107601 - -
17 Sobic.004G087050 - -
18 Sobic.007G065000 proton-dependent oligopeptide transport, putative, expressed -
19 Sobic.007G085900 - -
20 Sobic.009G123100 - K02710: photosystem II PsbI protein
K02712: photosystem II PsbK protein


Gene co-expression network
sample Sobic003G352000 Sobic003G352000 SobicK029400 SobicK029400 Sobic003G352000--SobicK029400 Sobic003G168200 Sobic003G168200 Sobic003G352000--Sobic003G168200 Sobic007G149200 Sobic007G149200 Sobic003G352000--Sobic007G149200 Sobic002G278100 Sobic002G278100 Sobic003G352000--Sobic002G278100 Sobic010G201266 Sobic010G201266 Sobic003G352000--Sobic010G201266 Sobic006G057100 Sobic006G057100 Sobic003G352000--Sobic006G057100 Sobic003G172400 Sobic003G172400 Sobic003G352000--Sobic003G172400 Sobic003G369533 Sobic003G369533 Sobic003G352000--Sobic003G369533 Sobic003G218950 Sobic003G218950 Sobic003G352000--Sobic003G218950 SobicK029400--Sobic003G352000 SobicK029400--Sobic003G168200 SobicK029400--Sobic002G278100 SobicK029400--Sobic003G369533 SobicK029400--Sobic010G201266 SobicK029400--Sobic007G149200 SobicK029400--Sobic003G172400 Sobic005G116400 Sobic005G116400 SobicK029400--Sobic005G116400 Sobic008G160300 Sobic008G160300 SobicK029400--Sobic008G160300 Sobic003G168200--Sobic007G149200 Sobic003G168200--Sobic002G278100 Sobic003G168200--Sobic003G352000 Sobic003G168200--SobicK029400 Sobic004G087050 Sobic004G087050 Sobic003G168200--Sobic004G087050 Sobic003G168200--Sobic010G201266 Sobic010G139200 Sobic010G139200 Sobic003G168200--Sobic010G139200 Sobic003G168200--Sobic008G160300 Sobic003G171900 Sobic003G171900 Sobic003G168200--Sobic003G171900 Sobic007G149200--Sobic003G168200 Sobic007G149200--Sobic002G278100 Sobic007G149200--Sobic005G116400 Sobic007G149200--Sobic003G352000 Sobic007G149200--Sobic010G201266 Sobic007G149200--SobicK029400 Sobic007G149200--Sobic003G369533 Sobic003G169000 Sobic003G169000 Sobic007G149200--Sobic003G169000 Sobic007G149200--Sobic010G139200 Sobic002G278100--Sobic010G201266 Sobic002G278100--Sobic008G160300 Sobic002G278100--Sobic003G168200 Sobic002G278100--Sobic003G172400 Sobic002G278100--Sobic003G171900 Sobic002G278100--Sobic007G149200 Sobic010G107601 Sobic010G107601 Sobic002G278100--Sobic010G107601 Sobic007G141650 Sobic007G141650 Sobic002G278100--Sobic007G141650 Sobic002G278100--Sobic005G116400 Sobic010G201266--Sobic002G278100 Sobic010G201266--Sobic005G116400 Sobic010G201266--Sobic010G107601 Sobic010G201266--Sobic008G160300 Sobic010G201266--Sobic003G172400 Sobic010G201266--Sobic003G171900 Sobic010G201266--Sobic003G168200 Sobic010G201266--Sobic007G149200 Sobic010G201266--Sobic007G141650 Sobic006G057100--Sobic003G218950 Sobic006G057100--Sobic003G352000 Sobic007G085900 Sobic007G085900 Sobic006G057100--Sobic007G085900 Sobic006G057100--SobicK029400 Sobic006G131700 Sobic006G131700 Sobic006G057100--Sobic006G131700 Sobic003G113100 Sobic003G113100 Sobic006G057100--Sobic003G113100 Sobic006G057100--Sobic003G369533 Sobic003G160400 Sobic003G160400 Sobic006G057100--Sobic003G160400 Sobic010G185250 Sobic010G185250 Sobic006G057100--Sobic010G185250 Sobic005G167100 Sobic005G167100 Sobic003G172400--Sobic005G167100 Sobic003G172400--Sobic010G107601 Sobic003G172400--Sobic008G160300 Sobic003G172400--Sobic002G278100 Sobic003G172400--Sobic003G171900 Sobic003G172400--Sobic010G201266 Sobic005G096500 Sobic005G096500 Sobic003G172400--Sobic005G096500 Sobic003G168500 Sobic003G168500 Sobic003G172400--Sobic003G168500 Sobic003G172400--SobicK029400 Sobic003G369533--SobicK029400 Sobic003G369533--Sobic003G218950 Sobic003G369533--Sobic003G168200 Sobic003G369533--Sobic007G149200 Sobic003G369533--Sobic005G116400 Sobic007G065000 Sobic007G065000 Sobic003G369533--Sobic007G065000 Sobic003G369533--Sobic003G352000 Sobic003G369566 Sobic003G369566 Sobic003G369533--Sobic003G369566 Sobic003G369533--Sobic003G169000 Sobic003G218950--Sobic006G057100 Sobic003G218950--Sobic003G369533 Sobic003G218950--Sobic003G352000 Sobic003G218950--SobicK029400 Sobic003G218950--Sobic006G131700 Sobic002G165200 Sobic002G165200 Sobic003G218950--Sobic002G165200 Sobic003G218950--Sobic007G085900 Sobic003G218950--Sobic003G113100 Sobic003G218950--Sobic003G169000
Octagon: transcription factors


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