Gene annotation
Transcriptome id Sobic.K032300.1
Synonym
Functional annotation uncharacterized protein ycf72, putative
UniProt C6JSF5 , A0A109NDX4
Pfam -
Panther DB PTHR37377 PTHR37377:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g25018.1 : uncharacterized protein ycf72, putative
MaizeGDB (Corn) -
Brachypodium KQK18203 , KQJ95659 , PNT60815
Barley HORVU2Hr1G070540.1 , HORVU6Hr1G046810.1 , HORVU6Hr1G049490.1 , HORVU2Hr1G121370.1 , HORVU5Hr1G004670.1 , HORVU5Hr1G064910.1 , HORVU6Hr1G064860.1 , HORVU3Hr1G048810.1 , HORVU7Hr1G091670.1 , HORVU0Hr1G034950.1 , HORVU2Hr1G121850.1 , HORVU0Hr1G026910.1 , HORVU0Hr1G034940.1
Wheat TraesCS7D02G138400 , TraesCS4D02G044000 , TraesCS4A02G074600 , TraesCS5D02G008600 , TraesCS4A02G303800 , TraesCS2A02G242000 , TraesCS7D02G256500 , TraesCS6B02G250600 , TraesCS5D02G457900 , TraesCS5A02G421300 , TraesCS3A02G431200 , TraesCS4A02G153700 , TraesCS1D02G179600 , TraesCS4B02G159400 , TraesCSU02G186200 , TraesCSU02G170000
Populus PNS92691 , PNT12258


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G230050 - K05580: NAD(P)H-quinone oxidoreductase subunit I
2 Sobic.003G172500 - -
3 Sobic.006G124700 chloroplast 30S ribosomal protein S8, putative, expressed K02994: RP-S8, small subunit ribosomal protein S8
4 Sobic.010G206600 NADPH-dependent oxidoreductase, putative, expressed -
5 Sobic.009G123100 - K02710: photosystem II PsbI protein
K02712: photosystem II PsbK protein
6 Sobic.006G183100 RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed K10755: replication factor C subunit 2/4
7 Sobic.010G052866 - K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
8 Sobic.006G124800 - -
9 Sobic.003G169200 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
10 Sobic.010G139200 photosystem II P680 chlorophyll A apoprotein, putative, expressed -
11 Sobic.004G087050 - -
12 Sobic.003G172600 - -
13 Sobic.001G394532 - K02110: ATPF0C, F-type H+-transporting ATPase subunit c
14 Sobic.005G110493 - -
15 Sobic.004G210400 expressed protein -
16 Sobic.009G148950 - -
17 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18
18 Sobic.002G270733 - -
19 Sobic.007G145801 - K02712: photosystem II PsbK protein
20 Sobic.003G169100 photosystem II P680 chlorophyll A apoprotein, putative, expressed K02704: photosystem II CP47 chlorophyll apoprotein


