Gene annotation
Transcriptome id Sobic.007G201200.1
Synonym Sb07g026880
Functional annotation thaumatin, putative, expressed
UniProt C5YI96
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24620 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os09g32280.1 : thaumatin, putative, expressed
MaizeGDB (Corn) Zm00025a030353 , Zm00025a014262
Brachypodium PNT62219 , PNT62218 , PNT62217 , PNT62216 , KQJ85471 , PNT64873 , KQK22607 , KQJ91229
Barley HORVU4Hr1G066130.4 , HORVU5Hr1G074940.3 , HORVU5Hr1G074940.2 , HORVU7Hr1G052490.3
Wheat TraesCS7A02G253800 , TraesCS7A02G253800 , TraesCS7D02G517200 , TraesCS4D02G238200 , TraesCS7D02G252400 , TraesCS7B02G150100 , TraesCS7A02G529500 , TraesCS5D02G283400 , TraesCS4B02G236700 , TraesCS7D02G517300 , TraesCS4A02G061200 , TraesCS7B02G446200 , TraesCS7B02G446200 , TraesCS5D02G283400 , TraesCS5B02G275400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
2 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
3 Sobic.005G096500 - -
4 Sobic.010G107601 - -
5 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
6 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
7 Sobic.003G171900 - -
8 Sobic.007G141650 - -
9 Sobic.003G172400 conserved hypothetical protein -
10 Sobic.010G201266 - K05573: NAD(P)H-quinone oxidoreductase subunit 2
K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
11 Sobic.005G167100 - -
12 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
13 Sobic.002G149966 - -
14 Sobic.003G172850 - K03043: DNA-directed RNA polymerase subunit beta
15 Sobic.006G124850 - K02948: RP-S11, MRPS11, small subunit ribosomal protein S11
16 Sobic.010G132200 inhibitor I family protein, putative, expressed -
17 Sobic.003G290050 - -
18 Sobic.004G337600 - -
19 Sobic.004G272500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
20 Sobic.003G168425 - K02963: RP-S18, MRPS18, small subunit ribosomal protein S18


Gene co-expression network
sample Sobic007G201200 Sobic007G201200 Sobic003G169400 Sobic003G169400 Sobic007G201200--Sobic003G169400 Sobic003G168500 Sobic003G168500 Sobic007G201200--Sobic003G168500 Sobic005G096500 Sobic005G096500 Sobic007G201200--Sobic005G096500 Sobic010G107601 Sobic010G107601 Sobic007G201200--Sobic010G107601 Sobic002G044500 Sobic002G044500 Sobic007G201200--Sobic002G044500 Sobic008G160300 Sobic008G160300 Sobic007G201200--Sobic008G160300 Sobic003G171900 Sobic003G171900 Sobic007G201200--Sobic003G171900 Sobic007G141650 Sobic007G141650 Sobic007G201200--Sobic007G141650 Sobic003G172400 Sobic003G172400 Sobic007G201200--Sobic003G172400 Sobic003G169400--Sobic003G168500 Sobic003G169400--Sobic002G044500 Sobic003G169400--Sobic010G107601 Sobic006G124850 Sobic006G124850 Sobic003G169400--Sobic006G124850 Sobic003G169400--Sobic007G201200 Sobic003G169400--Sobic005G096500 Sobic003G169400--Sobic003G172400 Sobic005G167100 Sobic005G167100 Sobic003G169400--Sobic005G167100 Sobic002G149966 Sobic002G149966 Sobic003G169400--Sobic002G149966 Sobic003G168500--Sobic002G044500 Sobic003G168500--Sobic003G171900 Sobic003G168500--Sobic008G160300 Sobic003G172850 Sobic003G172850 Sobic003G168500--Sobic003G172850 Sobic003G168500--Sobic003G169400 Sobic004G337600 Sobic004G337600 Sobic003G168500--Sobic004G337600 Sobic003G168500--Sobic003G172400 Sobic003G168500--Sobic010G107601 Sobic003G169300 Sobic003G169300 Sobic003G168500--Sobic003G169300 Sobic005G096500--Sobic007G141650 Sobic005G096500--Sobic003G172400 Sobic005G096500--Sobic010G107601 Sobic005G096500--Sobic005G167100 Sobic005G096500--Sobic003G169400 Sobic002G278100 Sobic002G278100 Sobic005G096500--Sobic002G278100 Sobic010G201266 Sobic010G201266 Sobic005G096500--Sobic010G201266 Sobic005G096500--Sobic008G160300 Sobic005G096500--Sobic007G201200 Sobic010G107601--Sobic003G172400 Sobic010G107601--Sobic005G167100 Sobic010G107601--Sobic008G160300 Sobic010G107601--Sobic010G201266 Sobic010G107601--Sobic003G171900 Sobic010G107601--Sobic002G278100 Sobic010G107601--Sobic003G169400 Sobic010G107601--Sobic005G096500 Sobic010G107601--Sobic003G168500 Sobic002G044500--Sobic003G168500 Sobic002G044500--Sobic002G149966 Sobic002G044500--Sobic003G169400 Sobic002G150032 Sobic002G150032 Sobic002G044500--Sobic002G150032 Sobic002G044500--Sobic004G337600 Sobic002G044500--Sobic003G172850 Sobic003G172900 Sobic003G172900 Sobic002G044500--Sobic003G172900 Sobic002G044500--Sobic006G124850 Sobic001G266000 Sobic001G266000 Sobic002G044500--Sobic001G266000 Sobic008G160300--Sobic003G171900 Sobic008G160300--Sobic003G172400 Sobic008G160300--Sobic003G168500 Sobic008G160300--Sobic002G278100 Sobic008G160300--Sobic010G107601 Sobic008G160300--Sobic010G201266 Sobic003G168425 Sobic003G168425 Sobic008G160300--Sobic003G168425 Sobic003G168200 Sobic003G168200 Sobic008G160300--Sobic003G168200 Sobic008G160300--Sobic005G167100 Sobic003G171900--Sobic008G160300 Sobic003G171900--Sobic003G168500 Sobic003G171900--Sobic003G172400 Sobic003G171900--Sobic002G278100 Sobic003G171900--Sobic010G201266 Sobic003G171900--Sobic010G107601 Sobic003G171900--Sobic003G168425 Sobic004G087050 Sobic004G087050 Sobic003G171900--Sobic004G087050 Sobic003G171900--Sobic003G168200 Sobic007G141650--Sobic005G096500 Sobic007G141650--Sobic002G278100 Sobic007G141650--Sobic010G201266 Sobic007G141650--Sobic010G107601 Sobic007G141650--Sobic003G172400 Sobic007G141650--Sobic008G160300 Sobic007G141650--Sobic003G171900 Sobic007G141650--Sobic005G167100 Sobic007G141650--Sobic007G201200 Sobic003G172400--Sobic005G167100 Sobic003G172400--Sobic010G107601 Sobic003G172400--Sobic008G160300 Sobic003G172400--Sobic002G278100 Sobic003G172400--Sobic003G171900 Sobic003G172400--Sobic010G201266 Sobic003G172400--Sobic005G096500 Sobic003G172400--Sobic003G168500 SobicK029400 SobicK029400 Sobic003G172400--SobicK029400
Octagon: transcription factors


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