Gene annotation
Transcriptome id Sobic.001G230050.1
Synonym -
Functional annotation -
UniProt A0A120GUP5 , A0A1Z5S781 , A1E9X8
Pfam PF00037
Panther DB PTHR10849
NCBI CDD -
KEGG Orthology K05580; NAD(P)H-quinone oxidoreductase subunit I
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATCG01090 : NADPH dehydrogenases
RAP-DB (Rice) LOC_Os10g21398.1 : NADPH-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK19154
Barley HORVU6Hr1G087860.1 , AGP50809 , HORVU5Hr1G064760.1 , HORVU1Hr1G048100.1 , HORVU3Hr1G066350.1 , HORVU0Hr1G025040.1 , HORVU2Hr1G021310.1 , HORVU7Hr1G107870.1
Wheat TraesCS5B02G250600
Populus PNT07248


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K032300 uncharacterized protein ycf72, putative -
2 Sobic.003G169200 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
3 Sobic.010G206600 NADPH-dependent oxidoreductase, putative, expressed -
4 Sobic.003G172600 - -
5 Sobic.003G173116 - K02724: photosystem II PsbZ protein
6 Sobic.001G394532 - K02110: ATPF0C, F-type H+-transporting ATPase subunit c
7 Sobic.006G183100 RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed K10755: replication factor C subunit 2/4
8 Sobic.003G172500 - -
9 Sobic.006G124700 chloroplast 30S ribosomal protein S8, putative, expressed K02994: RP-S8, small subunit ribosomal protein S8
10 Sobic.009G174150 - -
11 Sobic.006G124800 - -
12 Sobic.010G052866 - K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
13 Sobic.005G139900 chloroplast 30S ribosomal protein S7, putative, expressed K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
14 Sobic.003G159101 - -
15 Sobic.009G123100 - K02710: photosystem II PsbI protein
K02712: photosystem II PsbK protein
16 Sobic.003G117850 - -
17 Sobic.001G530201 - -
18 Sobic.002G270733 - -
19 Sobic.009G148950 - -
20 Sobic.005G139750 - -


Gene co-expression network
sample Sobic001G230050 Sobic001G230050 SobicK032300 SobicK032300 Sobic001G230050--SobicK032300 Sobic003G169200 Sobic003G169200 Sobic001G230050--Sobic003G169200 Sobic010G206600 Sobic010G206600 Sobic001G230050--Sobic010G206600 Sobic003G172600 Sobic003G172600 Sobic001G230050--Sobic003G172600 Sobic003G173116 Sobic003G173116 Sobic001G230050--Sobic003G173116 Sobic001G394532 Sobic001G394532 Sobic001G230050--Sobic001G394532 Sobic006G183100 Sobic006G183100 Sobic001G230050--Sobic006G183100 Sobic003G172500 Sobic003G172500 Sobic001G230050--Sobic003G172500 Sobic006G124700 Sobic006G124700 Sobic001G230050--Sobic006G124700 SobicK032300--Sobic001G230050 SobicK032300--Sobic003G172500 SobicK032300--Sobic006G124700 SobicK032300--Sobic010G206600 Sobic009G123100 Sobic009G123100 SobicK032300--Sobic009G123100 SobicK032300--Sobic006G183100 Sobic010G052866 Sobic010G052866 SobicK032300--Sobic010G052866 Sobic006G124800 Sobic006G124800 SobicK032300--Sobic006G124800 SobicK032300--Sobic003G169200 Sobic003G169200--Sobic001G230050 Sobic003G169200--Sobic010G206600 Sobic003G169200--Sobic003G172600 Sobic005G139900 Sobic005G139900 Sobic003G169200--Sobic005G139900 Sobic003G169200--SobicK032300 Sobic003G169200--Sobic001G394532 Sobic003G169200--Sobic003G173116 Sobic001G530201 Sobic001G530201 Sobic003G169200--Sobic001G530201 Sobic003G159101 Sobic003G159101 Sobic003G169200--Sobic003G159101 Sobic010G206600--Sobic001G394532 Sobic010G206600--Sobic001G230050 Sobic010G206600--Sobic003G169200 Sobic010G206600--SobicK032300 Sobic010G206600--Sobic006G183100 Sobic010G206600--Sobic006G124700 Sobic010G206600--Sobic003G172500 Sobic010G206600--Sobic005G139900 Sobic009G174150 Sobic009G174150 Sobic010G206600--Sobic009G174150 Sobic003G172600--Sobic001G230050 Sobic003G172600--Sobic006G124800 Sobic003G172600--Sobic003G169200 Sobic003G172600--SobicK032300 Sobic003G172600--Sobic003G173116 Sobic003G172600--Sobic005G139900 Sobic003G117850 Sobic003G117850 Sobic003G172600--Sobic003G117850 Sobic003G172600--Sobic010G206600 Sobic003G172600--Sobic001G530201 Sobic003G173116--Sobic003G159101 Sobic003G173116--Sobic001G230050 Sobic003G173116--Sobic005G139900 Sobic003G173116--Sobic009G174150 Sobic003G173116--Sobic003G169200 Sobic003G173116--Sobic003G172600 Sobic001G535850 Sobic001G535850 Sobic003G173116--Sobic001G535850 Sobic003G053100 Sobic003G053100 Sobic003G173116--Sobic003G053100 Sobic003G173116--Sobic010G206600 Sobic001G394532--Sobic010G206600 Sobic001G394532--Sobic001G230050 Sobic001G394532--Sobic003G169200 Sobic001G394532--SobicK032300 Sobic001G394532--Sobic001G535850 Sobic001G394532--Sobic005G139900 Sobic001G394532--Sobic001G530201 Sobic001G394532--Sobic006G183100 Sobic001G394532--Sobic009G174150 Sobic006G183100--SobicK032300 Sobic006G183100--Sobic006G124700 Sobic006G183100--Sobic001G230050 Sobic006G183100--Sobic010G206600 Sobic006G183100--Sobic003G172500 Sobic006G183100--Sobic009G123100 Sobic006G183100--Sobic001G394532 Sobic006G183100--Sobic006G124800 Sobic007G145801 Sobic007G145801 Sobic006G183100--Sobic007G145801 Sobic003G172500--Sobic010G052866 Sobic004G087050 Sobic004G087050 Sobic003G172500--Sobic004G087050 Sobic003G172500--Sobic009G123100 Sobic003G172500--SobicK032300 Sobic010G139200 Sobic010G139200 Sobic003G172500--Sobic010G139200 Sobic005G110493 Sobic005G110493 Sobic003G172500--Sobic005G110493 Sobic003G172500--Sobic006G124700 Sobic003G168425 Sobic003G168425 Sobic003G172500--Sobic003G168425 Sobic003G169300 Sobic003G169300 Sobic003G172500--Sobic003G169300 Sobic006G124700--SobicK032300 Sobic006G124700--Sobic003G172500 Sobic006G124700--Sobic006G183100 Sobic006G124700--Sobic009G123100 Sobic006G124700--Sobic001G230050 Sobic006G124700--Sobic010G206600 Sobic006G124700--Sobic010G052866 Sobic006G124700--Sobic004G087050 Sobic006G124700--Sobic010G139200
Octagon: transcription factors


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