Gene annotation
Transcriptome id Sobic.009G174150.1
Synonym -
Functional annotation -
UniProt A0A1Z5R346 , A0A109NDX0 , A1E9X5
Pfam PF00037
Panther DB PTHR24960 PTHR24960:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATCG01060 : iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding
RAP-DB (Rice) LOC_Os10g21406.1 : photosystem I iron-sulfur center, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK04459 , KQK12746
Barley HORVU1Hr1G048130.1 , HORVU5Hr1G005480.1 , HORVU5Hr1G005480.2 , HORVU0Hr1G034010.1 , HORVU0Hr1G035250.1 , AGP50806 , HORVU0Hr1G024960.1 , HORVU0Hr1G037420.1 , HORVU2Hr1G044740.1 , HORVU6Hr1G087890.1 , HORVU0Hr1G037510.1 , HORVU6Hr1G037340.1 , HORVU0Hr1G033570.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G173116 - K02724: photosystem II PsbZ protein
2 Sobic.001G230050 - K05580: NAD(P)H-quinone oxidoreductase subunit I
3 Sobic.010G206600 NADPH-dependent oxidoreductase, putative, expressed -
4 Sobic.003G169200 chloroplast ATP synthase a chain precursor, putative, expressed K02108: ATPF0A, F-type H+-transporting ATPase subunit a
5 Sobic.001G394532 - K02110: ATPF0C, F-type H+-transporting ATPase subunit c
6 Sobic.003G159101 - -
7 Sobic.010G052866 - K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
8 Sobic.001G535850 - -
9 Sobic.K032300 uncharacterized protein ycf72, putative -
10 Sobic.003G172500 - -
11 Sobic.005G139900 chloroplast 30S ribosomal protein S7, putative, expressed K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
12 Sobic.005G139750 - -
13 Sobic.001G022700 cytochrome P450, putative, expressed -
14 Sobic.006G124700 chloroplast 30S ribosomal protein S8, putative, expressed K02994: RP-S8, small subunit ribosomal protein S8
15 Sobic.003G172600 - -
16 Sobic.009G123100 - K02710: photosystem II PsbI protein
K02712: photosystem II PsbK protein
17 Sobic.009G148950 - -
18 Sobic.006G183100 RFC2 - Putative clamp loader of PCNA, replication factor C subunit 2, expressed K10755: replication factor C subunit 2/4
19 Sobic.003G117850 - -
20 Sobic.001G154000 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G174150 Sobic009G174150 Sobic003G173116 Sobic003G173116 Sobic009G174150--Sobic003G173116 Sobic001G230050 Sobic001G230050 Sobic009G174150--Sobic001G230050 Sobic010G206600 Sobic010G206600 Sobic009G174150--Sobic010G206600 Sobic003G169200 Sobic003G169200 Sobic009G174150--Sobic003G169200 Sobic001G394532 Sobic001G394532 Sobic009G174150--Sobic001G394532 Sobic003G159101 Sobic003G159101 Sobic009G174150--Sobic003G159101 Sobic010G052866 Sobic010G052866 Sobic009G174150--Sobic010G052866 Sobic001G535850 Sobic001G535850 Sobic009G174150--Sobic001G535850 SobicK032300 SobicK032300 Sobic009G174150--SobicK032300 Sobic003G173116--Sobic003G159101 Sobic003G173116--Sobic001G230050 Sobic005G139900 Sobic005G139900 Sobic003G173116--Sobic005G139900 Sobic003G173116--Sobic009G174150 Sobic003G173116--Sobic003G169200 Sobic003G172600 Sobic003G172600 Sobic003G173116--Sobic003G172600 Sobic003G173116--Sobic001G535850 Sobic003G053100 Sobic003G053100 Sobic003G173116--Sobic003G053100 