Gene annotation
Transcriptome id Sobic.009G192200.4,Sobic.009G192200.1,Sobic.009G192200.3,Sobic.009G192200.2
Synonym Sb09g025100
Functional annotation outer membrane protein, OMP85 family, putative, expressed
UniProt C5Z0R7 , A0A1Z5R3B5 , A0A1Z5R4I4 , A0A1Z5R4B8
Pfam PF01103
Panther DB PTHR12815:SF10 PTHR12815 PTHR12815 PTHR12815:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G44160 : Outer membrane OMP85 family protein
RAP-DB (Rice) LOC_Os05g43470.1 : outer membrane protein, OMP85 family, putative, expressed
MaizeGDB (Corn) Zm00025a044185
Brachypodium KQK05486 , KQK05484 , KQK05485 , KQK05483
Barley HORVU1Hr1G077770.18 , HORVU1Hr1G077770.31 , HORVU1Hr1G077770.30 , HORVU1Hr1G077770.19 , HORVU1Hr1G077770.22 , HORVU1Hr1G077770.23 , HORVU1Hr1G077770.20 , HORVU1Hr1G077770.21 , HORVU1Hr1G077770.26 , HORVU1Hr1G077770.27 , HORVU1Hr1G077770.24 , HORVU1Hr1G077770.25 , HORVU1Hr1G077770.28 , HORVU1Hr1G077770.7 , HORVU1Hr1G077770.5 , HORVU1Hr1G077770.4 , HORVU1Hr1G077770.13 , HORVU1Hr1G077770.12 , HORVU1Hr1G077770.11 , HORVU1Hr1G077770.10 , HORVU1Hr1G077770.16 , HORVU1Hr1G077770.15 , HORVU1Hr1G077770.14 , HORVU1Hr1G077770.9 , HORVU1Hr1G077770.8 , HORVU1Hr1G077770.3 , HORVU1Hr1G077770.2 , HORVU1Hr1G077770.1 , HORVU1Hr1G077770.6
Wheat TraesCS1D02G330700 , TraesCS1D02G330700 , TraesCS1D02G330700 , TraesCS1B02G342000 , TraesCS1B02G342000 , TraesCS1A02G328200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G085900 - -
2 Sobic.006G057100 - -
3 Sobic.003G160300 - -
4 Sobic.004G282933 - -
5 Sobic.008G140050 - -
6 Sobic.003G218950 - -
7 Sobic.003G160433 - -
8 Sobic.006G131700 CRS1/YhbY domain containing protein, putative, expressed -
9 Sobic.003G352000 growth regulator related protein, putative, expressed -
10 Sobic.001G054050 - -
11 Sobic.003G160400 zinc knuckle family protein, expressed -
12 Sobic.003G113100 OsFBX320 - F-box domain containing protein, expressed -
13 Sobic.002G390200 pentatricopeptide, putative, expressed -
14 Sobic.K029400 conserved hypothetical protein -
15 Sobic.005G216900 DUF538 domain containing protein, putative, expressed -
16 Sobic.004G104200 berberine and berberine like domain containing protein, expressed -
17 Sobic.003G050100 polygalacturonase, putative, expressed -
18 Sobic.001G128000 expressed protein -
19 Sobic.005G028500 expressed protein -
20 Sobic.001G331650 - -


Gene co-expression network
sample Sobic009G192200 Sobic009G192200 Sobic007G085900 Sobic007G085900 Sobic009G192200--Sobic007G085900 Sobic006G057100 Sobic006G057100 Sobic009G192200--Sobic006G057100 Sobic003G160300 Sobic003G160300 Sobic009G192200--Sobic003G160300 Sobic004G282933 Sobic004G282933 Sobic009G192200--Sobic004G282933 Sobic008G140050 Sobic008G140050 Sobic009G192200--Sobic008G140050 Sobic003G218950 Sobic003G218950 Sobic009G192200--Sobic003G218950 Sobic003G160433 Sobic003G160433 Sobic009G192200--Sobic003G160433 Sobic006G131700 Sobic006G131700 Sobic009G192200--Sobic006G131700 Sobic003G352000 Sobic003G352000 Sobic009G192200--Sobic003G352000 Sobic007G085900--Sobic003G160300 Sobic007G085900--Sobic003G160433 Sobic007G085900--Sobic009G192200 Sobic003G160400 Sobic003G160400 Sobic007G085900--Sobic003G160400 Sobic007G085900--Sobic008G140050 Sobic007G085900--Sobic006G057100 Sobic001G128000 Sobic001G128000 Sobic007G085900--Sobic001G128000 