Gene annotation
Transcriptome id Sobic.004G272500.1
Synonym Sb04g030990
Functional annotation ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
UniProt A0A1Z5RPD7
Pfam PF11955
Panther DB PTHR31476 PTHR31476:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31290 : Ubiquitin carboxyl-terminal hydrolase family protein
RAP-DB (Rice) LOC_Os06g15550.1 : ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
MaizeGDB (Corn) Zm00025a032403
Brachypodium -
Barley HORVU7Hr1G042220.3 , HORVU7Hr1G042220.2 , HORVU7Hr1G042220.1 , HORVU7Hr1G042220.7 , HORVU7Hr1G042220.6 , HORVU7Hr1G042220.5 , HORVU7Hr1G042220.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G104850 - -
2 Sobic.008G160300 NADPH-dependent oxidoreductase, putative K05576: NAD(P)H-quinone oxidoreductase subunit 4L
3 Sobic.010G107601 - -
4 Sobic.004G337600 - -
5 Sobic.003G172400 conserved hypothetical protein -
6 Sobic.005G096500 - -
7 Sobic.003G169400 DNA-directed RNA polymerase subunit beta, putative, expressed K03046: DNA-directed RNA polymerase subunit beta'
8 Sobic.003G168500 chloroplast 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
9 Sobic.003G171900 - -
10 Sobic.005G167100 - -
11 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
12 Sobic.002G044500 chloroplast 30S ribosomal protein S16, putative, expressed K02959: RP-S16, MRPS16, small subunit ribosomal protein S16
13 Sobic.010G201266 - K05573: NAD(P)H-quinone oxidoreductase subunit 2
K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
14 Sobic.007G141650 - -
15 Sobic.010G225400 expressed protein -
16 Sobic.001G519700 regulatory protein, putative, expressed -
17 Sobic.007G201200 thaumatin, putative, expressed -
18 Sobic.003G166400 - K02911: RP-L32, MRPL32, large subunit ribosomal protein L32
19 Sobic.005G101400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
20 Sobic.003G168200 - -


Gene co-expression network
sample Sobic004G272500 Sobic004G272500 Sobic009G104850 Sobic009G104850 Sobic004G272500--Sobic009G104850 Sobic008G160300 Sobic008G160300 Sobic004G272500--Sobic008G160300 Sobic010G107601 Sobic010G107601 Sobic004G272500--Sobic010G107601 Sobic004G337600 Sobic004G337600 Sobic004G272500--Sobic004G337600 Sobic003G172400 Sobic003G172400 Sobic004G272500--Sobic003G172400 Sobic005G096500 Sobic005G096500 Sobic004G272500--Sobic005G096500 Sobic003G169400 Sobic003G169400 Sobic004G272500--Sobic003G169400 Sobic003G168500 Sobic003G168500 Sobic004G272500--Sobic003G168500 Sobic003G171900 Sobic003G171900 Sobic004G272500--Sobic003G171900 Sobic009G104850--Sobic004G272500 Sobic001G217800 Sobic001G217800 Sobic009G104850--Sobic001G217800 Sobic010G225400 Sobic010G225400 Sobic009G104850--Sobic010G225400 Sobic005G101400 Sobic005G101400 Sobic009G104850--Sobic005G101400 Sobic003G160400 Sobic003G160400 Sobic009G104850--Sobic003G160400 Sobic005G167100 Sobic005G167100 Sobic009G104850--Sobic005G167100 Sobic005G167450 Sobic005G167450 Sobic009G104850--Sobic005G167450 Sobic009G104850--Sobic010G107601 Sobic004G234766 Sobic004G234766 Sobic009G104850--Sobic004G234766 Sobic008G160300--Sobic003G171900 Sobic008G160300--Sobic003G172400 Sobic008G160300--Sobic003G168500 Sobic002G278100 Sobic002G278100 Sobic008G160300--Sobic002G278100 Sobic008G160300--Sobic010G107601 Sobic010G201266 Sobic010G201266 Sobic008G160300--Sobic010G201266 Sobic003G168425 Sobic003G168425 Sobic008G160300--Sobic003G168425 Sobic003G168200 Sobic003G168200 Sobic008G160300--Sobic003G168200 Sobic008G160300--Sobic005G167100 Sobic010G107601--Sobic003G172400 Sobic010G107601--Sobic005G167100 Sobic010G107601--Sobic008G160300 Sobic010G107601--Sobic010G201266 Sobic010G107601--Sobic003G171900 Sobic010G107601--Sobic002G278100 Sobic010G107601--Sobic003G169400 Sobic010G107601--Sobic005G096500 Sobic010G107601--Sobic003G168500 Sobic004G337600--Sobic003G168500 Sobic002G044500 Sobic002G044500 Sobic004G337600--Sobic002G044500 Sobic004G337600--Sobic008G160300 Sobic004G251400 Sobic004G251400 Sobic004G337600--Sobic004G251400 Sobic004G337600--Sobic003G171900 Sobic003G172900 Sobic003G172900 Sobic004G337600--Sobic003G172900 Sobic003G169300 Sobic003G169300 Sobic004G337600--Sobic003G169300 Sobic003G172850 Sobic003G172850 Sobic004G337600--Sobic003G172850 Sobic005G110493 Sobic005G110493 Sobic004G337600--Sobic005G110493 Sobic003G172400--Sobic005G167100 Sobic003G172400--Sobic010G107601 Sobic003G172400--Sobic008G160300 Sobic003G172400--Sobic002G278100 Sobic003G172400--Sobic003G171900 Sobic003G172400--Sobic010G201266 Sobic003G172400--Sobic005G096500 Sobic003G172400--Sobic003G168500 SobicK029400 SobicK029400 Sobic003G172400--SobicK029400 Sobic007G141650 Sobic007G141650 Sobic005G096500--Sobic007G141650 Sobic005G096500--Sobic003G172400 Sobic005G096500--Sobic010G107601 Sobic005G096500--Sobic005G167100 Sobic005G096500--Sobic003G169400 Sobic005G096500--Sobic002G278100 Sobic005G096500--Sobic010G201266 Sobic005G096500--Sobic008G160300 Sobic007G201200 Sobic007G201200 Sobic005G096500--Sobic007G201200 Sobic003G169400--Sobic003G168500 Sobic003G169400--Sobic002G044500 Sobic003G169400--Sobic010G107601 Sobic006G124850 Sobic006G124850 Sobic003G169400--Sobic006G124850 Sobic003G169400--Sobic007G201200 Sobic003G169400--Sobic005G096500 Sobic003G169400--Sobic003G172400 Sobic003G169400--Sobic005G167100 Sobic002G149966 Sobic002G149966 Sobic003G169400--Sobic002G149966 Sobic003G168500--Sobic002G044500 Sobic003G168500--Sobic003G171900 Sobic003G168500--Sobic008G160300 Sobic003G168500--Sobic003G172850 Sobic003G168500--Sobic003G169400 Sobic003G168500--Sobic004G337600 Sobic003G168500--Sobic003G172400 Sobic003G168500--Sobic010G107601 Sobic003G168500--Sobic003G169300 Sobic003G171900--Sobic008G160300 Sobic003G171900--Sobic003G168500 Sobic003G171900--Sobic003G172400 Sobic003G171900--Sobic002G278100 Sobic003G171900--Sobic010G201266 Sobic003G171900--Sobic010G107601 Sobic003G171900--Sobic003G168425 Sobic004G087050 Sobic004G087050 Sobic003G171900--Sobic004G087050 Sobic003G171900--Sobic003G168200
Octagon: transcription factors


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