Gene annotation
Transcriptome id Sobic.007G065000.1,Sobic.007G065000.2
Synonym RIC7, Sb07g005150
Functional annotation proton-dependent oligopeptide transport, putative, expressed
UniProt A0A1Z5R8D5
Pfam PF00786
Panther DB PTHR23177 PTHR23177:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G28556 : PAK-box/P21-Rho-binding family protein
RAP-DB (Rice) LOC_Os01g65210.1 : proton-dependent oligopeptide transport, putative, expressed
MaizeGDB (Corn) Zm00025a054776
Brachypodium PNT66666
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G035600 - -
2 Sobic.003G169000 - K02718: photosystem II PsbT protein
3 Sobic.003G169100 photosystem II P680 chlorophyll A apoprotein, putative, expressed K02704: photosystem II CP47 chlorophyll apoprotein
4 Sobic.003G369533 - -
5 Sobic.K029400 conserved hypothetical protein -
6 Sobic.007G145801 - K02712: photosystem II PsbK protein
7 Sobic.010G206600 NADPH-dependent oxidoreductase, putative, expressed -
8 Sobic.003G352000 growth regulator related protein, putative, expressed -
9 Sobic.003G168200 - -
10 Sobic.003G172500 - -
11 Sobic.001G182900 - -
12 Sobic.009G123100 - K02710: photosystem II PsbI protein
K02712: photosystem II PsbK protein
13 Sobic.001G394532 - K02110: ATPF0C, F-type H+-transporting ATPase subunit c
14 Sobic.006G183100 RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed K10755: replication factor C subunit 2/4
15 Sobic.006G124700 chloroplast 30S ribosomal protein S8, putative, expressed K02994: RP-S8, small subunit ribosomal protein S8
16 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
17 Sobic.004G337850 - -
18 Sobic.K032300 uncharacterized protein ycf72, putative -
19 Sobic.003G218950 - -
20 Sobic.001G358366 - -


Gene co-expression network
sample Sobic007G065000 Sobic007G065000 Sobic010G035600 Sobic010G035600 Sobic007G065000--Sobic010G035600 Sobic003G169000 Sobic003G169000 Sobic007G065000--Sobic003G169000 Sobic003G169100 Sobic003G169100 Sobic007G065000--Sobic003G169100 Sobic003G369533 Sobic003G369533 Sobic007G065000--Sobic003G369533 SobicK029400 SobicK029400 Sobic007G065000--SobicK029400 Sobic007G145801 Sobic007G145801 Sobic007G065000--Sobic007G145801 Sobic010G206600 Sobic010G206600 Sobic007G065000--Sobic010G206600 Sobic003G352000 Sobic003G352000 Sobic007G065000--Sobic003G352000 Sobic003G168200 Sobic003G168200 Sobic007G065000--Sobic003G168200 Sobic010G035600--Sobic007G065000 Sobic001G182900 Sobic001G182900 Sobic010G035600--Sobic001G182900 Sobic004G337850 Sobic004G337850 Sobic010G035600--Sobic004G337850 Sobic010G185250 Sobic010G185250 Sobic010G035600--Sobic010G185250 Sobic010G035600--SobicK029400 Sobic004G019550 Sobic004G019550 Sobic010G035600--Sobic004G019550 Sobic001G476800 Sobic001G476800 Sobic010G035600--Sobic001G476800 Sobic003G172500 Sobic003G172500 Sobic010G035600--Sobic003G172500 Sobic010G035600--Sobic010G206600 Sobic003G169000--Sobic003G169100 Sobic003G169000--Sobic007G065000 Sobic007G149200 Sobic007G149200 Sobic003G169000--Sobic007G149200 Sobic003G169000--Sobic003G352000 