Gene annotation
Transcriptome id Sobic.010G201266.1
Synonym -
Functional annotation -
UniProt A0A1W0VU17 , H0I4F9 , P0CD51 , P0CD50
Pfam PF00361
Panther DB PTHR22773 PTHR22773:SF86
NCBI CDD -
KEGG Orthology K05573; NAD(P)H-quinone oxidoreductase subunit 2 K02992RP-S7, MRPS7, small subunit ribosomal protein S7
Gene Ontology -


Orthologs (automatic annotation)
TAIR ATCG01250 : NADH-Ubiquinone/plastoquinone (complex I) protein
RAP-DB (Rice) LOC_Os04g16854.1 : NADPH-dependent oxidoreductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT63674 , KQK18209 , KQK12736 , PNT65082 , KQJ96842
Barley HORVU6Hr1G046790.2 , HORVU0Hr1G025010.1 , HORVU6Hr1G049510.1 , HORVU3Hr1G076300.1 , HORVU5Hr1G032300.1 , HORVU5Hr1G032300.2 , HORVU3Hr1G033290.1 , HORVU5Hr1G064880.2 , AGP50798 , HORVU7Hr1G035490.1 , HORVU0Hr1G034720.1 , HORVU7Hr1G076960.2 , HORVU2Hr1G070520.2
Wheat TraesCS4D02G155400 , TraesCS1B02G385600 , TraesCS5D02G009000 , TraesCS6D02G158700 , TraesCS7D02G285800 , TraesCS4B02G238500 , TraesCS4D02G151600 , TraesCS5D02G457600 , TraesCS1A02G157200 , TraesCS3B02G126000 , TraesCSU02G190100 , TraesCS6A02G114300 , TraesCS1D02G179200 , TraesCS7B02G091200 , TraesCS6A02G184800 , TraesCS6B02G220100 , TraesCSU02G157100
Populus PNT44128 , PNS23300 , PNT12266 , PNT08285


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
2 Sobic.005G116400 apocytochrome f precursor, putative, expressed K02634: apocytochrome f
3 Sobic.010G107601 - -
4 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
5 Sobic.003G172400 conserved hypothetical protein -
6 Sobic.003G171900 - -
7 Sobic.003G168200 - -
8 Sobic.007G149200 "DEP1/GGC2(Ortholog in rice:Huang et al., 2009(PubMedID : 31659905)@keratin-associated protein 5-4, putative, expressed -
9 Sobic.007G141650 - -
10 Sobic.K029400 conserved hypothetical protein -
11 Sobic.005G167100 - -
12 Sobic.003G352000 growth regulator related protein, putative, expressed -
13 Sobic.005G096500 - -
14 Sobic.003G369533 - -
15 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
16 Sobic.004G087050 - -
17 Sobic.010G139200 photosystem II P680 chlorophyll A apoprotein, putative, expressed -
18 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18
19 Sobic.010G225400 expressed protein -
20 Sobic.007G201200 thaumatin, putative, expressed -


