Gene annotation
Transcriptome id Sobic.004G138400.2
Synonym Sb04g016540, WRKY11, ATWRKY11
Functional annotation WRKY51, expressed
UniProt A0A1Z5RMC8
Pfam PF10533 PF03106
Panther DB PTHR31282 PTHR31282:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G31550 : WRKY DNA-binding protein 11
RAP-DB (Rice) LOC_Os04g21950.1 : WRKY51, expressed
MaizeGDB (Corn) Zm00025a054955 , Zm00025a019876 , Zm00025a011909 , Zm00025a020284 , Zm00025a030906 , Zm00025a027709 , Zm00025a034393
Brachypodium KQJ84409 , KQJ82006 , KQJ95696 , KQK09741 , KQK09740
Barley HORVU4Hr1G012580.1 , HORVU3Hr1G039500.29 , HORVU3Hr1G039500.28 , HORVU3Hr1G039500.27 , HORVU3Hr1G039500.26 , HORVU3Hr1G039500.25 , HORVU3Hr1G039500.24 , HORVU3Hr1G039500.23 , HORVU3Hr1G039500.22 , HORVU3Hr1G039500.21 , HORVU3Hr1G039500.20 , HORVU4Hr1G012580.4 , HORVU4Hr1G012580.5 , HORVU4Hr1G012580.2 , HORVU4Hr1G012580.3 , HORVU1Hr1G092360.1 , HORVU1Hr1G092360.2 , HORVU5Hr1G015120.1 , HORVU3Hr1G039500.38 , HORVU3Hr1G039500.39 , HORVU3Hr1G039500.34 , HORVU3Hr1G039500.37 , HORVU3Hr1G039500.30 , HORVU3Hr1G039500.31 , HORVU3Hr1G039500.32 , HORVU3Hr1G039500.33 , HORVU2Hr1G101100.1 , HORVU2Hr1G101100.2 , HORVU3Hr1G039500.45 , HORVU3Hr1G039500.44 , HORVU3Hr1G039500.46 , HORVU3Hr1G039500.41 , HORVU3Hr1G039500.40 , HORVU3Hr1G039500.43 , HORVU3Hr1G039500.42 , HORVU3Hr1G039500.35 , HORVU3Hr1G039500.36 , HORVU2Hr1G065750.5 , HORVU2Hr1G065750.6 , HORVU2Hr1G065750.3 , HORVU2Hr1G065750.2 , HORVU3Hr1G039500.4 , HORVU3Hr1G039500.5 , HORVU3Hr1G039500.6 , HORVU3Hr1G039500.7 , HORVU3Hr1G039500.1 , HORVU3Hr1G039500.2 , HORVU3Hr1G039500.3 , HORVU3Hr1G039500.8 , HORVU3Hr1G039500.9 , HORVU3Hr1G071750.5 , HORVU3Hr1G071750.4 , HORVU3Hr1G071750.7 , HORVU3Hr1G071750.6 , HORVU3Hr1G071750.1 , HORVU3Hr1G071750.3 , HORVU3Hr1G039500.16 , HORVU3Hr1G039500.17 , HORVU3Hr1G039500.14 , HORVU3Hr1G039500.15 , HORVU3Hr1G039500.12 , HORVU3Hr1G039500.13 , HORVU3Hr1G039500.10 , HORVU3Hr1G039500.11 , HORVU3Hr1G039500.18 , HORVU3Hr1G039500.19
Wheat TraesCS2D02G431000 , TraesCS3A02G289700 , TraesCS3A02G289700 , TraesCS3B02G324400 , TraesCS3D02G289500 , TraesCS2D02G269200 , TraesCS2A02G270200 , TraesCS2A02G270200 , TraesCS1B02G455000 , TraesCS1D02G431600 , TraesCS2B02G289000 , TraesCS2B02G289000 , TraesCS2B02G454300 , TraesCS2B02G454300 , TraesCS2A02G433000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G325100 NB-ARC domain containing protein, expressed -
2 Sobic.009G111800 OsFBO5 - F-box and other domain containing protein, expressed -
3 Sobic.001G330925 - -
4 Sobic.002G202800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY62, expressed -
5 Sobic.004G106200 receptor-like kinase, putative, expressed -
6 Sobic.004G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
8 Sobic.001G321700 dehydration response related protein, putative, expressed -
9 Sobic.001G476100 expressed protein -
10 Sobic.002G064200 expressed protein -
11 Sobic.001G363200 expressed protein -
12 Sobic.003G258700 expressed protein -
13 Sobic.009G115500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.005G165900 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.002G354400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyol transporter 5, putative, expressed -
16 Sobic.003G401500 expressed protein -
17 Sobic.009G173800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RING-H2 finger protein, putative, expressed -
18 Sobic.004G160300 expressed protein -
19 Sobic.001G423600 avr9/Cf-9 rapidly elicited protein, putative, expressed -
20 Sobic.005G008101 - -


Gene co-expression network
