Gene annotation
Transcriptome id Sobic.001G501100.1
Synonym FP3, ATFP3, Sb01g046820
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
heavy-metal-associated domain-containing protein, putative, expressed
UniProt A0A1B6QQG4
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF143
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36950 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os03g05750.1 : heavy-metal-associated domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006806 , Zm00025a011750 , Zm00025a035151 , Zm00025a017722 , Zm00025a055907 , Zm00025a011977 , Zm00025a053432 , Zm00025a000695
Brachypodium KQJ82290 , KQJ96875 , PNT78181 , KQK23609 , KQJ81970 , PNT60922
Barley HORVU4Hr1G072060.7 , HORVU4Hr1G072060.2 , HORVU4Hr1G072060.11 , HORVU4Hr1G072060.10 , HORVU4Hr1G072060.13 , HORVU4Hr1G072060.12 , HORVU4Hr1G072060.15 , HORVU4Hr1G072060.14 , HORVU4Hr1G072060.16 , HORVU5Hr1G125030.5 , HORVU2Hr1G011060.1 , HORVU1Hr1G036920.1 , HORVU1Hr1G036920.2 , HORVU4Hr1G072060.5 , HORVU4Hr1G072060.4 , HORVU4Hr1G072060.6 , HORVU4Hr1G072060.1 , HORVU4Hr1G072060.3 , HORVU4Hr1G072060.9 , HORVU4Hr1G072060.8 , HORVU5Hr1G125030.4 , HORVU5Hr1G125030.6 , HORVU5Hr1G125030.1 , HORVU5Hr1G125030.2 , HORVU5Hr1G125030.3
Wheat TraesCS1B02G157000 , TraesCS4D02G268000 , TraesCS1A02G139900 , TraesCS1A02G139900 , TraesCS2B02G077100 , TraesCS4B02G268700 , TraesCS4B02G268700 , TraesCS4B02G268700 , TraesCS1D02G139400 , TraesCS4A02G035900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G177901 - -
2 Sobic.001G118600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@DnaK family protein, putative, expressed K09490: HSPA5, endoplasmic reticulum chaperone BiP
3 Sobic.001G476100 expressed protein -
4 Sobic.004G299850 - -
5 Sobic.001G321700 dehydration response related protein, putative, expressed -
6 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -
7 Sobic.006G073300 RNA recognition motif containing protein, putative, expressed -
8 Sobic.003G380800 expressed protein -
9 Sobic.008G104400 ZOS12-05 - C2H2 zinc finger protein, expressed K09506: DnaJ homolog subfamily A member 5
10 Sobic.003G386400 - -
11 Sobic.007G077300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.009G074200 - -
13 Sobic.005G030266 - -
14 Sobic.005G068200 expressed protein -
15 Sobic.001G144001 - -
16 Sobic.001G302100 holliday junction resolvase, putative, expressed K07447: putative holliday junction resolvase
17 Sobic.003G325000 expressed protein -
18 Sobic.007G137501 - -
19 Sobic.001G098000 kinase, pfkB family, putative, expressed -
20 Sobic.002G257150 - -


Gene co-expression network
sample Sobic001G501100 Sobic001G501100 Sobic009G177901 Sobic009G177901 Sobic001G501100--Sobic009G177901 Sobic001G118600 Sobic001G118600 Sobic001G501100--Sobic001G118600 Sobic001G476100 Sobic001G476100 Sobic001G501100--Sobic001G476100 Sobic004G299850 Sobic004G299850 Sobic001G501100--Sobic004G299850 Sobic001G321700 Sobic001G321700 Sobic001G501100--Sobic001G321700 Sobic002G373900 Sobic002G373900 Sobic001G501100--Sobic002G373900 Sobic006G073300 Sobic006G073300 Sobic001G501100--Sobic006G073300 Sobic003G380800 Sobic003G380800 Sobic001G501100--Sobic003G380800 Sobic008G104400 Sobic008G104400 Sobic001G501100--Sobic008G104400 Sobic002G275400 Sobic002G275400 Sobic009G177901--Sobic002G275400 Sobic004G125600 Sobic004G125600 Sobic009G177901--Sobic004G125600 Sobic009G177901--Sobic004G299850 Sobic004G125701 Sobic004G125701 Sobic009G177901--Sobic004G125701 Sobic003G159000 Sobic003G159000 Sobic009G177901--Sobic003G159000 Sobic006G258600 Sobic006G258600 Sobic009G177901--Sobic006G258600 Sobic009G177901--Sobic008G104400 Sobic003G137300 Sobic003G137300 Sobic009G177901--Sobic003G137300 Sobic005G068200 Sobic005G068200 Sobic009G177901--Sobic005G068200 Sobic005G126900 Sobic005G126900 Sobic001G118600--Sobic005G126900 Sobic004G208000 Sobic004G208000 Sobic001G118600--Sobic004G208000 Sobic005G167450 Sobic005G167450 Sobic001G118600--Sobic005G167450 Sobic004G044401 Sobic004G044401 Sobic001G118600--Sobic004G044401 Sobic001G217800 