Gene co-expression network
sample SobicK032300 SobicK032300 Sobic001G230050 Sobic001G230050 SobicK032300--Sobic001G230050 Sobic003G172500 Sobic003G172500 SobicK032300--Sobic003G172500 Sobic006G124700 Sobic006G124700 SobicK032300--Sobic006G124700 Sobic010G206600 Sobic010G206600 SobicK032300--Sobic010G206600 Sobic009G123100 Sobic009G123100 SobicK032300--Sobic009G123100 Sobic006G183100 Sobic006G183100 SobicK032300--Sobic006G183100 Sobic010G052866 Sobic010G052866 SobicK032300--Sobic010G052866 Sobic006G124800 Sobic006G124800 SobicK032300--Sobic006G124800 Sobic003G169200 Sobic003G169200 SobicK032300--Sobic003G169200 Sobic001G230050--SobicK032300 Sobic001G230050--Sobic003G169200 Sobic001G230050--Sobic010G206600 Sobic003G172600 Sobic003G172600 Sobic001G230050--Sobic003G172600 Sobic003G173116 Sobic003G173116 Sobic001G230050--Sobic003G173116 Sobic001G394532 Sobic001G394532 Sobic001G230050--Sobic001G394532 Sobic001G230050--Sobic006G183100 Sobic001G230050--Sobic003G172500 Sobic001G230050--Sobic006G124700 Sobic003G172500--Sobic010G052866 Sobic004G087050 Sobic004G087050 Sobic003G172500--Sobic004G087050 Sobic003G172500--Sobic009G123100 Sobic003G172500--SobicK032300 Sobic010G139200 Sobic010G139200 Sobic003G172500--Sobic010G139200 Sobic005G110493 Sobic005G110493 Sobic003G172500--Sobic005G110493 Sobic003G172500--Sobic006G124700 Sobic003G168425 Sobic003G168425 Sobic003G172500--Sobic003G168425 Sobic003G169300 Sobic003G169300 Sobic003G172500--Sobic003G169300 Sobic006G124700--SobicK032300 Sobic006G124700--Sobic003G172500 Sobic006G124700--Sobic006G183100 Sobic006G124700--Sobic009G123100 Sobic006G124700--Sobic001G230050 Sobic006G124700--Sobic010G206600 Sobic006G124700--Sobic010G052866 Sobic006G124700--Sobic004G087050 Sobic006G124700--Sobic010G139200 Sobic010G206600--Sobic001G394532 Sobic010G206600--Sobic001G230050 Sobic010G206600--Sobic003G169200 Sobic010G206600--SobicK032300 Sobic010G206600--Sobic006G183100 Sobic010G206600--Sobic006G124700 Sobic010G206600--Sobic003G172500 Sobic005G139900 Sobic005G139900 Sobic010G206600--Sobic005G139900 Sobic009G174150 Sobic009G174150 Sobic010G206600--Sobic009G174150 Sobic009G123100--Sobic003G172500 Sobic009G148950 Sobic009G148950 Sobic009G123100--Sobic009G148950 Sobic009G123100--Sobic004G087050 Sobic006G057050 Sobic006G057050 Sobic009G123100--Sobic006G057050 Sobic009G123100--SobicK032300 Sobic007G145801 Sobic007G145801 Sobic009G123100--Sobic007G145801 Sobic009G123100--Sobic006G124700 Sobic009G123100--Sobic010G139200 Sobic004G337850 Sobic004G337850 Sobic009G123100--Sobic004G337850 Sobic006G183100--SobicK032300 Sobic006G183100--Sobic006G124700 Sobic006G183100--Sobic001G230050 Sobic006G183100--Sobic010G206600 Sobic006G183100--Sobic003G172500 Sobic006G183100--Sobic009G123100 Sobic006G183100--Sobic001G394532 Sobic006G183100--Sobic006G124800 Sobic006G183100--Sobic007G145801 Sobic010G052866--Sobic003G172500 Sobic010G052866--Sobic003G169300 Sobic010G052866--Sobic005G110493 Sobic010G052866--SobicK032300 Sobic003G173266 Sobic003G173266 Sobic010G052866--Sobic003G173266 Sobic010G052866--Sobic004G087050 Sobic010G052866--Sobic003G168425 Sobic003G168800 Sobic003G168800 Sobic010G052866--Sobic003G168800 Sobic010G052866--Sobic001G230050 Sobic006G124800--Sobic003G172600 Sobic006G124800--SobicK032300 Sobic006G124800--Sobic001G230050 Sobic006G124800--Sobic007G145801 Sobic006G124800--Sobic006G183100 Sobic006G124800--Sobic009G123100 Sobic006G124800--Sobic010G206600 Sobic006G124800--Sobic006G124700 Sobic006G124800--Sobic003G169200 Sobic003G169200--Sobic001G230050 Sobic003G169200--Sobic010G206600 Sobic003G169200--Sobic003G172600 Sobic003G169200--Sobic005G139900 Sobic003G169200--SobicK032300 Sobic003G169200--Sobic001G394532 Sobic003G169200--Sobic003G173116 Sobic001G530201 Sobic001G530201 Sobic003G169200--Sobic001G530201 Sobic003G159101 Sobic003G159101 Sobic003G169200--Sobic003G159101
Octagon: transcription factors


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