Sobic002G390200 Sobic002G390200 Sobic007G085900--Sobic002G390200 Sobic001G054050 Sobic001G054050 Sobic007G085900--Sobic001G054050 Sobic006G057100--Sobic003G218950 Sobic006G057100--Sobic003G352000 Sobic006G057100--Sobic007G085900 SobicK029400 SobicK029400 Sobic006G057100--SobicK029400 Sobic006G057100--Sobic006G131700 Sobic003G113100 Sobic003G113100 Sobic006G057100--Sobic003G113100 Sobic003G369533 Sobic003G369533 Sobic006G057100--Sobic003G369533 Sobic006G057100--Sobic003G160400 Sobic010G185250 Sobic010G185250 Sobic006G057100--Sobic010G185250 Sobic003G160300--Sobic003G160433 Sobic003G160300--Sobic002G390200 Sobic003G160300--Sobic007G085900 Sobic003G160300--Sobic003G160400 Sobic003G160300--Sobic008G140050 Sobic005G216900 Sobic005G216900 Sobic003G160300--Sobic005G216900 Sobic003G160300--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic003G160300--Sobic002G180732 Sobic003G160300--Sobic001G054050 Sobic004G282933--Sobic009G192200 Sobic004G104200 Sobic004G104200 Sobic004G282933--Sobic004G104200 Sobic004G282933--Sobic007G085900 Sobic004G282933--Sobic008G140050 Sobic004G282933--Sobic003G160300 Sobic004G282933--Sobic002G390200 Sobic004G282933--Sobic001G054050 Sobic008G024900 Sobic008G024900 Sobic004G282933--Sobic008G024900 Sobic004G282933--Sobic003G160400 Sobic008G140050--Sobic007G085900 Sobic008G140050--Sobic003G160300 Sobic008G140050--Sobic003G160400 Sobic005G167100 Sobic005G167100 Sobic008G140050--Sobic005G167100 Sobic008G140050--Sobic003G352000 Sobic010G225400 Sobic010G225400 Sobic008G140050--Sobic010G225400 Sobic008G140050--Sobic002G390200 Sobic008G140050--SobicK029400 Sobic008G140050--Sobic009G192200 Sobic003G218950--Sobic006G057100 Sobic003G218950--Sobic003G369533 Sobic003G218950--Sobic003G352000 Sobic003G218950--SobicK029400 Sobic003G218950--Sobic006G131700 Sobic002G165200 Sobic002G165200 Sobic003G218950--Sobic002G165200 Sobic003G218950--Sobic007G085900 Sobic003G218950--Sobic003G113100 Sobic003G169000 Sobic003G169000 Sobic003G218950--Sobic003G169000 Sobic003G160433--Sobic003G160300 Sobic003G160433--Sobic002G390200 Sobic003G160433--Sobic007G085900 Sobic003G160433--Sobic001G128000 Sobic003G160433--Sobic005G216900 Sobic003G160433--Sobic002G180732 Sobic003G160433--Sobic003G160400 Sobic003G160433--Sobic001G054050 Sobic003G160433--Sobic008G140050 Sobic006G131700--Sobic003G218950 Sobic006G131700--Sobic003G113100 Sobic006G131700--Sobic006G057100 Sobic009G101500 Sobic009G101500 Sobic006G131700--Sobic009G101500 Sobic003G330350 Sobic003G330350 Sobic006G131700--Sobic003G330350 Sobic006G131700--Sobic009G192200 Sobic004G337850 Sobic004G337850 Sobic006G131700--Sobic004G337850 Sobic010G035600 Sobic010G035600 Sobic006G131700--Sobic010G035600 Sobic006G131700--Sobic002G165200 Sobic003G352000--SobicK029400 Sobic003G168200 Sobic003G168200 Sobic003G352000--Sobic003G168200 Sobic007G149200 Sobic007G149200 Sobic003G352000--Sobic007G149200 Sobic002G278100 Sobic002G278100 Sobic003G352000--Sobic002G278100 Sobic010G201266 Sobic010G201266 Sobic003G352000--Sobic010G201266 Sobic003G352000--Sobic006G057100 Sobic003G172400 Sobic003G172400 Sobic003G352000--Sobic003G172400 Sobic003G352000--Sobic003G369533 Sobic003G352000--Sobic003G218950
Octagon: transcription factors


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