Sobic001G217800 Sobic001G118600--Sobic001G217800 Sobic001G118600--Sobic002G275400 Sobic003G412500 Sobic003G412500 Sobic001G118600--Sobic003G412500 Sobic001G118600--Sobic002G373900 Sobic005G101400 Sobic005G101400 Sobic001G118600--Sobic005G101400 Sobic001G476100--Sobic001G321700 Sobic004G106200 Sobic004G106200 Sobic001G476100--Sobic004G106200 Sobic004G138400 Sobic004G138400 Sobic001G476100--Sobic004G138400 Sobic009G111800 Sobic009G111800 Sobic001G476100--Sobic009G111800 Sobic010G065001 Sobic010G065001 Sobic001G476100--Sobic010G065001 Sobic008G081500 Sobic008G081500 Sobic001G476100--Sobic008G081500 Sobic001G319000 Sobic001G319000 Sobic001G476100--Sobic001G319000 Sobic003G403600 Sobic003G403600 Sobic001G476100--Sobic003G403600 Sobic005G097500 Sobic005G097500 Sobic001G476100--Sobic005G097500 Sobic009G029100 Sobic009G029100 Sobic004G299850--Sobic009G029100 Sobic001G167000 Sobic001G167000 Sobic004G299850--Sobic001G167000 Sobic004G299850--Sobic003G412500 Sobic001G011600 Sobic001G011600 Sobic004G299850--Sobic001G011600 Sobic003G330350 Sobic003G330350 Sobic004G299850--Sobic003G330350 Sobic004G299850--Sobic006G258600 Sobic002G012100 Sobic002G012100 Sobic004G299850--Sobic002G012100 Sobic006G130100 Sobic006G130100 Sobic004G299850--Sobic006G130100 Sobic006G131700 Sobic006G131700 Sobic004G299850--Sobic006G131700 Sobic001G321700--Sobic004G106200 Sobic001G321700--Sobic009G111800 Sobic001G321700--Sobic001G476100 Sobic001G321700--Sobic010G065001 Sobic004G109100 Sobic004G109100 Sobic001G321700--Sobic004G109100 Sobic001G321700--Sobic001G319000 Sobic001G321700--Sobic008G081500 Sobic009G074200 Sobic009G074200 Sobic001G321700--Sobic009G074200 Sobic004G242900 Sobic004G242900 Sobic001G321700--Sobic004G242900 Sobic006G233800 Sobic006G233800 Sobic002G373900--Sobic006G233800 Sobic004G191901 Sobic004G191901 Sobic002G373900--Sobic004G191901 Sobic002G373900--Sobic009G074200 Sobic003G249500 Sobic003G249500 Sobic002G373900--Sobic003G249500 Sobic002G385601 Sobic002G385601 Sobic002G373900--Sobic002G385601 Sobic003G352000 Sobic003G352000 Sobic002G373900--Sobic003G352000 Sobic001G450900 Sobic001G450900 Sobic002G373900--Sobic001G450900 SobicK029400 SobicK029400 Sobic002G373900--SobicK029400 Sobic006G057100 Sobic006G057100 Sobic002G373900--Sobic006G057100 Sobic005G132100 Sobic005G132100 Sobic006G073300--Sobic005G132100 Sobic002G257150 Sobic002G257150 Sobic006G073300--Sobic002G257150 Sobic008G007500 Sobic008G007500 Sobic006G073300--Sobic008G007500 Sobic004G242800 Sobic004G242800 Sobic006G073300--Sobic004G242800 Sobic005G187800 Sobic005G187800 Sobic006G073300--Sobic005G187800 Sobic003G064901 Sobic003G064901 Sobic006G073300--Sobic003G064901 Sobic002G076300 Sobic002G076300 Sobic006G073300--Sobic002G076300 Sobic001G144001 Sobic001G144001 Sobic006G073300--Sobic001G144001 Sobic001G329001 Sobic001G329001 Sobic006G073300--Sobic001G329001 Sobic005G030266 Sobic005G030266 Sobic003G380800--Sobic005G030266 Sobic003G380800--Sobic005G068200 Sobic001G249900 Sobic001G249900 Sobic003G380800--Sobic001G249900 Sobic003G380800--Sobic006G130100 Sobic006G093550 Sobic006G093550 Sobic003G380800--Sobic006G093550 Sobic004G234766 Sobic004G234766 Sobic003G380800--Sobic004G234766 Sobic010G107901 Sobic010G107901 Sobic003G380800--Sobic010G107901 Sobic001G054050 Sobic001G054050 Sobic003G380800--Sobic001G054050 Sobic003G172450 Sobic003G172450 Sobic003G380800--Sobic003G172450 Sobic001G517900 Sobic001G517900 Sobic008G104400--Sobic001G517900 Sobic008G187500 Sobic008G187500 Sobic008G104400--Sobic008G187500 Sobic006G134300 Sobic006G134300 Sobic008G104400--Sobic006G134300 Sobic003G386400 Sobic003G386400 Sobic008G104400--Sobic003G386400 Sobic009G175800 Sobic009G175800 Sobic008G104400--Sobic009G175800 Sobic006G268900 Sobic006G268900 Sobic008G104400--Sobic006G268900 Sobic002G287600 Sobic002G287600 Sobic008G104400--Sobic002G287600 Sobic003G410000 Sobic003G410000 Sobic008G104400--Sobic003G410000 Sobic003G347560 Sobic003G347560 Sobic008G104400--Sobic003G347560
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.