sample Sobic004G138400 Sobic004G138400 Sobic003G325100 Sobic003G325100 Sobic004G138400--Sobic003G325100 Sobic009G111800 Sobic009G111800 Sobic004G138400--Sobic009G111800 Sobic001G330925 Sobic001G330925 Sobic004G138400--Sobic001G330925 Sobic002G202800 Sobic002G202800 Sobic004G138400--Sobic002G202800 Sobic004G106200 Sobic004G106200 Sobic004G138400--Sobic004G106200 Sobic004G109100 Sobic004G109100 Sobic004G138400--Sobic004G109100 Sobic003G242800 Sobic003G242800 Sobic004G138400--Sobic003G242800 Sobic001G321700 Sobic001G321700 Sobic004G138400--Sobic001G321700 Sobic001G476100 Sobic001G476100 Sobic004G138400--Sobic001G476100 Sobic003G325100--Sobic004G138400 Sobic003G325100--Sobic002G202800 Sobic010G004500 Sobic010G004500 Sobic003G325100--Sobic010G004500 Sobic002G064200 Sobic002G064200 Sobic003G325100--Sobic002G064200 Sobic008G095100 Sobic008G095100 Sobic003G325100--Sobic008G095100 Sobic003G325100--Sobic009G111800 Sobic003G325100--Sobic003G242800 Sobic003G325100--Sobic004G106200 Sobic001G059300 Sobic001G059300 Sobic003G325100--Sobic001G059300 Sobic002G025000 Sobic002G025000 Sobic009G111800--Sobic002G025000 Sobic009G111800--Sobic004G109100 Sobic009G111800--Sobic004G106200 Sobic009G111800--Sobic001G321700 Sobic005G008101 Sobic005G008101 Sobic009G111800--Sobic005G008101 Sobic007G149750 Sobic007G149750 Sobic009G111800--Sobic007G149750 Sobic010G091100 Sobic010G091100 Sobic009G111800--Sobic010G091100 Sobic003G325000 Sobic003G325000 Sobic009G111800--Sobic003G325000 Sobic009G111800--Sobic004G138400 Sobic001G330925--Sobic004G138400 Sobic001G330925--Sobic002G202800 Sobic009G115500 Sobic009G115500 Sobic001G330925--Sobic009G115500 Sobic002G214500 Sobic002G214500 Sobic001G330925--Sobic002G214500 Sobic003G401500 Sobic003G401500 Sobic001G330925--Sobic003G401500 Sobic001G330925--Sobic003G242800 Sobic001G330925--Sobic003G325100 Sobic003G258700 Sobic003G258700 Sobic001G330925--Sobic003G258700 Sobic002G354400 Sobic002G354400 Sobic001G330925--Sobic002G354400 Sobic002G202800--Sobic003G258700 Sobic002G202800--Sobic002G064200 Sobic002G202800--Sobic002G354400 Sobic002G202800--Sobic003G325100 Sobic003G037100 Sobic003G037100 Sobic002G202800--Sobic003G037100 Sobic002G202800--Sobic009G115500 Sobic002G202800--Sobic003G242800 Sobic001G363200 Sobic001G363200 Sobic002G202800--Sobic001G363200 Sobic002G202700 Sobic002G202700 Sobic002G202800--Sobic002G202700 Sobic004G106200--Sobic004G109100 Sobic004G106200--Sobic009G111800 Sobic002G130200 Sobic002G130200 Sobic004G106200--Sobic002G130200 Sobic004G106200--Sobic001G321700 Sobic010G065001 Sobic010G065001 Sobic004G106200--Sobic010G065001 Sobic008G108300 Sobic008G108300 Sobic004G106200--Sobic008G108300 Sobic010G254000 Sobic010G254000 Sobic004G106200--Sobic010G254000 Sobic009G148950 Sobic009G148950 Sobic004G106200--Sobic009G148950 Sobic003G169100 Sobic003G169100 Sobic004G106200--Sobic003G169100 Sobic004G109100--Sobic004G106200 Sobic004G109100--Sobic009G111800 Sobic010G046900 Sobic010G046900 Sobic004G109100--Sobic010G046900 Sobic004G109100--Sobic001G321700 Sobic004G109100--Sobic002G130200 Sobic005G060400 Sobic005G060400 Sobic004G109100--Sobic005G060400 Sobic004G109100--Sobic003G325000 Sobic004G109100--Sobic004G138400 Sobic004G109100--Sobic005G008101 Sobic003G242800--Sobic002G202800 Sobic003G242800--Sobic003G258700 Sobic003G242800--Sobic004G138400 Sobic003G242800--Sobic003G325100 Sobic003G242800--Sobic002G064200 Sobic005G165900 Sobic005G165900 Sobic003G242800--Sobic005G165900 Sobic004G160300 Sobic004G160300 Sobic003G242800--Sobic004G160300 Sobic003G242800--Sobic001G363200 Sobic003G242800--Sobic001G330925 Sobic001G321700--Sobic004G106200 Sobic001G321700--Sobic009G111800 Sobic001G321700--Sobic001G476100 Sobic001G321700--Sobic010G065001 Sobic001G321700--Sobic004G109100 Sobic001G319000 Sobic001G319000 Sobic001G321700--Sobic001G319000 Sobic008G081500 Sobic008G081500 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic004G242900 Sobic004G242900 Sobic001G321700--Sobic004G242900 Sobic001G476100--Sobic001G321700 Sobic001G476100--Sobic004G106200 Sobic001G476100--Sobic004G138400 Sobic001G476100--Sobic009G111800 Sobic001G476100--Sobic010G065001 Sobic001G476100--Sobic008G081500 Sobic001G476100--Sobic001G319000 Sobic003G403600 Sobic003G403600 Sobic001G476100--Sobic003G403600 Sobic005G097500 Sobic005G097500 Sobic001G476100--Sobic005G097500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.