Gene annotation
Transcriptome id Sobic.008G140050.1
Synonym -
Functional annotation -
UniProt C6JSB6 , C6JRW1 , C6JSD1 , C6JRY6 , C6JSE8 , A0A1Z5R6Q8 , C6JSR6
Pfam PF13966
Panther DB PTHR25952 PTHR25952:SF206
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G04650 : RNA-directed DNA polymerase (reverse transcriptase)-related family protein
RAP-DB (Rice) LOC_Os08g24190.1 : OsFBX286 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G085900 - -
2 Sobic.003G160300 - -
3 Sobic.003G160400 zinc knuckle family protein, expressed -
4 Sobic.005G167100 - -
5 Sobic.003G352000 growth regulator related protein, putative, expressed -
6 Sobic.010G225400 expressed protein -
7 Sobic.002G390200 pentatricopeptide, putative, expressed -
8 Sobic.K029400 conserved hypothetical protein -
9 Sobic.009G192200 outer membrane protein, OMP85 family, putative, expressed -
10 Sobic.006G057100 - -
11 Sobic.001G054050 - -
12 Sobic.003G160433 - -
13 Sobic.003G172400 conserved hypothetical protein -
14 Sobic.003G113100 OsFBX320 - F-box domain containing protein, expressed -
15 Sobic.002G278100 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.003G218950 - -
17 Sobic.010G201266 - K05573: NAD(P)H-quinone oxidoreductase subunit 2
K02992: RP-S7, MRPS7, small subunit ribosomal protein S7
18 Sobic.010G107601 - -
19 Sobic.004G282933 - -
20 Sobic.001G128000 expressed protein -


Gene co-expression network
sample Sobic008G140050 Sobic008G140050 Sobic007G085900 Sobic007G085900 Sobic008G140050--Sobic007G085900 Sobic003G160300 Sobic003G160300 Sobic008G140050--Sobic003G160300 Sobic003G160400 Sobic003G160400 Sobic008G140050--Sobic003G160400 Sobic005G167100 Sobic005G167100 Sobic008G140050--Sobic005G167100 Sobic003G352000 Sobic003G352000 Sobic008G140050--Sobic003G352000 Sobic010G225400 Sobic010G225400 Sobic008G140050--Sobic010G225400 Sobic002G390200 Sobic002G390200 Sobic008G140050--Sobic002G390200 SobicK029400 SobicK029400 Sobic008G140050--SobicK029400 Sobic009G192200 Sobic009G192200 Sobic008G140050--Sobic009G192200 Sobic007G085900--Sobic003G160300 Sobic003G160433 Sobic003G160433 Sobic007G085900--Sobic003G160433 Sobic007G085900--Sobic009G192200 Sobic007G085900--Sobic003G160400 Sobic007G085900--Sobic008G140050 Sobic006G057100 Sobic006G057100 Sobic007G085900--Sobic006G057100 Sobic001G128000 Sobic001G128000 Sobic007G085900--Sobic001G128000 Sobic007G085900--Sobic002G390200 Sobic001G054050 Sobic001G054050 Sobic007G085900--Sobic001G054050 Sobic003G160300--Sobic003G160433 Sobic003G160300--Sobic002G390200 Sobic003G160300--Sobic007G085900 Sobic003G160300--Sobic003G160400 Sobic003G160300--Sobic008G140050 Sobic005G216900 Sobic005G216900 Sobic003G160300--Sobic005G216900 Sobic003G160300--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic003G160300--Sobic002G180732 Sobic003G160300--Sobic001G054050 Sobic003G160400--Sobic007G085900 Sobic003G160400--Sobic005G216900 Sobic003G160400--Sobic003G160300 Sobic003G160400--Sobic003G160433 Sobic003G160400--Sobic001G128000 Sobic003G160400--Sobic001G054050 Sobic003G160400--Sobic002G390200 Sobic003G160400--Sobic008G140050 Sobic003G160400--Sobic006G057100 Sobic003G172400 Sobic003G172400 Sobic005G167100--Sobic003G172400 Sobic010G107601 Sobic010G107601 Sobic005G167100--Sobic010G107601 Sobic005G096500 Sobic005G096500 Sobic005G167100--Sobic005G096500 Sobic008G160300 Sobic008G160300 Sobic005G167100--Sobic008G160300 Sobic010G201266 Sobic010G201266 Sobic005G167100--Sobic010G201266 Sobic002G278100 Sobic002G278100 Sobic005G167100--Sobic002G278100 Sobic003G169400 Sobic003G169400 Sobic005G167100--Sobic003G169400 Sobic003G171900 Sobic003G171900 Sobic005G167100--Sobic003G171900 Sobic005G167100--SobicK029400 Sobic003G352000--SobicK029400 Sobic003G168200 Sobic003G168200 Sobic003G352000--Sobic003G168200 Sobic007G149200 Sobic007G149200 Sobic003G352000--Sobic007G149200 Sobic003G352000--Sobic002G278100 Sobic003G352000--Sobic010G201266 Sobic003G352000--Sobic006G057100 Sobic003G352000--Sobic003G172400 Sobic003G369533 Sobic003G369533 Sobic003G352000--Sobic003G369533 Sobic003G218950 Sobic003G218950 Sobic003G352000--Sobic003G218950 Sobic010G225400--Sobic010G201266 Sobic007G141650 Sobic007G141650 Sobic010G225400--Sobic007G141650 Sobic010G225400--Sobic005G167100 Sobic010G225400--Sobic002G278100 Sobic010G225400--Sobic005G096500 Sobic010G225400--Sobic010G107601 Sobic010G225400--Sobic008G140050 Sobic010G225400--Sobic003G172400 Sobic009G104850 Sobic009G104850 Sobic010G225400--Sobic009G104850 Sobic002G390200--Sobic003G160300 Sobic002G390200--Sobic003G160433 Sobic002G390200--Sobic002G180732 Sobic002G390200--Sobic007G085900 Sobic002G390200--Sobic003G160400 Sobic006G139200 Sobic006G139200 Sobic002G390200--Sobic006G139200 Sobic002G390200--Sobic008G140050 Sobic002G040550 Sobic002G040550 Sobic002G390200--Sobic002G040550 Sobic003G172450 Sobic003G172450 Sobic002G390200--Sobic003G172450 SobicK029400--Sobic003G352000 SobicK029400--Sobic003G168200 SobicK029400--Sobic002G278100 SobicK029400--Sobic003G369533 SobicK029400--Sobic010G201266 SobicK029400--Sobic007G149200 SobicK029400--Sobic003G172400 Sobic005G116400 Sobic005G116400 SobicK029400--Sobic005G116400 SobicK029400--Sobic008G160300 Sobic009G192200--Sobic007G085900 Sobic009G192200--Sobic006G057100 Sobic009G192200--Sobic003G160300 Sobic004G282933 Sobic004G282933 Sobic009G192200--Sobic004G282933 Sobic009G192200--Sobic008G140050 Sobic009G192200--Sobic003G218950 Sobic009G192200--Sobic003G160433 Sobic006G131700 Sobic006G131700 Sobic009G192200--Sobic006G131700 Sobic009G192200--Sobic003G352000
Octagon: transcription factors


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