Sobic003G169000--Sobic003G369533 Sobic003G169000--Sobic003G168200 Sobic003G169000--SobicK029400 Sobic003G169000--Sobic007G145801 Sobic003G218950 Sobic003G218950 Sobic003G169000--Sobic003G218950 Sobic003G169100--Sobic003G169000 Sobic003G169100--Sobic007G065000 Sobic003G169100--Sobic007G145801 Sobic009G123100 Sobic009G123100 Sobic003G169100--Sobic009G123100 Sobic003G169100--Sobic003G168200 SobicK032300 SobicK032300 Sobic003G169100--SobicK032300 Sobic003G169100--Sobic007G149200 Sobic003G169100--Sobic003G172500 Sobic010G139200 Sobic010G139200 Sobic003G169100--Sobic010G139200 Sobic003G369533--SobicK029400 Sobic003G369533--Sobic003G218950 Sobic003G369533--Sobic003G168200 Sobic003G369533--Sobic007G149200 Sobic005G116400 Sobic005G116400 Sobic003G369533--Sobic005G116400 Sobic003G369533--Sobic007G065000 Sobic003G369533--Sobic003G352000 Sobic003G369566 Sobic003G369566 Sobic003G369533--Sobic003G369566 Sobic003G369533--Sobic003G169000 SobicK029400--Sobic003G352000 SobicK029400--Sobic003G168200 Sobic002G278100 Sobic002G278100 SobicK029400--Sobic002G278100 SobicK029400--Sobic003G369533 Sobic010G201266 Sobic010G201266 SobicK029400--Sobic010G201266 SobicK029400--Sobic007G149200 Sobic003G172400 Sobic003G172400 SobicK029400--Sobic003G172400 SobicK029400--Sobic005G116400 Sobic008G160300 Sobic008G160300 SobicK029400--Sobic008G160300 Sobic007G145801--Sobic009G123100 Sobic007G145801--Sobic003G169100 Sobic005G139750 Sobic005G139750 Sobic007G145801--Sobic005G139750 Sobic006G124800 Sobic006G124800 Sobic007G145801--Sobic006G124800 Sobic007G145801--SobicK032300 Sobic007G145801--Sobic010G206600 Sobic006G183100 Sobic006G183100 Sobic007G145801--Sobic006G183100 Sobic009G148950 Sobic009G148950 Sobic007G145801--Sobic009G148950 Sobic006G124700 Sobic006G124700 Sobic007G145801--Sobic006G124700 Sobic001G394532 Sobic001G394532 Sobic010G206600--Sobic001G394532 Sobic001G230050 Sobic001G230050 Sobic010G206600--Sobic001G230050 Sobic003G169200 Sobic003G169200 Sobic010G206600--Sobic003G169200 Sobic010G206600--SobicK032300 Sobic010G206600--Sobic006G183100 Sobic010G206600--Sobic006G124700 Sobic010G206600--Sobic003G172500 Sobic005G139900 Sobic005G139900 Sobic010G206600--Sobic005G139900 Sobic009G174150 Sobic009G174150 Sobic010G206600--Sobic009G174150 Sobic003G352000--SobicK029400 Sobic003G352000--Sobic003G168200 Sobic003G352000--Sobic007G149200 Sobic003G352000--Sobic002G278100 Sobic003G352000--Sobic010G201266 Sobic006G057100 Sobic006G057100 Sobic003G352000--Sobic006G057100 Sobic003G352000--Sobic003G172400 Sobic003G352000--Sobic003G369533 Sobic003G352000--Sobic003G218950 Sobic003G168200--Sobic007G149200 Sobic003G168200--Sobic002G278100 Sobic003G168200--Sobic003G352000 Sobic003G168200--SobicK029400 Sobic004G087050 Sobic004G087050 Sobic003G168200--Sobic004G087050 Sobic003G168200--Sobic010G201266 Sobic003G168200--Sobic010G139200 Sobic003G168200--Sobic008G160300 Sobic003G171900 Sobic003G171900 Sobic003G168200--Sobic003G171900
Octagon: transcription factors


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