Gene co-expression network
sample Sobic010G201266 Sobic010G201266 Sobic002G278100 Sobic002G278100 Sobic010G201266--Sobic002G278100 Sobic005G116400 Sobic005G116400 Sobic010G201266--Sobic005G116400 Sobic010G107601 Sobic010G107601 Sobic010G201266--Sobic010G107601 Sobic008G160300 Sobic008G160300 Sobic010G201266--Sobic008G160300 Sobic003G172400 Sobic003G172400 Sobic010G201266--Sobic003G172400 Sobic003G171900 Sobic003G171900 Sobic010G201266--Sobic003G171900 Sobic003G168200 Sobic003G168200 Sobic010G201266--Sobic003G168200 Sobic007G149200 Sobic007G149200 Sobic010G201266--Sobic007G149200 Sobic007G141650 Sobic007G141650 Sobic010G201266--Sobic007G141650 Sobic002G278100--Sobic010G201266 Sobic002G278100--Sobic008G160300 Sobic002G278100--Sobic003G168200 Sobic002G278100--Sobic003G172400 Sobic002G278100--Sobic003G171900 Sobic002G278100--Sobic007G149200 Sobic002G278100--Sobic010G107601 Sobic002G278100--Sobic007G141650 Sobic002G278100--Sobic005G116400 Sobic005G116400--Sobic010G201266 Sobic005G116400--Sobic007G149200 Sobic005G116400--Sobic002G278100 Sobic005G116400--Sobic003G168200 Sobic003G369533 Sobic003G369533 Sobic005G116400--Sobic003G369533 SobicK029400 SobicK029400 Sobic005G116400--SobicK029400 Sobic003G352000 Sobic003G352000 Sobic005G116400--Sobic003G352000 Sobic005G116400--Sobic010G107601 Sobic005G116400--Sobic007G141650 Sobic010G107601--Sobic003G172400 Sobic005G167100 Sobic005G167100 Sobic010G107601--Sobic005G167100 Sobic010G107601--Sobic008G160300 Sobic010G107601--Sobic010G201266 Sobic010G107601--Sobic003G171900 Sobic010G107601--Sobic002G278100 Sobic003G169400 Sobic003G169400 Sobic010G107601--Sobic003G169400 Sobic005G096500 Sobic005G096500 Sobic010G107601--Sobic005G096500 Sobic003G168500 Sobic003G168500 Sobic010G107601--Sobic003G168500 Sobic008G160300--Sobic003G171900 Sobic008G160300--Sobic003G172400 Sobic008G160300--Sobic003G168500 Sobic008G160300--Sobic002G278100 Sobic008G160300--Sobic010G107601 Sobic008G160300--Sobic010G201266 Sobic003G168425 Sobic003G168425 Sobic008G160300--Sobic003G168425 Sobic008G160300--Sobic003G168200 Sobic008G160300--Sobic005G167100 Sobic003G172400--Sobic005G167100 Sobic003G172400--Sobic010G107601 Sobic003G172400--Sobic008G160300 Sobic003G172400--Sobic002G278100 Sobic003G172400--Sobic003G171900 Sobic003G172400--Sobic010G201266 Sobic003G172400--Sobic005G096500 Sobic003G172400--Sobic003G168500 Sobic003G172400--SobicK029400 Sobic003G171900--Sobic008G160300 Sobic003G171900--Sobic003G168500 Sobic003G171900--Sobic003G172400 Sobic003G171900--Sobic002G278100 Sobic003G171900--Sobic010G201266 Sobic003G171900--Sobic010G107601 Sobic003G171900--Sobic003G168425 Sobic004G087050 Sobic004G087050 Sobic003G171900--Sobic004G087050 Sobic003G171900--Sobic003G168200 Sobic003G168200--Sobic007G149200 Sobic003G168200--Sobic002G278100 Sobic003G168200--Sobic003G352000 Sobic003G168200--SobicK029400 Sobic003G168200--Sobic004G087050 Sobic003G168200--Sobic010G201266 Sobic010G139200 Sobic010G139200 Sobic003G168200--Sobic010G139200 Sobic003G168200--Sobic008G160300 Sobic003G168200--Sobic003G171900 Sobic007G149200--Sobic003G168200 Sobic007G149200--Sobic002G278100 Sobic007G149200--Sobic005G116400 Sobic007G149200--Sobic003G352000 Sobic007G149200--Sobic010G201266 Sobic007G149200--SobicK029400 Sobic007G149200--Sobic003G369533 Sobic003G169000 Sobic003G169000 Sobic007G149200--Sobic003G169000 Sobic007G149200--Sobic010G139200 Sobic007G141650--Sobic005G096500 Sobic007G141650--Sobic002G278100 Sobic007G141650--Sobic010G201266 Sobic007G141650--Sobic010G107601 Sobic007G141650--Sobic003G172400 Sobic007G141650--Sobic008G160300 Sobic007G141650--Sobic003G171900 Sobic007G141650--Sobic005G167100 Sobic007G201200 Sobic007G201200 Sobic007G141650--Sobic007G201200
Octagon: transcription factors


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