Gene annotation
Transcriptome id Sobic.001G476100.1
Synonym Sb01g044610
Functional annotation expressed protein
UniProt A0A1B6QQ29
Pfam PF05340
Panther DB PTHR31659 PTHR31659:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G35210 : -
RAP-DB (Rice) LOC_Os03g08970.1 : expressed protein
MaizeGDB (Corn) Zm00025a001024 , Zm00025a053221
Brachypodium KQK23206
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G321700 dehydration response related protein, putative, expressed -
2 Sobic.004G106200 receptor-like kinase, putative, expressed -
3 Sobic.004G138400 WRKY51, expressed -
4 Sobic.009G111800 OsFBO5 - F-box and other domain containing protein, expressed -
5 Sobic.010G065001 - -
6 Sobic.008G081500 peptide transporter PTR3-A, putative, expressed -
7 Sobic.001G319000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.003G403600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.005G097500 expressed protein -
10 Sobic.001G501100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy-metal-associated domain-containing protein, putative, expressed -
11 Sobic.002G138400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
12 Sobic.003G255800 expressed protein -
13 Sobic.004G109100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.010G046900 embryogenesis transmembrane protein, putative, expressed -
15 Sobic.002G041900 transferase family protein, putative, expressed -
16 Sobic.003G064901 - -
17 Sobic.007G137501 - -
18 Sobic.005G060400 - -
19 Sobic.008G126800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G074200 - -


Gene co-expression network
sample Sobic001G476100 Sobic001G476100 Sobic001G321700 Sobic001G321700 Sobic001G476100--Sobic001G321700 Sobic004G106200 Sobic004G106200 Sobic001G476100--Sobic004G106200 Sobic004G138400 Sobic004G138400 Sobic001G476100--Sobic004G138400 Sobic009G111800 Sobic009G111800 Sobic001G476100--Sobic009G111800 Sobic010G065001 Sobic010G065001 Sobic001G476100--Sobic010G065001 Sobic008G081500 Sobic008G081500 Sobic001G476100--Sobic008G081500 Sobic001G319000 Sobic001G319000 Sobic001G476100--Sobic001G319000 Sobic003G403600 Sobic003G403600 Sobic001G476100--Sobic003G403600 Sobic005G097500 Sobic005G097500 Sobic001G476100--Sobic005G097500 Sobic001G321700--Sobic004G106200 Sobic001G321700--Sobic009G111800 Sobic001G321700--Sobic001G476100 Sobic001G321700--Sobic010G065001 Sobic004G109100 Sobic004G109100 Sobic001G321700--Sobic004G109100 Sobic001G321700--Sobic001G319000 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic004G242900 Sobic004G242900 Sobic001G321700--Sobic004G242900 Sobic004G106200--Sobic004G109100 Sobic004G106200--Sobic009G111800 Sobic002G130200 Sobic002G130200 Sobic004G106200--Sobic002G130200 Sobic004G106200--Sobic001G321700 Sobic004G106200--Sobic010G065001 Sobic008G108300 Sobic008G108300 Sobic004G106200--Sobic008G108300 Sobic010G254000 Sobic010G254000 Sobic004G106200--Sobic010G254000 Sobic009G148950 Sobic009G148950 Sobic004G106200--Sobic009G148950 Sobic003G169100 Sobic003G169100 Sobic004G106200--Sobic003G169100 Sobic003G325100 Sobic003G325100 Sobic004G138400--Sobic003G325100 Sobic004G138400--Sobic009G111800 Sobic001G330925 Sobic001G330925 Sobic004G138400--Sobic001G330925 Sobic002G202800 Sobic002G202800 Sobic004G138400--Sobic002G202800 Sobic004G138400--Sobic004G106200 Sobic004G138400--Sobic004G109100 Sobic003G242800 Sobic003G242800 Sobic004G138400--Sobic003G242800 Sobic004G138400--Sobic001G321700 Sobic004G138400--Sobic001G476100 Sobic002G025000 Sobic002G025000 Sobic009G111800--Sobic002G025000 Sobic009G111800--Sobic004G109100 Sobic009G111800--Sobic004G106200 Sobic009G111800--Sobic001G321700 Sobic005G008101 Sobic005G008101 Sobic009G111800--Sobic005G008101 Sobic007G149750 Sobic007G149750 Sobic009G111800--Sobic007G149750 Sobic010G091100 Sobic010G091100 Sobic009G111800--Sobic010G091100 Sobic003G325000 Sobic003G325000 Sobic009G111800--Sobic003G325000 Sobic009G111800--Sobic004G138400 Sobic005G096450 Sobic005G096450 Sobic010G065001--Sobic005G096450 Sobic007G137501 Sobic007G137501 Sobic010G065001--Sobic007G137501 Sobic004G091900 Sobic004G091900 Sobic010G065001--Sobic004G091900 Sobic003G064901 Sobic003G064901 Sobic010G065001--Sobic003G064901 Sobic001G011600 Sobic001G011600 Sobic010G065001--Sobic001G011600 Sobic007G149200 Sobic007G149200 Sobic010G065001--Sobic007G149200 Sobic005G116400 Sobic005G116400 Sobic010G065001--Sobic005G116400 Sobic003G369533 Sobic003G369533 Sobic010G065001--Sobic003G369533 Sobic010G065001--Sobic003G169100 Sobic008G081500--Sobic001G321700 Sobic007G123700 Sobic007G123700 Sobic008G081500--Sobic007G123700 Sobic008G081500--Sobic009G111800 Sobic010G278900 Sobic010G278900 Sobic008G081500--Sobic010G278900 Sobic008G081500--Sobic010G091100 Sobic008G081500--Sobic010G065001 Sobic010G127600 Sobic010G127600 Sobic008G081500--Sobic010G127600 Sobic001G128000 Sobic001G128000 Sobic008G081500--Sobic001G128000 Sobic002G180732 Sobic002G180732 Sobic008G081500--Sobic002G180732 Sobic008G126800 Sobic008G126800 Sobic001G319000--Sobic008G126800 Sobic001G319000--Sobic005G097500 Sobic003G255800 Sobic003G255800 Sobic001G319000--Sobic003G255800 Sobic001G319000--Sobic001G321700 Sobic001G319000--Sobic003G403600 Sobic001G319000--Sobic010G065001 Sobic007G089400 Sobic007G089400 Sobic001G319000--Sobic007G089400 Sobic010G193100 Sobic010G193100 Sobic001G319000--Sobic010G193100 Sobic006G202900 Sobic006G202900 Sobic001G319000--Sobic006G202900 Sobic003G403600--Sobic010G065001 Sobic003G403600--Sobic005G097500 Sobic003G403600--Sobic006G202900 Sobic008G007500 Sobic008G007500 Sobic003G403600--Sobic008G007500 Sobic003G403600--Sobic004G091900 Sobic003G403600--Sobic010G193100 Sobic008G029000 Sobic008G029000 Sobic003G403600--Sobic008G029000 Sobic003G403600--Sobic005G096450 Sobic003G403600--Sobic003G064901 Sobic005G097500--Sobic006G202900 Sobic003G003300 Sobic003G003300 Sobic005G097500--Sobic003G003300 Sobic005G097500--Sobic003G403600 Sobic005G097500--Sobic008G029000 Sobic005G097500--Sobic010G193100 Sobic005G097500--Sobic008G007500 Sobic005G097500--Sobic001G319000 Sobic002G190600 Sobic002G190600 Sobic005G097500--Sobic002G190600 Sobic010G018200 Sobic010G018200 Sobic005G097500--Sobic010G018200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.