Sobic003G173116--Sobic010G206600 Sobic001G230050--SobicK032300 Sobic001G230050--Sobic003G169200 Sobic001G230050--Sobic010G206600 Sobic001G230050--Sobic003G172600 Sobic001G230050--Sobic003G173116 Sobic001G230050--Sobic001G394532 Sobic006G183100 Sobic006G183100 Sobic001G230050--Sobic006G183100 Sobic003G172500 Sobic003G172500 Sobic001G230050--Sobic003G172500 Sobic006G124700 Sobic006G124700 Sobic001G230050--Sobic006G124700 Sobic010G206600--Sobic001G394532 Sobic010G206600--Sobic001G230050 Sobic010G206600--Sobic003G169200 Sobic010G206600--SobicK032300 Sobic010G206600--Sobic006G183100 Sobic010G206600--Sobic006G124700 Sobic010G206600--Sobic003G172500 Sobic010G206600--Sobic005G139900 Sobic010G206600--Sobic009G174150 Sobic003G169200--Sobic001G230050 Sobic003G169200--Sobic010G206600 Sobic003G169200--Sobic003G172600 Sobic003G169200--Sobic005G139900 Sobic003G169200--SobicK032300 Sobic003G169200--Sobic001G394532 Sobic003G169200--Sobic003G173116 Sobic001G530201 Sobic001G530201 Sobic003G169200--Sobic001G530201 Sobic003G169200--Sobic003G159101 Sobic001G394532--Sobic010G206600 Sobic001G394532--Sobic001G230050 Sobic001G394532--Sobic003G169200 Sobic001G394532--SobicK032300 Sobic001G394532--Sobic001G535850 Sobic001G394532--Sobic005G139900 Sobic001G394532--Sobic001G530201 Sobic001G394532--Sobic006G183100 Sobic001G394532--Sobic009G174150 Sobic003G159101--Sobic003G173116 Sobic005G036450 Sobic005G036450 Sobic003G159101--Sobic005G036450 Sobic003G159101--Sobic003G169200 Sobic003G159101--Sobic005G139900 Sobic004G303433 Sobic004G303433 Sobic003G159101--Sobic004G303433 Sobic003G159101--Sobic001G230050 Sobic003G159101--Sobic009G174150 Sobic003G159101--Sobic001G535850 Sobic003G159101--Sobic003G053100 Sobic010G052866--Sobic003G172500 Sobic003G169300 Sobic003G169300 Sobic010G052866--Sobic003G169300 Sobic005G110493 Sobic005G110493 Sobic010G052866--Sobic005G110493 Sobic010G052866--SobicK032300 Sobic003G173266 Sobic003G173266 Sobic010G052866--Sobic003G173266 Sobic004G087050 Sobic004G087050 Sobic010G052866--Sobic004G087050 Sobic003G168425 Sobic003G168425 Sobic010G052866--Sobic003G168425 Sobic003G168800 Sobic003G168800 Sobic010G052866--Sobic003G168800 Sobic010G052866--Sobic001G230050 Sobic003G286450 Sobic003G286450 Sobic001G535850--Sobic003G286450 Sobic001G535850--Sobic005G139900 Sobic001G535850--Sobic004G303433 Sobic001G535850--Sobic003G173116 Sobic001G535850--Sobic001G394532 Sobic001G535850--Sobic010G206600 Sobic005G139750 Sobic005G139750 Sobic001G535850--Sobic005G139750 Sobic001G154000 Sobic001G154000 Sobic001G535850--Sobic001G154000 Sobic005G104900 Sobic005G104900 Sobic001G535850--Sobic005G104900 SobicK032300--Sobic001G230050 SobicK032300--Sobic003G172500 SobicK032300--Sobic006G124700 SobicK032300--Sobic010G206600 Sobic009G123100 Sobic009G123100 SobicK032300--Sobic009G123100 SobicK032300--Sobic006G183100 SobicK032300--Sobic010G052866 Sobic006G124800 Sobic006G124800 SobicK032300--Sobic006G124800 SobicK032300--Sobic003G169200
Octagon: transcription factors


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